GO Enrichment Analysis of Co-expressed Genes with
AT3G52050
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000372: Group I intron splicing | 0.00E+00 |
| 2 | GO:0043972: histone H3-K23 acetylation | 0.00E+00 |
| 3 | GO:0008064: regulation of actin polymerization or depolymerization | 0.00E+00 |
| 4 | GO:0051493: regulation of cytoskeleton organization | 0.00E+00 |
| 5 | GO:0044154: histone H3-K14 acetylation | 0.00E+00 |
| 6 | GO:0036228: protein targeting to nuclear inner membrane | 1.39E-05 |
| 7 | GO:0033206: meiotic cytokinesis | 1.39E-05 |
| 8 | GO:0006999: nuclear pore organization | 1.39E-05 |
| 9 | GO:0043971: histone H3-K18 acetylation | 1.39E-05 |
| 10 | GO:0010305: leaf vascular tissue pattern formation | 4.41E-05 |
| 11 | GO:0010589: leaf proximal/distal pattern formation | 6.55E-05 |
| 12 | GO:0006168: adenine salvage | 9.94E-05 |
| 13 | GO:0006166: purine ribonucleoside salvage | 9.94E-05 |
| 14 | GO:1900864: mitochondrial RNA modification | 1.37E-04 |
| 15 | GO:0071249: cellular response to nitrate | 1.37E-04 |
| 16 | GO:0035279: mRNA cleavage involved in gene silencing by miRNA | 1.37E-04 |
| 17 | GO:0044209: AMP salvage | 1.78E-04 |
| 18 | GO:0009616: virus induced gene silencing | 1.78E-04 |
| 19 | GO:0042176: regulation of protein catabolic process | 2.22E-04 |
| 20 | GO:0035435: phosphate ion transmembrane transport | 2.22E-04 |
| 21 | GO:2000033: regulation of seed dormancy process | 2.68E-04 |
| 22 | GO:0035196: production of miRNAs involved in gene silencing by miRNA | 3.15E-04 |
| 23 | GO:0009740: gibberellic acid mediated signaling pathway | 3.59E-04 |
| 24 | GO:0009938: negative regulation of gibberellic acid mediated signaling pathway | 3.65E-04 |
| 25 | GO:0010928: regulation of auxin mediated signaling pathway | 3.65E-04 |
| 26 | GO:0044030: regulation of DNA methylation | 4.16E-04 |
| 27 | GO:0010093: specification of floral organ identity | 4.16E-04 |
| 28 | GO:0001510: RNA methylation | 4.16E-04 |
| 29 | GO:0000373: Group II intron splicing | 4.68E-04 |
| 30 | GO:0006607: NLS-bearing protein import into nucleus | 4.68E-04 |
| 31 | GO:0048507: meristem development | 4.68E-04 |
| 32 | GO:0030422: production of siRNA involved in RNA interference | 5.78E-04 |
| 33 | GO:0010152: pollen maturation | 6.93E-04 |
| 34 | GO:0080188: RNA-directed DNA methylation | 8.75E-04 |
| 35 | GO:2000377: regulation of reactive oxygen species metabolic process | 1.00E-03 |
| 36 | GO:0009863: salicylic acid mediated signaling pathway | 1.00E-03 |
| 37 | GO:0010187: negative regulation of seed germination | 1.00E-03 |
| 38 | GO:0009686: gibberellin biosynthetic process | 1.27E-03 |
| 39 | GO:0048443: stamen development | 1.34E-03 |
| 40 | GO:0051028: mRNA transport | 1.41E-03 |
| 41 | GO:0080022: primary root development | 1.49E-03 |
| 42 | GO:0008360: regulation of cell shape | 1.56E-03 |
| 43 | GO:0009958: positive gravitropism | 1.56E-03 |
| 44 | GO:0046323: glucose import | 1.56E-03 |
| 45 | GO:0007264: small GTPase mediated signal transduction | 1.88E-03 |
| 46 | GO:0009639: response to red or far red light | 2.04E-03 |
| 47 | GO:0010029: regulation of seed germination | 2.39E-03 |
| 48 | GO:0010218: response to far red light | 2.94E-03 |
| 49 | GO:0048527: lateral root development | 3.03E-03 |
| 50 | GO:0009910: negative regulation of flower development | 3.03E-03 |
| 51 | GO:0009867: jasmonic acid mediated signaling pathway | 3.22E-03 |
| 52 | GO:0010114: response to red light | 3.83E-03 |
| 53 | GO:0009640: photomorphogenesis | 3.83E-03 |
| 54 | GO:0042538: hyperosmotic salinity response | 4.47E-03 |
| 55 | GO:0009909: regulation of flower development | 5.03E-03 |
| 56 | GO:0006396: RNA processing | 6.10E-03 |
| 57 | GO:0009790: embryo development | 7.78E-03 |
| 58 | GO:0009739: response to gibberellin | 9.45E-03 |
| 59 | GO:0009658: chloroplast organization | 1.19E-02 |
| 60 | GO:0007275: multicellular organism development | 1.21E-02 |
| 61 | GO:0006970: response to osmotic stress | 1.25E-02 |
| 62 | GO:0009723: response to ethylene | 1.32E-02 |
| 63 | GO:0016192: vesicle-mediated transport | 1.43E-02 |
| 64 | GO:0006397: mRNA processing | 1.88E-02 |
| 65 | GO:0048364: root development | 1.88E-02 |
| 66 | GO:0006508: proteolysis | 1.90E-02 |
| 67 | GO:0009651: response to salt stress | 2.08E-02 |
| 68 | GO:0009734: auxin-activated signaling pathway | 2.33E-02 |
| 69 | GO:0009908: flower development | 2.55E-02 |
| 70 | GO:0035556: intracellular signal transduction | 2.85E-02 |
| 71 | GO:0009414: response to water deprivation | 4.46E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004808: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity | 0.00E+00 |
| 2 | GO:0016805: dipeptidase activity | 6.55E-05 |
| 3 | GO:0016707: gibberellin 3-beta-dioxygenase activity | 6.55E-05 |
| 4 | GO:0004180: carboxypeptidase activity | 6.55E-05 |
| 5 | GO:0003999: adenine phosphoribosyltransferase activity | 9.94E-05 |
| 6 | GO:0003883: CTP synthase activity | 9.94E-05 |
| 7 | GO:0005354: galactose transmembrane transporter activity | 9.94E-05 |
| 8 | GO:0010011: auxin binding | 1.37E-04 |
| 9 | GO:0010385: double-stranded methylated DNA binding | 1.37E-04 |
| 10 | GO:0017056: structural constituent of nuclear pore | 3.65E-04 |
| 11 | GO:0008173: RNA methyltransferase activity | 4.16E-04 |
| 12 | GO:0000989: transcription factor activity, transcription factor binding | 4.68E-04 |
| 13 | GO:0005487: nucleocytoplasmic transporter activity | 5.23E-04 |
| 14 | GO:0008171: O-methyltransferase activity | 5.78E-04 |
| 15 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 6.34E-04 |
| 16 | GO:0015114: phosphate ion transmembrane transporter activity | 7.52E-04 |
| 17 | GO:0008134: transcription factor binding | 1.00E-03 |
| 18 | GO:0004402: histone acetyltransferase activity | 1.49E-03 |
| 19 | GO:0005355: glucose transmembrane transporter activity | 1.64E-03 |
| 20 | GO:0003723: RNA binding | 2.12E-03 |
| 21 | GO:0008236: serine-type peptidase activity | 2.66E-03 |
| 22 | GO:0003697: single-stranded DNA binding | 3.22E-03 |
| 23 | GO:0042393: histone binding | 3.52E-03 |
| 24 | GO:0003690: double-stranded DNA binding | 4.81E-03 |
| 25 | GO:0015144: carbohydrate transmembrane transporter activity | 7.91E-03 |
| 26 | GO:0005351: sugar:proton symporter activity | 8.60E-03 |
| 27 | GO:0016887: ATPase activity | 2.49E-02 |
| 28 | GO:0044212: transcription regulatory region DNA binding | 4.54E-02 |