Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G51420

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation0.00E+00
2GO:0090470: shoot organ boundary specification0.00E+00
3GO:0006428: isoleucyl-tRNA aminoacylation0.00E+00
4GO:0042821: pyridoxal biosynthetic process0.00E+00
5GO:0042407: cristae formation0.00E+00
6GO:0017038: protein import0.00E+00
7GO:0035970: peptidyl-threonine dephosphorylation0.00E+00
8GO:0046460: neutral lipid biosynthetic process0.00E+00
9GO:0009106: lipoate metabolic process0.00E+00
10GO:0090279: regulation of calcium ion import0.00E+00
11GO:0031116: positive regulation of microtubule polymerization0.00E+00
12GO:0042820: vitamin B6 catabolic process0.00E+00
13GO:0006114: glycerol biosynthetic process0.00E+00
14GO:0018023: peptidyl-lysine trimethylation0.00E+00
15GO:0071474: cellular hyperosmotic response0.00E+00
16GO:1902458: positive regulation of stomatal opening0.00E+00
17GO:0070125: mitochondrial translational elongation0.00E+00
18GO:0006429: leucyl-tRNA aminoacylation0.00E+00
19GO:0009249: protein lipoylation0.00E+00
20GO:0019685: photosynthesis, dark reaction0.00E+00
21GO:0043488: regulation of mRNA stability0.00E+00
22GO:0071482: cellular response to light stimulus4.14E-07
23GO:0045038: protein import into chloroplast thylakoid membrane2.24E-06
24GO:1903426: regulation of reactive oxygen species biosynthetic process7.60E-06
25GO:2001141: regulation of RNA biosynthetic process5.73E-05
26GO:0006415: translational termination7.35E-05
27GO:0006352: DNA-templated transcription, initiation7.35E-05
28GO:0010027: thylakoid membrane organization1.37E-04
29GO:0032543: mitochondrial translation1.56E-04
30GO:0015995: chlorophyll biosynthetic process1.82E-04
31GO:0009395: phospholipid catabolic process3.88E-04
32GO:0000476: maturation of 4.5S rRNA4.13E-04
33GO:0009443: pyridoxal 5'-phosphate salvage4.13E-04
34GO:0000967: rRNA 5'-end processing4.13E-04
35GO:0015671: oxygen transport4.13E-04
36GO:0042547: cell wall modification involved in multidimensional cell growth4.13E-04
37GO:0015801: aromatic amino acid transport4.13E-04
38GO:0006747: FAD biosynthetic process4.13E-04
39GO:0006605: protein targeting4.85E-04
40GO:2000070: regulation of response to water deprivation4.85E-04
41GO:0032544: plastid translation5.92E-04
42GO:0019432: triglyceride biosynthetic process7.09E-04
43GO:1900865: chloroplast RNA modification8.37E-04
44GO:0010198: synergid death8.93E-04
45GO:1900871: chloroplast mRNA modification8.93E-04
46GO:0006423: cysteinyl-tRNA aminoacylation8.93E-04
47GO:0006435: threonyl-tRNA aminoacylation8.93E-04
48GO:0006432: phenylalanyl-tRNA aminoacylation8.93E-04
49GO:0018026: peptidyl-lysine monomethylation8.93E-04
50GO:0000256: allantoin catabolic process8.93E-04
51GO:0051262: protein tetramerization8.93E-04
52GO:0034470: ncRNA processing8.93E-04
53GO:0010275: NAD(P)H dehydrogenase complex assembly8.93E-04
54GO:0006782: protoporphyrinogen IX biosynthetic process9.73E-04
55GO:0009089: lysine biosynthetic process via diaminopimelate1.12E-03
56GO:0016024: CDP-diacylglycerol biosynthetic process1.28E-03
57GO:0009627: systemic acquired resistance1.29E-03
58GO:0033591: response to L-ascorbic acid1.45E-03
59GO:0010136: ureide catabolic process1.45E-03
60GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition1.45E-03
61GO:0015940: pantothenate biosynthetic process1.45E-03
62GO:0001578: microtubule bundle formation1.45E-03
63GO:0045493: xylan catabolic process1.45E-03
64GO:0010207: photosystem II assembly1.64E-03
65GO:0046653: tetrahydrofolate metabolic process2.10E-03
66GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity2.10E-03
67GO:0006145: purine nucleobase catabolic process2.10E-03
68GO:0006424: glutamyl-tRNA aminoacylation2.10E-03
69GO:0010371: regulation of gibberellin biosynthetic process2.10E-03
70GO:0009102: biotin biosynthetic process2.10E-03
71GO:0006418: tRNA aminoacylation for protein translation2.50E-03
72GO:0048511: rhythmic process2.75E-03
73GO:0051322: anaphase2.82E-03
74GO:0009765: photosynthesis, light harvesting2.82E-03
75GO:0022622: root system development2.82E-03
76GO:0007020: microtubule nucleation2.82E-03
77GO:0071483: cellular response to blue light2.82E-03
78GO:0010109: regulation of photosynthesis2.82E-03
79GO:0009306: protein secretion3.58E-03
80GO:0006465: signal peptide processing3.61E-03
81GO:0000304: response to singlet oxygen3.61E-03
82GO:0080110: sporopollenin biosynthetic process3.61E-03
83GO:0046785: microtubule polymerization3.61E-03
84GO:0016120: carotene biosynthetic process3.61E-03
85GO:0046907: intracellular transport3.61E-03
86GO:0009107: lipoate biosynthetic process3.61E-03
87GO:0016123: xanthophyll biosynthetic process3.61E-03
88GO:0016117: carotenoid biosynthetic process3.87E-03
89GO:0016554: cytidine to uridine editing4.47E-03
90GO:0006655: phosphatidylglycerol biosynthetic process4.47E-03
91GO:0010190: cytochrome b6f complex assembly4.47E-03
92GO:0009955: adaxial/abaxial pattern specification5.38E-03
93GO:0034389: lipid particle organization5.38E-03
94GO:1901259: chloroplast rRNA processing5.38E-03
95GO:0030488: tRNA methylation5.38E-03
96GO:0006614: SRP-dependent cotranslational protein targeting to membrane6.36E-03
97GO:0032880: regulation of protein localization6.36E-03
98GO:0048528: post-embryonic root development6.36E-03
99GO:0000105: histidine biosynthetic process7.40E-03
100GO:0009231: riboflavin biosynthetic process7.40E-03
101GO:0052543: callose deposition in cell wall7.40E-03
102GO:0022900: electron transport chain8.49E-03
103GO:0015996: chlorophyll catabolic process8.49E-03
104GO:0007186: G-protein coupled receptor signaling pathway8.49E-03
105GO:0009657: plastid organization8.49E-03
106GO:0017004: cytochrome complex assembly8.49E-03
107GO:0010206: photosystem II repair9.65E-03
108GO:0006783: heme biosynthetic process9.65E-03
109GO:0015979: photosynthesis9.94E-03
110GO:0016311: dephosphorylation1.00E-02
111GO:0043067: regulation of programmed cell death1.09E-02
112GO:0006779: porphyrin-containing compound biosynthetic process1.09E-02
113GO:0005982: starch metabolic process1.09E-02
114GO:0006949: syncytium formation1.21E-02
115GO:0007568: aging1.22E-02
116GO:0006413: translational initiation1.24E-02
117GO:0019684: photosynthesis, light reaction1.34E-02
118GO:0008285: negative regulation of cell proliferation1.34E-02
119GO:0045087: innate immune response1.34E-02
120GO:0018119: peptidyl-cysteine S-nitrosylation1.34E-02
121GO:0009684: indoleacetic acid biosynthetic process1.34E-02
122GO:0006820: anion transport1.48E-02
123GO:0045037: protein import into chloroplast stroma1.48E-02
124GO:0006631: fatty acid metabolic process1.60E-02
125GO:2000012: regulation of auxin polar transport1.62E-02
126GO:0009725: response to hormone1.62E-02
127GO:0010143: cutin biosynthetic process1.76E-02
128GO:0019853: L-ascorbic acid biosynthetic process1.91E-02
129GO:0071732: cellular response to nitric oxide1.91E-02
130GO:0090351: seedling development1.91E-02
131GO:0000162: tryptophan biosynthetic process2.06E-02
132GO:0006071: glycerol metabolic process2.06E-02
133GO:0009664: plant-type cell wall organization2.18E-02
134GO:0009658: chloroplast organization2.37E-02
135GO:0043622: cortical microtubule organization2.38E-02
136GO:0007017: microtubule-based process2.38E-02
137GO:0010073: meristem maintenance2.38E-02
138GO:0061077: chaperone-mediated protein folding2.55E-02
139GO:0031408: oxylipin biosynthetic process2.55E-02
140GO:0003333: amino acid transmembrane transport2.55E-02
141GO:0016998: cell wall macromolecule catabolic process2.55E-02
142GO:0009793: embryo development ending in seed dormancy2.69E-02
143GO:0009814: defense response, incompatible interaction2.72E-02
144GO:0035428: hexose transmembrane transport2.72E-02
145GO:0031348: negative regulation of defense response2.72E-02
146GO:0080092: regulation of pollen tube growth2.72E-02
147GO:0009831: plant-type cell wall modification involved in multidimensional cell growth2.89E-02
148GO:0071369: cellular response to ethylene stimulus2.89E-02
149GO:0010227: floral organ abscission2.89E-02
150GO:0006012: galactose metabolic process2.89E-02
151GO:0009735: response to cytokinin3.01E-02
152GO:0055114: oxidation-reduction process3.04E-02
153GO:0046686: response to cadmium ion3.05E-02
154GO:0010584: pollen exine formation3.07E-02
155GO:0080167: response to karrikin3.10E-02
156GO:0009789: positive regulation of abscisic acid-activated signaling pathway3.25E-02
157GO:0051028: mRNA transport3.25E-02
158GO:0008284: positive regulation of cell proliferation3.25E-02
159GO:0042335: cuticle development3.44E-02
160GO:0009958: positive gravitropism3.63E-02
161GO:0010197: polar nucleus fusion3.63E-02
162GO:0010182: sugar mediated signaling pathway3.63E-02
163GO:0046323: glucose import3.63E-02
164GO:0042752: regulation of circadian rhythm3.82E-02
165GO:0009646: response to absence of light3.82E-02
166GO:0016032: viral process4.41E-02
167GO:0071281: cellular response to iron ion4.62E-02
168GO:0010090: trichome morphogenesis4.62E-02
169GO:0016042: lipid catabolic process4.82E-02
170GO:0009828: plant-type cell wall loosening4.83E-02
RankGO TermAdjusted P value
1GO:0010349: L-galactose dehydrogenase activity0.00E+00
2GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity0.00E+00
3GO:0050236: pyridoxine:NADP 4-dehydrogenase activity0.00E+00
4GO:0019144: ADP-sugar diphosphatase activity0.00E+00
5GO:0061634: alpha-D-xyloside xylohydrolase0.00E+00
6GO:0071522: ureidoglycine aminohydrolase activity0.00E+00
7GO:0043864: indoleacetamide hydrolase activity0.00E+00
8GO:0008115: sarcosine oxidase activity0.00E+00
9GO:0045435: lycopene epsilon cyclase activity0.00E+00
10GO:0050613: delta14-sterol reductase activity0.00E+00
11GO:0004822: isoleucine-tRNA ligase activity0.00E+00
12GO:0080176: xyloglucan 1,6-alpha-xylosidase activity0.00E+00
13GO:0004823: leucine-tRNA ligase activity0.00E+00
14GO:0003858: 3-hydroxybutyrate dehydrogenase activity0.00E+00
15GO:0003949: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity0.00E+00
16GO:0033819: lipoyl(octanoyl) transferase activity0.00E+00
17GO:0005048: signal sequence binding0.00E+00
18GO:0004076: biotin synthase activity0.00E+00
19GO:0043136: glycerol-3-phosphatase activity0.00E+00
20GO:0000121: glycerol-1-phosphatase activity0.00E+00
21GO:0016987: sigma factor activity1.00E-06
22GO:0001053: plastid sigma factor activity1.00E-06
23GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase7.60E-06
24GO:0002161: aminoacyl-tRNA editing activity2.63E-05
25GO:0070402: NADPH binding2.63E-05
26GO:0003747: translation release factor activity3.40E-05
27GO:0016149: translation release factor activity, codon specific5.73E-05
28GO:0016851: magnesium chelatase activity5.73E-05
29GO:0004040: amidase activity1.56E-04
30GO:0004366: glycerol-3-phosphate O-acyltransferase activity2.23E-04
31GO:0003993: acid phosphatase activity3.47E-04
32GO:0005227: calcium activated cation channel activity4.13E-04
33GO:0003864: 3-methyl-2-oxobutanoate hydroxymethyltransferase activity4.13E-04
34GO:0080042: ADP-glucose pyrophosphohydrolase activity4.13E-04
35GO:0004856: xylulokinase activity4.13E-04
36GO:0009496: plastoquinol--plastocyanin reductase activity4.13E-04
37GO:0004853: uroporphyrinogen decarboxylase activity4.13E-04
38GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity4.13E-04
39GO:0016784: 3-mercaptopyruvate sulfurtransferase activity4.13E-04
40GO:0005344: oxygen transporter activity4.13E-04
41GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity4.13E-04
42GO:0004033: aldo-keto reductase (NADP) activity4.85E-04
43GO:0003755: peptidyl-prolyl cis-trans isomerase activity6.14E-04
44GO:0015173: aromatic amino acid transmembrane transporter activity8.93E-04
45GO:0004817: cysteine-tRNA ligase activity8.93E-04
46GO:0003919: FMN adenylyltransferase activity8.93E-04
47GO:0004826: phenylalanine-tRNA ligase activity8.93E-04
48GO:0004829: threonine-tRNA ligase activity8.93E-04
49GO:0017118: lipoyltransferase activity8.93E-04
50GO:0080041: ADP-ribose pyrophosphohydrolase activity8.93E-04
51GO:0009977: proton motive force dependent protein transmembrane transporter activity8.93E-04
52GO:0016415: octanoyltransferase activity8.93E-04
53GO:0000049: tRNA binding1.28E-03
54GO:0016788: hydrolase activity, acting on ester bonds1.43E-03
55GO:0003913: DNA photolyase activity1.45E-03
56GO:0005504: fatty acid binding1.45E-03
57GO:0004148: dihydrolipoyl dehydrogenase activity1.45E-03
58GO:0003955: NAD(P)H dehydrogenase (quinone) activity1.45E-03
59GO:0030267: glyoxylate reductase (NADP) activity1.45E-03
60GO:0015462: ATPase-coupled protein transmembrane transporter activity1.45E-03
61GO:0004180: carboxypeptidase activity1.45E-03
62GO:0004792: thiosulfate sulfurtransferase activity2.10E-03
63GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor2.10E-03
64GO:0001872: (1->3)-beta-D-glucan binding2.10E-03
65GO:0005528: FK506 binding2.27E-03
66GO:0004045: aminoacyl-tRNA hydrolase activity2.82E-03
67GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds2.82E-03
68GO:0045430: chalcone isomerase activity2.82E-03
69GO:0009044: xylan 1,4-beta-xylosidase activity2.82E-03
70GO:0046556: alpha-L-arabinofuranosidase activity2.82E-03
71GO:0016279: protein-lysine N-methyltransferase activity2.82E-03
72GO:0030570: pectate lyase activity3.29E-03
73GO:0016773: phosphotransferase activity, alcohol group as acceptor3.61E-03
74GO:0005275: amine transmembrane transporter activity3.61E-03
75GO:0004812: aminoacyl-tRNA ligase activity3.87E-03
76GO:0003899: DNA-directed 5'-3' RNA polymerase activity4.32E-03
77GO:0042578: phosphoric ester hydrolase activity4.47E-03
78GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity4.47E-03
79GO:2001070: starch binding4.47E-03
80GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity5.38E-03
81GO:0005261: cation channel activity5.38E-03
82GO:0003730: mRNA 3'-UTR binding5.38E-03
83GO:0004144: diacylglycerol O-acyltransferase activity5.38E-03
84GO:0004723: calcium-dependent protein serine/threonine phosphatase activity5.38E-03
85GO:0009881: photoreceptor activity6.36E-03
86GO:0008312: 7S RNA binding7.40E-03
87GO:0005337: nucleoside transmembrane transporter activity7.40E-03
88GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen9.33E-03
89GO:0008236: serine-type peptidase activity1.00E-02
90GO:0004222: metalloendopeptidase activity1.17E-02
91GO:0005089: Rho guanyl-nucleotide exchange factor activity1.34E-02
92GO:0003746: translation elongation factor activity1.34E-02
93GO:0047372: acylglycerol lipase activity1.34E-02
94GO:0031072: heat shock protein binding1.62E-02
95GO:0003743: translation initiation factor activity1.66E-02
96GO:0008083: growth factor activity1.76E-02
97GO:0008266: poly(U) RNA binding1.76E-02
98GO:0042973: glucan endo-1,3-beta-D-glucosidase activity1.76E-02
99GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds1.77E-02
100GO:0051537: 2 iron, 2 sulfur cluster binding1.88E-02
101GO:0003723: RNA binding2.04E-02
102GO:0051536: iron-sulfur cluster binding2.22E-02
103GO:0004857: enzyme inhibitor activity2.22E-02
104GO:0016491: oxidoreductase activity2.23E-02
105GO:0016787: hydrolase activity2.30E-02
106GO:0004176: ATP-dependent peptidase activity2.55E-02
107GO:0005525: GTP binding2.57E-02
108GO:0022891: substrate-specific transmembrane transporter activity2.89E-02
109GO:0003756: protein disulfide isomerase activity3.07E-02
110GO:0052689: carboxylic ester hydrolase activity3.51E-02
111GO:0008080: N-acetyltransferase activity3.63E-02
112GO:0005355: glucose transmembrane transporter activity3.82E-02
113GO:0050662: coenzyme binding3.82E-02
114GO:0004872: receptor activity4.01E-02
115GO:0019843: rRNA binding4.17E-02
116GO:0048038: quinone binding4.21E-02
117GO:0016829: lyase activity4.51E-02
118GO:0016791: phosphatase activity4.83E-02
119GO:0003924: GTPase activity4.99E-02
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Gene type



Gene DE type