GO Enrichment Analysis of Co-expressed Genes with
AT3G53470
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1901918: negative regulation of exoribonuclease activity | 0.00E+00 |
| 2 | GO:0098586: cellular response to virus | 0.00E+00 |
| 3 | GO:0017009: protein-phycocyanobilin linkage | 0.00E+00 |
| 4 | GO:2000042: negative regulation of double-strand break repair via homologous recombination | 0.00E+00 |
| 5 | GO:0005996: monosaccharide metabolic process | 0.00E+00 |
| 6 | GO:0046471: phosphatidylglycerol metabolic process | 0.00E+00 |
| 7 | GO:0010207: photosystem II assembly | 1.76E-05 |
| 8 | GO:0010600: regulation of auxin biosynthetic process | 2.16E-05 |
| 9 | GO:0010244: response to low fluence blue light stimulus by blue low-fluence system | 7.27E-05 |
| 10 | GO:0009658: chloroplast organization | 1.20E-04 |
| 11 | GO:0009704: de-etiolation | 1.25E-04 |
| 12 | GO:0010928: regulation of auxin mediated signaling pathway | 1.25E-04 |
| 13 | GO:0032544: plastid translation | 1.56E-04 |
| 14 | GO:0051180: vitamin transport | 1.67E-04 |
| 15 | GO:0030974: thiamine pyrophosphate transport | 1.67E-04 |
| 16 | GO:0046467: membrane lipid biosynthetic process | 1.67E-04 |
| 17 | GO:0043007: maintenance of rDNA | 1.67E-04 |
| 18 | GO:0019510: S-adenosylhomocysteine catabolic process | 1.67E-04 |
| 19 | GO:0071277: cellular response to calcium ion | 1.67E-04 |
| 20 | GO:0006098: pentose-phosphate shunt | 1.91E-04 |
| 21 | GO:0010205: photoinhibition | 2.29E-04 |
| 22 | GO:0018298: protein-chromophore linkage | 3.00E-04 |
| 23 | GO:0035304: regulation of protein dephosphorylation | 3.78E-04 |
| 24 | GO:0033353: S-adenosylmethionine cycle | 3.78E-04 |
| 25 | GO:0008616: queuosine biosynthetic process | 3.78E-04 |
| 26 | GO:0046741: transport of virus in host, tissue to tissue | 3.78E-04 |
| 27 | GO:0015893: drug transport | 3.78E-04 |
| 28 | GO:0006094: gluconeogenesis | 4.10E-04 |
| 29 | GO:0006636: unsaturated fatty acid biosynthetic process | 5.76E-04 |
| 30 | GO:0044375: regulation of peroxisome size | 6.19E-04 |
| 31 | GO:0006081: cellular aldehyde metabolic process | 6.19E-04 |
| 32 | GO:0009768: photosynthesis, light harvesting in photosystem I | 7.02E-04 |
| 33 | GO:0009585: red, far-red light phototransduction | 8.23E-04 |
| 34 | GO:0043572: plastid fission | 8.83E-04 |
| 35 | GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis | 8.83E-04 |
| 36 | GO:0019722: calcium-mediated signaling | 9.89E-04 |
| 37 | GO:0006096: glycolytic process | 1.01E-03 |
| 38 | GO:0006546: glycine catabolic process | 1.17E-03 |
| 39 | GO:0015689: molybdate ion transport | 1.17E-03 |
| 40 | GO:0019464: glycine decarboxylation via glycine cleavage system | 1.17E-03 |
| 41 | GO:0009765: photosynthesis, light harvesting | 1.17E-03 |
| 42 | GO:0045727: positive regulation of translation | 1.17E-03 |
| 43 | GO:0015994: chlorophyll metabolic process | 1.17E-03 |
| 44 | GO:0015979: photosynthesis | 1.33E-03 |
| 45 | GO:0009107: lipoate biosynthetic process | 1.48E-03 |
| 46 | GO:0006465: signal peptide processing | 1.48E-03 |
| 47 | GO:0032502: developmental process | 1.62E-03 |
| 48 | GO:0006086: acetyl-CoA biosynthetic process from pyruvate | 1.83E-03 |
| 49 | GO:0042549: photosystem II stabilization | 1.83E-03 |
| 50 | GO:0007267: cell-cell signaling | 1.95E-03 |
| 51 | GO:0006810: transport | 2.06E-03 |
| 52 | GO:0055114: oxidation-reduction process | 2.09E-03 |
| 53 | GO:0045926: negative regulation of growth | 2.19E-03 |
| 54 | GO:0017148: negative regulation of translation | 2.19E-03 |
| 55 | GO:0010189: vitamin E biosynthetic process | 2.19E-03 |
| 56 | GO:0010411: xyloglucan metabolic process | 2.56E-03 |
| 57 | GO:0015995: chlorophyll biosynthetic process | 2.56E-03 |
| 58 | GO:1900057: positive regulation of leaf senescence | 2.58E-03 |
| 59 | GO:0009645: response to low light intensity stimulus | 2.58E-03 |
| 60 | GO:0010161: red light signaling pathway | 2.58E-03 |
| 61 | GO:0009690: cytokinin metabolic process | 2.99E-03 |
| 62 | GO:0016559: peroxisome fission | 2.99E-03 |
| 63 | GO:0042255: ribosome assembly | 2.99E-03 |
| 64 | GO:0006353: DNA-templated transcription, termination | 2.99E-03 |
| 65 | GO:0010218: response to far red light | 3.12E-03 |
| 66 | GO:0006526: arginine biosynthetic process | 3.41E-03 |
| 67 | GO:0071482: cellular response to light stimulus | 3.41E-03 |
| 68 | GO:0009657: plastid organization | 3.41E-03 |
| 69 | GO:0009637: response to blue light | 3.58E-03 |
| 70 | GO:0009821: alkaloid biosynthetic process | 3.86E-03 |
| 71 | GO:0090305: nucleic acid phosphodiester bond hydrolysis | 3.86E-03 |
| 72 | GO:0090333: regulation of stomatal closure | 3.86E-03 |
| 73 | GO:0010114: response to red light | 4.61E-03 |
| 74 | GO:0042546: cell wall biogenesis | 4.80E-03 |
| 75 | GO:0043069: negative regulation of programmed cell death | 4.81E-03 |
| 76 | GO:0019684: photosynthesis, light reaction | 5.32E-03 |
| 77 | GO:0000272: polysaccharide catabolic process | 5.32E-03 |
| 78 | GO:0018119: peptidyl-cysteine S-nitrosylation | 5.32E-03 |
| 79 | GO:0009773: photosynthetic electron transport in photosystem I | 5.32E-03 |
| 80 | GO:0018107: peptidyl-threonine phosphorylation | 6.38E-03 |
| 81 | GO:0009725: response to hormone | 6.38E-03 |
| 82 | GO:0009767: photosynthetic electron transport chain | 6.38E-03 |
| 83 | GO:0010020: chloroplast fission | 6.93E-03 |
| 84 | GO:0007031: peroxisome organization | 7.50E-03 |
| 85 | GO:0019762: glucosinolate catabolic process | 8.10E-03 |
| 86 | GO:0032259: methylation | 9.00E-03 |
| 87 | GO:0006396: RNA processing | 9.10E-03 |
| 88 | GO:0051302: regulation of cell division | 9.33E-03 |
| 89 | GO:0031408: oxylipin biosynthetic process | 9.97E-03 |
| 90 | GO:0030433: ubiquitin-dependent ERAD pathway | 1.06E-02 |
| 91 | GO:0010017: red or far-red light signaling pathway | 1.06E-02 |
| 92 | GO:0006730: one-carbon metabolic process | 1.06E-02 |
| 93 | GO:0009693: ethylene biosynthetic process | 1.13E-02 |
| 94 | GO:0006817: phosphate ion transport | 1.20E-02 |
| 95 | GO:0009306: protein secretion | 1.20E-02 |
| 96 | GO:0006606: protein import into nucleus | 1.34E-02 |
| 97 | GO:0042631: cellular response to water deprivation | 1.34E-02 |
| 98 | GO:0006520: cellular amino acid metabolic process | 1.41E-02 |
| 99 | GO:0048868: pollen tube development | 1.41E-02 |
| 100 | GO:0009741: response to brassinosteroid | 1.41E-02 |
| 101 | GO:0007623: circadian rhythm | 1.53E-02 |
| 102 | GO:0000302: response to reactive oxygen species | 1.64E-02 |
| 103 | GO:0010583: response to cyclopentenone | 1.72E-02 |
| 104 | GO:0009788: negative regulation of abscisic acid-activated signaling pathway | 2.22E-02 |
| 105 | GO:0046686: response to cadmium ion | 2.64E-02 |
| 106 | GO:0007568: aging | 2.85E-02 |
| 107 | GO:0034599: cellular response to oxidative stress | 3.14E-02 |
| 108 | GO:0006839: mitochondrial transport | 3.34E-02 |
| 109 | GO:0006631: fatty acid metabolic process | 3.44E-02 |
| 110 | GO:0009744: response to sucrose | 3.65E-02 |
| 111 | GO:0000209: protein polyubiquitination | 3.75E-02 |
| 112 | GO:0009644: response to high light intensity | 3.86E-02 |
| 113 | GO:0006281: DNA repair | 4.34E-02 |
| 114 | GO:0006364: rRNA processing | 4.51E-02 |
| 115 | GO:0006417: regulation of translation | 4.84E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0045550: geranylgeranyl reductase activity | 0.00E+00 |
| 2 | GO:0009979: 16:0 monogalactosyldiacylglycerol desaturase activity | 0.00E+00 |
| 3 | GO:0102193: protein-ribulosamine 3-kinase activity | 0.00E+00 |
| 4 | GO:0052637: delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase activity | 0.00E+00 |
| 5 | GO:0046863: ribulose-1,5-bisphosphate carboxylase/oxygenase activator activity | 0.00E+00 |
| 6 | GO:0009673: low-affinity phosphate transmembrane transporter activity | 0.00E+00 |
| 7 | GO:0018708: thiol S-methyltransferase activity | 1.35E-06 |
| 8 | GO:0004565: beta-galactosidase activity | 1.43E-05 |
| 9 | GO:0016491: oxidoreductase activity | 1.67E-05 |
| 10 | GO:0004332: fructose-bisphosphate aldolase activity | 5.21E-05 |
| 11 | GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity | 1.67E-04 |
| 12 | GO:0030794: (S)-coclaurine-N-methyltransferase activity | 1.67E-04 |
| 13 | GO:0090422: thiamine pyrophosphate transporter activity | 1.67E-04 |
| 14 | GO:0004013: adenosylhomocysteinase activity | 1.67E-04 |
| 15 | GO:0080132: fatty acid alpha-hydroxylase activity | 1.67E-04 |
| 16 | GO:0010242: oxygen evolving activity | 1.67E-04 |
| 17 | GO:0010313: phytochrome binding | 1.67E-04 |
| 18 | GO:0004802: transketolase activity | 3.78E-04 |
| 19 | GO:0047746: chlorophyllase activity | 3.78E-04 |
| 20 | GO:0010297: heteropolysaccharide binding | 3.78E-04 |
| 21 | GO:0008479: queuine tRNA-ribosyltransferase activity | 3.78E-04 |
| 22 | GO:0031409: pigment binding | 5.76E-04 |
| 23 | GO:0004030: aldehyde dehydrogenase [NAD(P)+] activity | 6.19E-04 |
| 24 | GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | 6.19E-04 |
| 25 | GO:0010277: chlorophyllide a oxygenase [overall] activity | 6.19E-04 |
| 26 | GO:0016992: lipoate synthase activity | 6.19E-04 |
| 27 | GO:0003913: DNA photolyase activity | 6.19E-04 |
| 28 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 8.83E-04 |
| 29 | GO:0048027: mRNA 5'-UTR binding | 8.83E-04 |
| 30 | GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | 8.83E-04 |
| 31 | GO:0003727: single-stranded RNA binding | 9.89E-04 |
| 32 | GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity | 1.17E-03 |
| 33 | GO:0015098: molybdate ion transmembrane transporter activity | 1.17E-03 |
| 34 | GO:0008080: N-acetyltransferase activity | 1.24E-03 |
| 35 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 1.52E-03 |
| 36 | GO:0048038: quinone binding | 1.52E-03 |
| 37 | GO:0004518: nuclease activity | 1.62E-03 |
| 38 | GO:0019843: rRNA binding | 1.69E-03 |
| 39 | GO:0004029: aldehyde dehydrogenase (NAD) activity | 1.83E-03 |
| 40 | GO:0016168: chlorophyll binding | 2.30E-03 |
| 41 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 2.56E-03 |
| 42 | GO:0009881: photoreceptor activity | 2.58E-03 |
| 43 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 3.41E-03 |
| 44 | GO:0042802: identical protein binding | 3.43E-03 |
| 45 | GO:0071949: FAD binding | 3.86E-03 |
| 46 | GO:0008168: methyltransferase activity | 4.20E-03 |
| 47 | GO:0016844: strictosidine synthase activity | 4.33E-03 |
| 48 | GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity | 4.33E-03 |
| 49 | GO:0030234: enzyme regulator activity | 4.81E-03 |
| 50 | GO:0051287: NAD binding | 5.58E-03 |
| 51 | GO:0005315: inorganic phosphate transmembrane transporter activity | 6.38E-03 |
| 52 | GO:0031072: heat shock protein binding | 6.38E-03 |
| 53 | GO:0003690: double-stranded DNA binding | 6.43E-03 |
| 54 | GO:0008266: poly(U) RNA binding | 6.93E-03 |
| 55 | GO:0004871: signal transducer activity | 7.73E-03 |
| 56 | GO:0003954: NADH dehydrogenase activity | 8.70E-03 |
| 57 | GO:0005528: FK506 binding | 8.70E-03 |
| 58 | GO:0008565: protein transporter activity | 1.33E-02 |
| 59 | GO:0050662: coenzyme binding | 1.49E-02 |
| 60 | GO:0010181: FMN binding | 1.49E-02 |
| 61 | GO:0004872: receptor activity | 1.56E-02 |
| 62 | GO:0046983: protein dimerization activity | 2.11E-02 |
| 63 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 2.48E-02 |
| 64 | GO:0052689: carboxylic ester hydrolase activity | 3.26E-02 |
| 65 | GO:0051537: 2 iron, 2 sulfur cluster binding | 3.86E-02 |
| 66 | GO:0043621: protein self-association | 3.86E-02 |
| 67 | GO:0035091: phosphatidylinositol binding | 3.86E-02 |
| 68 | GO:0015293: symporter activity | 3.96E-02 |
| 69 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 4.07E-02 |
| 70 | GO:0031625: ubiquitin protein ligase binding | 4.84E-02 |