Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G52430

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0043048: dolichyl monophosphate biosynthetic process0.00E+00
2GO:1902289: negative regulation of defense response to oomycetes0.00E+00
3GO:0098755: maintenance of seed dormancy by absisic acid0.00E+00
4GO:2000378: negative regulation of reactive oxygen species metabolic process0.00E+00
5GO:0002376: immune system process0.00E+00
6GO:1902009: positive regulation of toxin transport0.00E+00
7GO:0010324: membrane invagination0.00E+00
8GO:0010200: response to chitin2.59E-12
9GO:0006468: protein phosphorylation7.62E-07
10GO:0060548: negative regulation of cell death9.31E-07
11GO:0009751: response to salicylic acid5.81E-06
12GO:0019725: cellular homeostasis7.22E-06
13GO:0009626: plant-type hypersensitive response1.84E-05
14GO:0031348: negative regulation of defense response1.85E-05
15GO:0042742: defense response to bacterium2.73E-05
16GO:0000187: activation of MAPK activity5.48E-05
17GO:0009266: response to temperature stimulus1.26E-04
18GO:0009737: response to abscisic acid1.35E-04
19GO:0045927: positive regulation of growth1.50E-04
20GO:0034052: positive regulation of plant-type hypersensitive response1.50E-04
21GO:0009759: indole glucosinolate biosynthetic process2.14E-04
22GO:2000037: regulation of stomatal complex patterning2.88E-04
23GO:1900056: negative regulation of leaf senescence3.73E-04
24GO:0010365: positive regulation of ethylene biosynthetic process4.02E-04
25GO:0051938: L-glutamate import4.02E-04
26GO:0019567: arabinose biosynthetic process4.02E-04
27GO:0015969: guanosine tetraphosphate metabolic process4.02E-04
28GO:0009609: response to symbiotic bacterium4.02E-04
29GO:0010421: hydrogen peroxide-mediated programmed cell death4.02E-04
30GO:0006562: proline catabolic process4.02E-04
31GO:0010482: regulation of epidermal cell division4.02E-04
32GO:0009270: response to humidity4.02E-04
33GO:0006643: membrane lipid metabolic process4.02E-04
34GO:0032469: endoplasmic reticulum calcium ion homeostasis4.02E-04
35GO:0050691: regulation of defense response to virus by host4.02E-04
36GO:0006979: response to oxidative stress4.54E-04
37GO:0009617: response to bacterium8.22E-04
38GO:0010133: proline catabolic process to glutamate8.71E-04
39GO:0009838: abscission8.71E-04
40GO:0015802: basic amino acid transport8.71E-04
41GO:0080185: effector dependent induction by symbiont of host immune response8.71E-04
42GO:0000719: photoreactive repair8.71E-04
43GO:0044419: interspecies interaction between organisms8.71E-04
44GO:0031349: positive regulation of defense response8.71E-04
45GO:0034243: regulation of transcription elongation from RNA polymerase II promoter8.71E-04
46GO:0002221: pattern recognition receptor signaling pathway8.71E-04
47GO:0043091: L-arginine import8.71E-04
48GO:0035556: intracellular signal transduction1.01E-03
49GO:0009816: defense response to bacterium, incompatible interaction1.15E-03
50GO:0008361: regulation of cell size1.23E-03
51GO:0012501: programmed cell death1.23E-03
52GO:0010229: inflorescence development1.40E-03
53GO:0010186: positive regulation of cellular defense response1.41E-03
54GO:0032786: positive regulation of DNA-templated transcription, elongation1.41E-03
55GO:0042218: 1-aminocyclopropane-1-carboxylate biosynthetic process1.41E-03
56GO:0009653: anatomical structure morphogenesis1.41E-03
57GO:0006048: UDP-N-acetylglucosamine biosynthetic process1.41E-03
58GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway1.41E-03
59GO:0034051: negative regulation of plant-type hypersensitive response1.41E-03
60GO:1900140: regulation of seedling development1.41E-03
61GO:0045793: positive regulation of cell size1.41E-03
62GO:0002237: response to molecule of bacterial origin1.57E-03
63GO:0007034: vacuolar transport1.57E-03
64GO:0048194: Golgi vesicle budding2.04E-03
65GO:0034219: carbohydrate transmembrane transport2.04E-03
66GO:0070301: cellular response to hydrogen peroxide2.04E-03
67GO:0051639: actin filament network formation2.04E-03
68GO:0043207: response to external biotic stimulus2.04E-03
69GO:0072334: UDP-galactose transmembrane transport2.04E-03
70GO:0015749: monosaccharide transport2.04E-03
71GO:0006537: glutamate biosynthetic process2.04E-03
72GO:0072583: clathrin-dependent endocytosis2.04E-03
73GO:0015696: ammonium transport2.04E-03
74GO:0002679: respiratory burst involved in defense response2.04E-03
75GO:0051289: protein homotetramerization2.04E-03
76GO:0046777: protein autophosphorylation2.13E-03
77GO:0045227: capsule polysaccharide biosynthetic process2.74E-03
78GO:0046345: abscisic acid catabolic process2.74E-03
79GO:0010483: pollen tube reception2.74E-03
80GO:0051764: actin crosslink formation2.74E-03
81GO:0009652: thigmotropism2.74E-03
82GO:0045088: regulation of innate immune response2.74E-03
83GO:1902584: positive regulation of response to water deprivation2.74E-03
84GO:0072488: ammonium transmembrane transport2.74E-03
85GO:0033358: UDP-L-arabinose biosynthetic process2.74E-03
86GO:1901002: positive regulation of response to salt stress2.74E-03
87GO:2000038: regulation of stomatal complex development2.74E-03
88GO:0051567: histone H3-K9 methylation2.74E-03
89GO:0080142: regulation of salicylic acid biosynthetic process2.74E-03
90GO:0071456: cellular response to hypoxia2.90E-03
91GO:0009814: defense response, incompatible interaction2.90E-03
92GO:0010227: floral organ abscission3.16E-03
93GO:0007166: cell surface receptor signaling pathway3.47E-03
94GO:0010225: response to UV-C3.51E-03
95GO:0009697: salicylic acid biosynthetic process3.51E-03
96GO:0031347: regulation of defense response3.58E-03
97GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process3.58E-03
98GO:0046323: glucose import4.34E-03
99GO:1900425: negative regulation of defense response to bacterium4.35E-03
100GO:0006574: valine catabolic process4.35E-03
101GO:0010555: response to mannitol5.24E-03
102GO:2000067: regulation of root morphogenesis5.24E-03
103GO:0042372: phylloquinone biosynthetic process5.24E-03
104GO:0045926: negative regulation of growth5.24E-03
105GO:0034389: lipid particle organization5.24E-03
106GO:0009612: response to mechanical stimulus5.24E-03
107GO:0009094: L-phenylalanine biosynthetic process5.24E-03
108GO:0031930: mitochondria-nucleus signaling pathway5.24E-03
109GO:0010044: response to aluminum ion6.19E-03
110GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway6.19E-03
111GO:0010161: red light signaling pathway6.19E-03
112GO:0009610: response to symbiotic fungus6.19E-03
113GO:0046470: phosphatidylcholine metabolic process6.19E-03
114GO:0043090: amino acid import6.19E-03
115GO:0071446: cellular response to salicylic acid stimulus6.19E-03
116GO:0080186: developmental vegetative growth6.19E-03
117GO:0018105: peptidyl-serine phosphorylation6.68E-03
118GO:0006904: vesicle docking involved in exocytosis6.91E-03
119GO:0006952: defense response7.06E-03
120GO:0035265: organ growth7.20E-03
121GO:0009787: regulation of abscisic acid-activated signaling pathway7.20E-03
122GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline7.20E-03
123GO:0030162: regulation of proteolysis7.20E-03
124GO:0006605: protein targeting7.20E-03
125GO:0051607: defense response to virus7.34E-03
126GO:0001666: response to hypoxia7.77E-03
127GO:2000031: regulation of salicylic acid mediated signaling pathway8.26E-03
128GO:0010099: regulation of photomorphogenesis8.26E-03
129GO:0007186: G-protein coupled receptor signaling pathway8.26E-03
130GO:0010120: camalexin biosynthetic process8.26E-03
131GO:0030968: endoplasmic reticulum unfolded protein response8.26E-03
132GO:0016192: vesicle-mediated transport8.27E-03
133GO:0009835: fruit ripening9.38E-03
134GO:0046685: response to arsenic-containing substance9.38E-03
135GO:0006098: pentose-phosphate shunt9.38E-03
136GO:0051865: protein autoubiquitination9.38E-03
137GO:0010112: regulation of systemic acquired resistance9.38E-03
138GO:0009056: catabolic process9.38E-03
139GO:0045892: negative regulation of transcription, DNA-templated1.03E-02
140GO:0009611: response to wounding1.06E-02
141GO:0006886: intracellular protein transport1.06E-02
142GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway1.06E-02
143GO:0009414: response to water deprivation1.17E-02
144GO:0006325: chromatin organization1.18E-02
145GO:0010150: leaf senescence1.29E-02
146GO:0019684: photosynthesis, light reaction1.30E-02
147GO:0009682: induced systemic resistance1.30E-02
148GO:0052544: defense response by callose deposition in cell wall1.30E-02
149GO:0009750: response to fructose1.30E-02
150GO:0048765: root hair cell differentiation1.30E-02
151GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process1.49E-02
152GO:0009753: response to jasmonic acid1.54E-02
153GO:0055046: microgametogenesis1.57E-02
154GO:2000012: regulation of auxin polar transport1.57E-02
155GO:0030036: actin cytoskeleton organization1.57E-02
156GO:0009744: response to sucrose1.67E-02
157GO:0000209: protein polyubiquitination1.74E-02
158GO:0010053: root epidermal cell differentiation1.86E-02
159GO:0009225: nucleotide-sugar metabolic process1.86E-02
160GO:0070588: calcium ion transmembrane transport1.86E-02
161GO:0046854: phosphatidylinositol phosphorylation1.86E-02
162GO:0015031: protein transport1.94E-02
163GO:0000165: MAPK cascade2.02E-02
164GO:0042538: hyperosmotic salinity response2.10E-02
165GO:0005992: trehalose biosynthetic process2.16E-02
166GO:0009116: nucleoside metabolic process2.16E-02
167GO:0030150: protein import into mitochondrial matrix2.16E-02
168GO:0080147: root hair cell development2.16E-02
169GO:0051017: actin filament bundle assembly2.16E-02
170GO:0051302: regulation of cell division2.32E-02
171GO:0010026: trichome differentiation2.32E-02
172GO:0009651: response to salt stress2.34E-02
173GO:0010431: seed maturation2.48E-02
174GO:0019915: lipid storage2.48E-02
175GO:0003333: amino acid transmembrane transport2.48E-02
176GO:0016226: iron-sulfur cluster assembly2.64E-02
177GO:0035428: hexose transmembrane transport2.64E-02
178GO:2000022: regulation of jasmonic acid mediated signaling pathway2.64E-02
179GO:0006012: galactose metabolic process2.81E-02
180GO:0009693: ethylene biosynthetic process2.81E-02
181GO:0009411: response to UV2.81E-02
182GO:0009625: response to insect2.81E-02
183GO:0009620: response to fungus2.93E-02
184GO:0009306: protein secretion2.99E-02
185GO:0009789: positive regulation of abscisic acid-activated signaling pathway3.16E-02
186GO:0009624: response to nematode3.21E-02
187GO:0000271: polysaccharide biosynthetic process3.34E-02
188GO:0009742: brassinosteroid mediated signaling pathway3.40E-02
189GO:0009741: response to brassinosteroid3.53E-02
190GO:0045489: pectin biosynthetic process3.53E-02
191GO:0009646: response to absence of light3.71E-02
192GO:0009749: response to glucose3.90E-02
193GO:0008654: phospholipid biosynthetic process3.90E-02
194GO:0071554: cell wall organization or biogenesis4.09E-02
195GO:0010193: response to ozone4.09E-02
196GO:0007264: small GTPase mediated signal transduction4.29E-02
197GO:0016032: viral process4.29E-02
198GO:0007275: multicellular organism development4.34E-02
199GO:0019760: glucosinolate metabolic process4.69E-02
200GO:0006464: cellular protein modification process4.69E-02
201GO:0007165: signal transduction4.80E-02
RankGO TermAdjusted P value
1GO:0004168: dolichol kinase activity0.00E+00
2GO:0004610: phosphoacetylglucosamine mutase activity0.00E+00
3GO:0005358: high-affinity hydrogen:glucose symporter activity0.00E+00
4GO:0016301: kinase activity4.66E-07
5GO:0005509: calcium ion binding3.32E-06
6GO:0008320: protein transmembrane transporter activity1.09E-05
7GO:0004672: protein kinase activity2.94E-05
8GO:0004674: protein serine/threonine kinase activity1.28E-04
9GO:0009679: hexose:proton symporter activity4.02E-04
10GO:0032050: clathrin heavy chain binding4.02E-04
11GO:2001227: quercitrin binding4.02E-04
12GO:1901149: salicylic acid binding4.02E-04
13GO:0015085: calcium ion transmembrane transporter activity4.02E-04
14GO:0004657: proline dehydrogenase activity4.02E-04
15GO:0015398: high-affinity secondary active ammonium transmembrane transporter activity4.02E-04
16GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity4.02E-04
17GO:2001147: camalexin binding4.02E-04
18GO:0004708: MAP kinase kinase activity4.66E-04
19GO:0005524: ATP binding5.01E-04
20GO:0005515: protein binding5.34E-04
21GO:0015036: disulfide oxidoreductase activity8.71E-04
22GO:0008728: GTP diphosphokinase activity8.71E-04
23GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity9.28E-04
24GO:0043565: sequence-specific DNA binding1.01E-03
25GO:0009931: calcium-dependent protein serine/threonine kinase activity1.23E-03
26GO:0004683: calmodulin-dependent protein kinase activity1.32E-03
27GO:0001664: G-protein coupled receptor binding1.41E-03
28GO:0008442: 3-hydroxyisobutyrate dehydrogenase activity1.41E-03
29GO:0031683: G-protein beta/gamma-subunit complex binding1.41E-03
30GO:0015189: L-lysine transmembrane transporter activity2.04E-03
31GO:0015181: arginine transmembrane transporter activity2.04E-03
32GO:0016656: monodehydroascorbate reductase (NADH) activity2.04E-03
33GO:0043424: protein histidine kinase binding2.41E-03
34GO:0004675: transmembrane receptor protein serine/threonine kinase activity2.54E-03
35GO:0033612: receptor serine/threonine kinase binding2.65E-03
36GO:0047769: arogenate dehydratase activity2.74E-03
37GO:0004664: prephenate dehydratase activity2.74E-03
38GO:0005313: L-glutamate transmembrane transporter activity2.74E-03
39GO:0000993: RNA polymerase II core binding2.74E-03
40GO:0050373: UDP-arabinose 4-epimerase activity2.74E-03
41GO:0004871: signal transducer activity2.82E-03
42GO:0010294: abscisic acid glucosyltransferase activity3.51E-03
43GO:0005459: UDP-galactose transmembrane transporter activity3.51E-03
44GO:0015145: monosaccharide transmembrane transporter activity3.51E-03
45GO:0005546: phosphatidylinositol-4,5-bisphosphate binding3.51E-03
46GO:0070696: transmembrane receptor protein serine/threonine kinase binding3.51E-03
47GO:0004605: phosphatidate cytidylyltransferase activity4.35E-03
48GO:0008519: ammonium transmembrane transporter activity4.35E-03
49GO:0004012: phospholipid-translocating ATPase activity5.24E-03
50GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity5.24E-03
51GO:0003978: UDP-glucose 4-epimerase activity5.24E-03
52GO:0004656: procollagen-proline 4-dioxygenase activity5.24E-03
53GO:0043295: glutathione binding6.19E-03
54GO:0004714: transmembrane receptor protein tyrosine kinase activity7.20E-03
55GO:0016847: 1-aminocyclopropane-1-carboxylate synthase activity7.20E-03
56GO:0005544: calcium-dependent phospholipid binding7.20E-03
57GO:0004869: cysteine-type endopeptidase inhibitor activity7.20E-03
58GO:0004630: phospholipase D activity8.26E-03
59GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity8.26E-03
60GO:0004430: 1-phosphatidylinositol 4-kinase activity8.26E-03
61GO:0015174: basic amino acid transmembrane transporter activity1.06E-02
62GO:0047617: acyl-CoA hydrolase activity1.06E-02
63GO:0030234: enzyme regulator activity1.18E-02
64GO:0004713: protein tyrosine kinase activity1.18E-02
65GO:0004805: trehalose-phosphatase activity1.18E-02
66GO:0003746: translation elongation factor activity1.29E-02
67GO:0005543: phospholipid binding1.30E-02
68GO:0004712: protein serine/threonine/tyrosine kinase activity1.41E-02
69GO:0005262: calcium channel activity1.57E-02
70GO:0005388: calcium-transporting ATPase activity1.57E-02
71GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism1.57E-02
72GO:0051119: sugar transmembrane transporter activity1.86E-02
73GO:0004190: aspartic-type endopeptidase activity1.86E-02
74GO:0005516: calmodulin binding2.07E-02
75GO:0031418: L-ascorbic acid binding2.16E-02
76GO:0004842: ubiquitin-protein transferase activity2.27E-02
77GO:0005525: GTP binding2.40E-02
78GO:0004707: MAP kinase activity2.48E-02
79GO:0015171: amino acid transmembrane transporter activity2.50E-02
80GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity2.64E-02
81GO:0003727: single-stranded RNA binding2.99E-02
82GO:0005355: glucose transmembrane transporter activity3.71E-02
83GO:0019901: protein kinase binding3.90E-02
84GO:0004197: cysteine-type endopeptidase activity4.29E-02
85GO:0051015: actin filament binding4.49E-02
86GO:0003924: GTPase activity4.76E-02
87GO:0015144: carbohydrate transmembrane transporter activity4.78E-02
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Gene type



Gene DE type