GO Enrichment Analysis of Co-expressed Genes with
AT3G51820
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1901401: regulation of tetrapyrrole metabolic process | 0.00E+00 |
| 2 | GO:0006223: uracil salvage | 0.00E+00 |
| 3 | GO:0005996: monosaccharide metabolic process | 0.00E+00 |
| 4 | GO:0016118: carotenoid catabolic process | 0.00E+00 |
| 5 | GO:0019265: glycine biosynthetic process, by transamination of glyoxylate | 0.00E+00 |
| 6 | GO:0015979: photosynthesis | 7.34E-21 |
| 7 | GO:0015995: chlorophyll biosynthetic process | 3.24E-16 |
| 8 | GO:0032544: plastid translation | 7.77E-10 |
| 9 | GO:0009768: photosynthesis, light harvesting in photosystem I | 1.14E-09 |
| 10 | GO:0018298: protein-chromophore linkage | 4.28E-09 |
| 11 | GO:0009735: response to cytokinin | 4.60E-07 |
| 12 | GO:0009773: photosynthetic electron transport in photosystem I | 5.49E-07 |
| 13 | GO:0009645: response to low light intensity stimulus | 4.17E-06 |
| 14 | GO:0006783: heme biosynthetic process | 1.28E-05 |
| 15 | GO:0019252: starch biosynthetic process | 1.87E-05 |
| 16 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 2.80E-05 |
| 17 | GO:0018119: peptidyl-cysteine S-nitrosylation | 2.89E-05 |
| 18 | GO:0006412: translation | 3.90E-05 |
| 19 | GO:0010021: amylopectin biosynthetic process | 5.05E-05 |
| 20 | GO:0045727: positive regulation of translation | 5.05E-05 |
| 21 | GO:0010207: photosystem II assembly | 5.44E-05 |
| 22 | GO:0009658: chloroplast organization | 7.70E-05 |
| 23 | GO:0043097: pyrimidine nucleoside salvage | 8.02E-05 |
| 24 | GO:0010218: response to far red light | 9.01E-05 |
| 25 | GO:0009637: response to blue light | 1.16E-04 |
| 26 | GO:0006206: pyrimidine nucleobase metabolic process | 1.17E-04 |
| 27 | GO:0010189: vitamin E biosynthetic process | 1.60E-04 |
| 28 | GO:0009854: oxidative photosynthetic carbon pathway | 1.60E-04 |
| 29 | GO:0010114: response to red light | 1.82E-04 |
| 30 | GO:0010196: nonphotochemical quenching | 2.10E-04 |
| 31 | GO:0048564: photosystem I assembly | 2.66E-04 |
| 32 | GO:1904964: positive regulation of phytol biosynthetic process | 2.75E-04 |
| 33 | GO:0065002: intracellular protein transmembrane transport | 2.75E-04 |
| 34 | GO:0080093: regulation of photorespiration | 2.75E-04 |
| 35 | GO:0031998: regulation of fatty acid beta-oxidation | 2.75E-04 |
| 36 | GO:0034337: RNA folding | 2.75E-04 |
| 37 | GO:0043953: protein transport by the Tat complex | 2.75E-04 |
| 38 | GO:0051775: response to redox state | 2.75E-04 |
| 39 | GO:1904966: positive regulation of vitamin E biosynthetic process | 2.75E-04 |
| 40 | GO:0071482: cellular response to light stimulus | 3.27E-04 |
| 41 | GO:0042742: defense response to bacterium | 3.43E-04 |
| 42 | GO:0055114: oxidation-reduction process | 3.49E-04 |
| 43 | GO:0006779: porphyrin-containing compound biosynthetic process | 4.67E-04 |
| 44 | GO:0006782: protoporphyrinogen IX biosynthetic process | 5.46E-04 |
| 45 | GO:0016121: carotene catabolic process | 6.04E-04 |
| 46 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 6.04E-04 |
| 47 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 6.04E-04 |
| 48 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 6.04E-04 |
| 49 | GO:0016124: xanthophyll catabolic process | 6.04E-04 |
| 50 | GO:0071457: cellular response to ozone | 6.04E-04 |
| 51 | GO:0006108: malate metabolic process | 8.15E-04 |
| 52 | GO:0006094: gluconeogenesis | 8.15E-04 |
| 53 | GO:0019253: reductive pentose-phosphate cycle | 9.17E-04 |
| 54 | GO:0005977: glycogen metabolic process | 9.79E-04 |
| 55 | GO:0006000: fructose metabolic process | 9.79E-04 |
| 56 | GO:0090391: granum assembly | 9.79E-04 |
| 57 | GO:0006518: peptide metabolic process | 9.79E-04 |
| 58 | GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis | 1.40E-03 |
| 59 | GO:2001141: regulation of RNA biosynthetic process | 1.40E-03 |
| 60 | GO:0071484: cellular response to light intensity | 1.40E-03 |
| 61 | GO:0006107: oxaloacetate metabolic process | 1.40E-03 |
| 62 | GO:0006241: CTP biosynthetic process | 1.40E-03 |
| 63 | GO:0033014: tetrapyrrole biosynthetic process | 1.40E-03 |
| 64 | GO:0006165: nucleoside diphosphate phosphorylation | 1.40E-03 |
| 65 | GO:0006228: UTP biosynthetic process | 1.40E-03 |
| 66 | GO:0010731: protein glutathionylation | 1.40E-03 |
| 67 | GO:1901332: negative regulation of lateral root development | 1.40E-03 |
| 68 | GO:0009644: response to high light intensity | 1.51E-03 |
| 69 | GO:0019748: secondary metabolic process | 1.66E-03 |
| 70 | GO:0015976: carbon utilization | 1.87E-03 |
| 71 | GO:0071486: cellular response to high light intensity | 1.87E-03 |
| 72 | GO:0009765: photosynthesis, light harvesting | 1.87E-03 |
| 73 | GO:0006109: regulation of carbohydrate metabolic process | 1.87E-03 |
| 74 | GO:0006183: GTP biosynthetic process | 1.87E-03 |
| 75 | GO:0006536: glutamate metabolic process | 1.87E-03 |
| 76 | GO:0010600: regulation of auxin biosynthetic process | 1.87E-03 |
| 77 | GO:0006546: glycine catabolic process | 1.87E-03 |
| 78 | GO:0044206: UMP salvage | 1.87E-03 |
| 79 | GO:0006734: NADH metabolic process | 1.87E-03 |
| 80 | GO:0006364: rRNA processing | 2.00E-03 |
| 81 | GO:0042631: cellular response to water deprivation | 2.30E-03 |
| 82 | GO:0009409: response to cold | 2.33E-03 |
| 83 | GO:0010236: plastoquinone biosynthetic process | 2.39E-03 |
| 84 | GO:0006097: glyoxylate cycle | 2.39E-03 |
| 85 | GO:0009107: lipoate biosynthetic process | 2.39E-03 |
| 86 | GO:0042254: ribosome biogenesis | 2.39E-03 |
| 87 | GO:0071493: cellular response to UV-B | 2.39E-03 |
| 88 | GO:0000304: response to singlet oxygen | 2.39E-03 |
| 89 | GO:0006656: phosphatidylcholine biosynthetic process | 2.39E-03 |
| 90 | GO:0006810: transport | 2.79E-03 |
| 91 | GO:0050665: hydrogen peroxide biosynthetic process | 2.95E-03 |
| 92 | GO:0042549: photosystem II stabilization | 2.95E-03 |
| 93 | GO:0010190: cytochrome b6f complex assembly | 2.95E-03 |
| 94 | GO:0010244: response to low fluence blue light stimulus by blue low-fluence system | 3.55E-03 |
| 95 | GO:1901259: chloroplast rRNA processing | 3.55E-03 |
| 96 | GO:0010161: red light signaling pathway | 4.19E-03 |
| 97 | GO:0009772: photosynthetic electron transport in photosystem II | 4.19E-03 |
| 98 | GO:1900057: positive regulation of leaf senescence | 4.19E-03 |
| 99 | GO:0010027: thylakoid membrane organization | 4.42E-03 |
| 100 | GO:0009704: de-etiolation | 4.86E-03 |
| 101 | GO:0010928: regulation of auxin mediated signaling pathway | 4.86E-03 |
| 102 | GO:0005978: glycogen biosynthetic process | 4.86E-03 |
| 103 | GO:0009642: response to light intensity | 4.86E-03 |
| 104 | GO:0006002: fructose 6-phosphate metabolic process | 5.57E-03 |
| 105 | GO:0019430: removal of superoxide radicals | 5.57E-03 |
| 106 | GO:0006754: ATP biosynthetic process | 6.31E-03 |
| 107 | GO:0010206: photosystem II repair | 6.31E-03 |
| 108 | GO:0005982: starch metabolic process | 7.09E-03 |
| 109 | GO:0009853: photorespiration | 7.30E-03 |
| 110 | GO:0006099: tricarboxylic acid cycle | 7.63E-03 |
| 111 | GO:0034599: cellular response to oxidative stress | 7.63E-03 |
| 112 | GO:0000272: polysaccharide catabolic process | 8.74E-03 |
| 113 | GO:0019684: photosynthesis, light reaction | 8.74E-03 |
| 114 | GO:0043085: positive regulation of catalytic activity | 8.74E-03 |
| 115 | GO:0006352: DNA-templated transcription, initiation | 8.74E-03 |
| 116 | GO:0005975: carbohydrate metabolic process | 9.09E-03 |
| 117 | GO:0009767: photosynthetic electron transport chain | 1.05E-02 |
| 118 | GO:0005986: sucrose biosynthetic process | 1.05E-02 |
| 119 | GO:0006807: nitrogen compound metabolic process | 1.05E-02 |
| 120 | GO:0009585: red, far-red light phototransduction | 1.27E-02 |
| 121 | GO:0019762: glucosinolate catabolic process | 1.34E-02 |
| 122 | GO:0009116: nucleoside metabolic process | 1.44E-02 |
| 123 | GO:0000027: ribosomal large subunit assembly | 1.44E-02 |
| 124 | GO:0031408: oxylipin biosynthetic process | 1.65E-02 |
| 125 | GO:0010017: red or far-red light signaling pathway | 1.76E-02 |
| 126 | GO:0016226: iron-sulfur cluster assembly | 1.76E-02 |
| 127 | GO:0035428: hexose transmembrane transport | 1.76E-02 |
| 128 | GO:0009411: response to UV | 1.88E-02 |
| 129 | GO:0009625: response to insect | 1.88E-02 |
| 130 | GO:0032259: methylation | 2.23E-02 |
| 131 | GO:0006606: protein import into nucleus | 2.23E-02 |
| 132 | GO:0006662: glycerol ether metabolic process | 2.35E-02 |
| 133 | GO:0046323: glucose import | 2.35E-02 |
| 134 | GO:0071472: cellular response to salt stress | 2.35E-02 |
| 135 | GO:0015986: ATP synthesis coupled proton transport | 2.47E-02 |
| 136 | GO:0000302: response to reactive oxygen species | 2.73E-02 |
| 137 | GO:0032502: developmental process | 2.86E-02 |
| 138 | GO:0009567: double fertilization forming a zygote and endosperm | 3.13E-02 |
| 139 | GO:0007623: circadian rhythm | 3.14E-02 |
| 140 | GO:0009734: auxin-activated signaling pathway | 3.61E-02 |
| 141 | GO:0042128: nitrate assimilation | 3.84E-02 |
| 142 | GO:0006950: response to stress | 3.99E-02 |
| 143 | GO:0016311: dephosphorylation | 4.14E-02 |
| 144 | GO:0009817: defense response to fungus, incompatible interaction | 4.29E-02 |
| 145 | GO:0010311: lateral root formation | 4.44E-02 |
| 146 | GO:0007568: aging | 4.75E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004314: [acyl-carrier-protein] S-malonyltransferase activity | 0.00E+00 |
| 2 | GO:0008465: glycerate dehydrogenase activity | 0.00E+00 |
| 3 | GO:0048529: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity | 0.00E+00 |
| 4 | GO:0008942: nitrite reductase [NAD(P)H] activity | 0.00E+00 |
| 5 | GO:0050281: serine-glyoxylate transaminase activity | 0.00E+00 |
| 6 | GO:0046863: ribulose-1,5-bisphosphate carboxylase/oxygenase activator activity | 0.00E+00 |
| 7 | GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity | 0.00E+00 |
| 8 | GO:0046554: malate dehydrogenase (NADP+) activity | 0.00E+00 |
| 9 | GO:0090711: FMN hydrolase activity | 0.00E+00 |
| 10 | GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity | 0.00E+00 |
| 11 | GO:0052667: phosphomethylethanolamine N-methyltransferase activity | 0.00E+00 |
| 12 | GO:0045550: geranylgeranyl reductase activity | 0.00E+00 |
| 13 | GO:0016730: oxidoreductase activity, acting on iron-sulfur proteins as donors | 0.00E+00 |
| 14 | GO:0102550: 2-methyl-6-geranylgeranyl-1,4-benzoquinol methyltransferase activity | 0.00E+00 |
| 15 | GO:0004760: serine-pyruvate transaminase activity | 0.00E+00 |
| 16 | GO:0050278: sedoheptulose-bisphosphatase activity | 0.00E+00 |
| 17 | GO:0008974: phosphoribulokinase activity | 0.00E+00 |
| 18 | GO:0019843: rRNA binding | 1.91E-12 |
| 19 | GO:0031409: pigment binding | 5.52E-10 |
| 20 | GO:0016168: chlorophyll binding | 1.91E-09 |
| 21 | GO:0016851: magnesium chelatase activity | 1.16E-07 |
| 22 | GO:0003735: structural constituent of ribosome | 1.40E-06 |
| 23 | GO:0016630: protochlorophyllide reductase activity | 3.47E-06 |
| 24 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 5.05E-05 |
| 25 | GO:0008266: poly(U) RNA binding | 5.44E-05 |
| 26 | GO:0016615: malate dehydrogenase activity | 1.17E-04 |
| 27 | GO:0004849: uridine kinase activity | 1.60E-04 |
| 28 | GO:0030060: L-malate dehydrogenase activity | 1.60E-04 |
| 29 | GO:0008746: NAD(P)+ transhydrogenase activity | 2.75E-04 |
| 30 | GO:0051741: 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity | 2.75E-04 |
| 31 | GO:0016776: phosphotransferase activity, phosphate group as acceptor | 2.75E-04 |
| 32 | GO:0004325: ferrochelatase activity | 2.75E-04 |
| 33 | GO:0004853: uroporphyrinogen decarboxylase activity | 2.75E-04 |
| 34 | GO:0030234: enzyme regulator activity | 5.46E-04 |
| 35 | GO:0000234: phosphoethanolamine N-methyltransferase activity | 6.04E-04 |
| 36 | GO:0008883: glutamyl-tRNA reductase activity | 6.04E-04 |
| 37 | GO:0010297: heteropolysaccharide binding | 6.04E-04 |
| 38 | GO:0009977: proton motive force dependent protein transmembrane transporter activity | 6.04E-04 |
| 39 | GO:0004047: aminomethyltransferase activity | 6.04E-04 |
| 40 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 6.04E-04 |
| 41 | GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity | 6.04E-04 |
| 42 | GO:0003844: 1,4-alpha-glucan branching enzyme activity | 6.04E-04 |
| 43 | GO:0019156: isoamylase activity | 6.04E-04 |
| 44 | GO:0043169: cation binding | 9.79E-04 |
| 45 | GO:0016992: lipoate synthase activity | 9.79E-04 |
| 46 | GO:0005528: FK506 binding | 1.26E-03 |
| 47 | GO:0004550: nucleoside diphosphate kinase activity | 1.40E-03 |
| 48 | GO:0008097: 5S rRNA binding | 1.40E-03 |
| 49 | GO:0004351: glutamate decarboxylase activity | 1.40E-03 |
| 50 | GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity | 1.40E-03 |
| 51 | GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity | 1.40E-03 |
| 52 | GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | 1.40E-03 |
| 53 | GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity | 1.40E-03 |
| 54 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.67E-03 |
| 55 | GO:0008891: glycolate oxidase activity | 1.87E-03 |
| 56 | GO:0001053: plastid sigma factor activity | 1.87E-03 |
| 57 | GO:0004845: uracil phosphoribosyltransferase activity | 1.87E-03 |
| 58 | GO:0008453: alanine-glyoxylate transaminase activity | 1.87E-03 |
| 59 | GO:0016987: sigma factor activity | 1.87E-03 |
| 60 | GO:0009011: starch synthase activity | 1.87E-03 |
| 61 | GO:0043495: protein anchor | 1.87E-03 |
| 62 | GO:0045549: 9-cis-epoxycarotenoid dioxygenase activity | 2.39E-03 |
| 63 | GO:0003959: NADPH dehydrogenase activity | 2.39E-03 |
| 64 | GO:0050662: coenzyme binding | 2.67E-03 |
| 65 | GO:0004332: fructose-bisphosphate aldolase activity | 2.95E-03 |
| 66 | GO:0004130: cytochrome-c peroxidase activity | 2.95E-03 |
| 67 | GO:0004784: superoxide dismutase activity | 2.95E-03 |
| 68 | GO:0004556: alpha-amylase activity | 2.95E-03 |
| 69 | GO:0042578: phosphoric ester hydrolase activity | 2.95E-03 |
| 70 | GO:0005515: protein binding | 2.95E-03 |
| 71 | GO:0048038: quinone binding | 3.06E-03 |
| 72 | GO:0051920: peroxiredoxin activity | 3.55E-03 |
| 73 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 3.55E-03 |
| 74 | GO:0019899: enzyme binding | 4.19E-03 |
| 75 | GO:0016209: antioxidant activity | 4.86E-03 |
| 76 | GO:0004033: aldo-keto reductase (NADP) activity | 4.86E-03 |
| 77 | GO:0071949: FAD binding | 6.31E-03 |
| 78 | GO:0004222: metalloendopeptidase activity | 6.35E-03 |
| 79 | GO:0016491: oxidoreductase activity | 6.89E-03 |
| 80 | GO:0003746: translation elongation factor activity | 7.30E-03 |
| 81 | GO:0008047: enzyme activator activity | 7.90E-03 |
| 82 | GO:0042802: identical protein binding | 8.53E-03 |
| 83 | GO:0004185: serine-type carboxypeptidase activity | 9.42E-03 |
| 84 | GO:0051537: 2 iron, 2 sulfur cluster binding | 1.02E-02 |
| 85 | GO:0004089: carbonate dehydratase activity | 1.05E-02 |
| 86 | GO:0031072: heat shock protein binding | 1.05E-02 |
| 87 | GO:0051536: iron-sulfur cluster binding | 1.44E-02 |
| 88 | GO:0004857: enzyme inhibitor activity | 1.44E-02 |
| 89 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 1.56E-02 |
| 90 | GO:0016787: hydrolase activity | 1.76E-02 |
| 91 | GO:0022891: substrate-specific transmembrane transporter activity | 1.88E-02 |
| 92 | GO:0047134: protein-disulfide reductase activity | 2.11E-02 |
| 93 | GO:0046933: proton-transporting ATP synthase activity, rotational mechanism | 2.35E-02 |
| 94 | GO:0004791: thioredoxin-disulfide reductase activity | 2.47E-02 |
| 95 | GO:0005355: glucose transmembrane transporter activity | 2.47E-02 |
| 96 | GO:0010181: FMN binding | 2.47E-02 |
| 97 | GO:0009055: electron carrier activity | 2.58E-02 |
| 98 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 2.99E-02 |
| 99 | GO:0008483: transaminase activity | 3.27E-02 |
| 100 | GO:0004721: phosphoprotein phosphatase activity | 3.99E-02 |
| 101 | GO:0046872: metal ion binding | 4.02E-02 |
| 102 | GO:0016887: ATPase activity | 4.06E-02 |
| 103 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 4.14E-02 |
| 104 | GO:0003824: catalytic activity | 4.51E-02 |
| 105 | GO:0008168: methyltransferase activity | 4.66E-02 |
| 106 | GO:0004601: peroxidase activity | 4.84E-02 |