Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G52480

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0001789: G-protein coupled receptor signaling pathway, coupled to S1P second messenger0.00E+00
2GO:1900409: positive regulation of cellular response to oxidative stress0.00E+00
3GO:0046256: 2,4,6-trinitrotoluene catabolic process7.75E-05
4GO:0003400: regulation of COPII vesicle coating7.75E-05
5GO:0031338: regulation of vesicle fusion7.75E-05
6GO:0071806: protein transmembrane transport7.75E-05
7GO:0071280: cellular response to copper ion7.75E-05
8GO:0015031: protein transport1.75E-04
9GO:1901703: protein localization involved in auxin polar transport1.85E-04
10GO:0080026: response to indolebutyric acid1.85E-04
11GO:0071457: cellular response to ozone1.85E-04
12GO:0006501: C-terminal protein lipidation1.85E-04
13GO:0015865: purine nucleotide transport1.85E-04
14GO:1902000: homogentisate catabolic process1.85E-04
15GO:2000693: positive regulation of seed maturation1.85E-04
16GO:0042814: monopolar cell growth1.85E-04
17GO:0006123: mitochondrial electron transport, cytochrome c to oxygen1.85E-04
18GO:0009072: aromatic amino acid family metabolic process3.11E-04
19GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway3.11E-04
20GO:0009062: fatty acid catabolic process3.11E-04
21GO:0090630: activation of GTPase activity3.11E-04
22GO:0040009: regulation of growth rate3.11E-04
23GO:0072661: protein targeting to plasma membrane3.11E-04
24GO:0006571: tyrosine biosynthetic process4.49E-04
25GO:0071484: cellular response to light intensity4.49E-04
26GO:0046902: regulation of mitochondrial membrane permeability4.49E-04
27GO:0071329: cellular response to sucrose stimulus4.49E-04
28GO:0080024: indolebutyric acid metabolic process4.49E-04
29GO:0070676: intralumenal vesicle formation4.49E-04
30GO:0001676: long-chain fatty acid metabolic process4.49E-04
31GO:0046836: glycolipid transport4.49E-04
32GO:0010193: response to ozone5.60E-04
33GO:0000919: cell plate assembly5.98E-04
34GO:0042594: response to starvation5.98E-04
35GO:0044804: nucleophagy5.98E-04
36GO:0006914: autophagy6.75E-04
37GO:0018344: protein geranylgeranylation7.57E-04
38GO:0030308: negative regulation of cell growth7.57E-04
39GO:0071493: cellular response to UV-B7.57E-04
40GO:0009164: nucleoside catabolic process7.57E-04
41GO:0016131: brassinosteroid metabolic process7.57E-04
42GO:0000422: mitophagy7.57E-04
43GO:0009788: negative regulation of abscisic acid-activated signaling pathway8.43E-04
44GO:0009920: cell plate formation involved in plant-type cell wall biogenesis9.24E-04
45GO:0009228: thiamine biosynthetic process9.24E-04
46GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione9.24E-04
47GO:0000045: autophagosome assembly9.24E-04
48GO:0060918: auxin transport9.24E-04
49GO:0008219: cell death1.03E-03
50GO:0010244: response to low fluence blue light stimulus by blue low-fluence system1.10E-03
51GO:0009094: L-phenylalanine biosynthetic process1.10E-03
52GO:0006694: steroid biosynthetic process1.10E-03
53GO:0009407: toxin catabolic process1.13E-03
54GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c1.29E-03
55GO:0006887: exocytosis1.52E-03
56GO:0016192: vesicle-mediated transport1.64E-03
57GO:0007186: G-protein coupled receptor signaling pathway1.69E-03
58GO:0019430: removal of superoxide radicals1.69E-03
59GO:0009636: response to toxic substance1.85E-03
60GO:0009051: pentose-phosphate shunt, oxidative branch1.91E-03
61GO:0090333: regulation of stomatal closure1.91E-03
62GO:0030042: actin filament depolymerization2.14E-03
63GO:0048354: mucilage biosynthetic process involved in seed coat development2.14E-03
64GO:0006995: cellular response to nitrogen starvation2.37E-03
65GO:0072593: reactive oxygen species metabolic process2.61E-03
66GO:0071365: cellular response to auxin stimulus2.86E-03
67GO:0010102: lateral root morphogenesis3.12E-03
68GO:0009785: blue light signaling pathway3.12E-03
69GO:0006626: protein targeting to mitochondrion3.12E-03
70GO:0006006: glucose metabolic process3.12E-03
71GO:0007034: vacuolar transport3.38E-03
72GO:0010540: basipetal auxin transport3.38E-03
73GO:0009266: response to temperature stimulus3.38E-03
74GO:0046688: response to copper ion3.66E-03
75GO:0010039: response to iron ion3.66E-03
76GO:0030150: protein import into mitochondrial matrix4.23E-03
77GO:0009269: response to desiccation4.82E-03
78GO:0071215: cellular response to abscisic acid stimulus5.45E-03
79GO:0006817: phosphate ion transport5.77E-03
80GO:0042127: regulation of cell proliferation5.77E-03
81GO:0009306: protein secretion5.77E-03
82GO:0009789: positive regulation of abscisic acid-activated signaling pathway6.10E-03
83GO:0071472: cellular response to salt stress6.78E-03
84GO:0009749: response to glucose7.49E-03
85GO:0006635: fatty acid beta-oxidation7.85E-03
86GO:0032502: developmental process8.22E-03
87GO:0009630: gravitropism8.22E-03
88GO:0010252: auxin homeostasis8.97E-03
89GO:0006464: cellular protein modification process8.97E-03
90GO:0006904: vesicle docking involved in exocytosis9.36E-03
91GO:0010027: thylakoid membrane organization1.02E-02
92GO:0009816: defense response to bacterium, incompatible interaction1.06E-02
93GO:0006906: vesicle fusion1.10E-02
94GO:0006888: ER to Golgi vesicle-mediated transport1.14E-02
95GO:0006950: response to stress1.14E-02
96GO:0048767: root hair elongation1.27E-02
97GO:0010311: lateral root formation1.27E-02
98GO:0006499: N-terminal protein myristoylation1.31E-02
99GO:0010119: regulation of stomatal movement1.36E-02
100GO:0009853: photorespiration1.45E-02
101GO:0035195: gene silencing by miRNA1.45E-02
102GO:0016051: carbohydrate biosynthetic process1.45E-02
103GO:0009733: response to auxin1.47E-02
104GO:0016567: protein ubiquitination1.49E-02
105GO:0034599: cellular response to oxidative stress1.49E-02
106GO:0006839: mitochondrial transport1.59E-02
107GO:0048364: root development1.59E-02
108GO:0055114: oxidation-reduction process1.62E-02
109GO:0006631: fatty acid metabolic process1.64E-02
110GO:0008283: cell proliferation1.73E-02
111GO:0009926: auxin polar transport1.73E-02
112GO:0006855: drug transmembrane transport1.93E-02
113GO:0031347: regulation of defense response1.98E-02
114GO:0009809: lignin biosynthetic process2.14E-02
115GO:0009740: gibberellic acid mediated signaling pathway2.64E-02
116GO:0009742: brassinosteroid mediated signaling pathway2.87E-02
117GO:0000398: mRNA splicing, via spliceosome3.05E-02
118GO:0009058: biosynthetic process3.35E-02
119GO:0009845: seed germination3.42E-02
120GO:0055085: transmembrane transport3.44E-02
121GO:0006511: ubiquitin-dependent protein catabolic process3.68E-02
122GO:0006413: translational initiation3.86E-02
123GO:0010150: leaf senescence4.06E-02
RankGO TermAdjusted P value
1GO:0016247: channel regulator activity0.00E+00
2GO:0005095: GTPase inhibitor activity0.00E+00
3GO:0010175: sphingosine transmembrane transporter activity0.00E+00
4GO:0016034: maleylacetoacetate isomerase activity0.00E+00
5GO:0051020: GTPase binding2.12E-05
6GO:0004662: CAAX-protein geranylgeranyltransferase activity7.75E-05
7GO:0005090: Sar guanyl-nucleotide exchange factor activity7.75E-05
8GO:0004364: glutathione transferase activity1.33E-04
9GO:0022821: potassium ion antiporter activity1.85E-04
10GO:0034432: bis(5'-adenosyl)-pentaphosphatase activity1.85E-04
11GO:0019172: glyoxalase III activity1.85E-04
12GO:0003854: 3-beta-hydroxy-delta5-steroid dehydrogenase activity3.11E-04
13GO:0031683: G-protein beta/gamma-subunit complex binding3.11E-04
14GO:0003955: NAD(P)H dehydrogenase (quinone) activity3.11E-04
15GO:0001664: G-protein coupled receptor binding3.11E-04
16GO:0017089: glycolipid transporter activity4.49E-04
17GO:0004416: hydroxyacylglutathione hydrolase activity4.49E-04
18GO:0004165: dodecenoyl-CoA delta-isomerase activity4.49E-04
19GO:0004345: glucose-6-phosphate dehydrogenase activity5.98E-04
20GO:0051861: glycolipid binding5.98E-04
21GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor5.98E-04
22GO:0019776: Atg8 ligase activity5.98E-04
23GO:0004523: RNA-DNA hybrid ribonuclease activity7.57E-04
24GO:0017137: Rab GTPase binding7.57E-04
25GO:0005496: steroid binding7.57E-04
26GO:0005471: ATP:ADP antiporter activity7.57E-04
27GO:0004784: superoxide dismutase activity9.24E-04
28GO:0005096: GTPase activator activity1.08E-03
29GO:0102391: decanoate--CoA ligase activity1.10E-03
30GO:0046982: protein heterodimerization activity1.15E-03
31GO:0043295: glutathione binding1.29E-03
32GO:0004467: long-chain fatty acid-CoA ligase activity1.29E-03
33GO:0052747: sinapyl alcohol dehydrogenase activity1.48E-03
34GO:0009672: auxin:proton symporter activity2.14E-03
35GO:0008794: arsenate reductase (glutaredoxin) activity2.61E-03
36GO:0045551: cinnamyl-alcohol dehydrogenase activity2.86E-03
37GO:0003779: actin binding3.03E-03
38GO:0010329: auxin efflux transmembrane transporter activity3.12E-03
39GO:0015266: protein channel activity3.12E-03
40GO:0015095: magnesium ion transmembrane transporter activity3.12E-03
41GO:0008134: transcription factor binding4.23E-03
42GO:0051087: chaperone binding4.52E-03
43GO:0035251: UDP-glucosyltransferase activity4.82E-03
44GO:0010181: FMN binding7.13E-03
45GO:0005507: copper ion binding8.13E-03
46GO:0008270: zinc ion binding1.04E-02
47GO:0008375: acetylglucosaminyltransferase activity1.10E-02
48GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity1.22E-02
49GO:0015238: drug transmembrane transporter activity1.27E-02
50GO:0003924: GTPase activity1.52E-02
51GO:0000149: SNARE binding1.54E-02
52GO:0050661: NADP binding1.59E-02
53GO:0009055: electron carrier activity1.64E-02
54GO:0005484: SNAP receptor activity1.73E-02
55GO:0005515: protein binding1.80E-02
56GO:0004842: ubiquitin-protein transferase activity1.92E-02
57GO:0031625: ubiquitin protein ligase binding2.30E-02
58GO:0045735: nutrient reservoir activity2.41E-02
59GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups2.47E-02
60GO:0080044: quercetin 7-O-glucosyltransferase activity2.58E-02
61GO:0080043: quercetin 3-O-glucosyltransferase activity2.58E-02
62GO:0015035: protein disulfide oxidoreductase activity2.81E-02
63GO:0016758: transferase activity, transferring hexosyl groups3.17E-02
64GO:0016740: transferase activity3.30E-02
65GO:0008565: protein transporter activity3.67E-02
66GO:0015297: antiporter activity3.93E-02
67GO:0008017: microtubule binding4.19E-02
68GO:0008194: UDP-glycosyltransferase activity4.40E-02
69GO:0005525: GTP binding4.44E-02
70GO:0003743: translation initiation factor activity4.53E-02
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Gene type



Gene DE type