GO Enrichment Analysis of Co-expressed Genes with
AT3G51140
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0033614: chloroplast proton-transporting ATP synthase complex assembly | 0.00E+00 |
| 2 | GO:0044249: cellular biosynthetic process | 0.00E+00 |
| 3 | GO:0018160: peptidyl-pyrromethane cofactor linkage | 0.00E+00 |
| 4 | GO:0046040: IMP metabolic process | 0.00E+00 |
| 5 | GO:0006429: leucyl-tRNA aminoacylation | 0.00E+00 |
| 6 | GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate | 0.00E+00 |
| 7 | GO:0090071: negative regulation of ribosome biogenesis | 0.00E+00 |
| 8 | GO:0006167: AMP biosynthetic process | 0.00E+00 |
| 9 | GO:0042026: protein refolding | 3.59E-07 |
| 10 | GO:0009793: embryo development ending in seed dormancy | 5.07E-07 |
| 11 | GO:1900871: chloroplast mRNA modification | 7.96E-07 |
| 12 | GO:0042793: transcription from plastid promoter | 3.28E-05 |
| 13 | GO:0006458: 'de novo' protein folding | 4.63E-05 |
| 14 | GO:0009657: plastid organization | 1.02E-04 |
| 15 | GO:0000476: maturation of 4.5S rRNA | 1.25E-04 |
| 16 | GO:0000967: rRNA 5'-end processing | 1.25E-04 |
| 17 | GO:0043489: RNA stabilization | 1.25E-04 |
| 18 | GO:0042547: cell wall modification involved in multidimensional cell growth | 1.25E-04 |
| 19 | GO:0042371: vitamin K biosynthetic process | 1.25E-04 |
| 20 | GO:0006419: alanyl-tRNA aminoacylation | 1.25E-04 |
| 21 | GO:0046901: tetrahydrofolylpolyglutamate biosynthetic process | 1.25E-04 |
| 22 | GO:0009790: embryo development | 1.61E-04 |
| 23 | GO:0006094: gluconeogenesis | 2.77E-04 |
| 24 | GO:0009220: pyrimidine ribonucleotide biosynthetic process | 2.90E-04 |
| 25 | GO:0001682: tRNA 5'-leader removal | 2.90E-04 |
| 26 | GO:0034470: ncRNA processing | 2.90E-04 |
| 27 | GO:0010198: synergid death | 2.90E-04 |
| 28 | GO:0044208: 'de novo' AMP biosynthetic process | 2.90E-04 |
| 29 | GO:0071732: cellular response to nitric oxide | 3.52E-04 |
| 30 | GO:0009658: chloroplast organization | 4.32E-04 |
| 31 | GO:0015940: pantothenate biosynthetic process | 4.78E-04 |
| 32 | GO:0005977: glycogen metabolic process | 4.78E-04 |
| 33 | GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition | 4.78E-04 |
| 34 | GO:0061077: chaperone-mediated protein folding | 5.28E-04 |
| 35 | GO:0007005: mitochondrion organization | 5.76E-04 |
| 36 | GO:0006730: one-carbon metabolic process | 5.76E-04 |
| 37 | GO:0071369: cellular response to ethylene stimulus | 6.28E-04 |
| 38 | GO:0016556: mRNA modification | 6.85E-04 |
| 39 | GO:0043572: plastid fission | 6.85E-04 |
| 40 | GO:0051085: chaperone mediated protein folding requiring cofactor | 6.85E-04 |
| 41 | GO:0009152: purine ribonucleotide biosynthetic process | 6.85E-04 |
| 42 | GO:0010239: chloroplast mRNA processing | 6.85E-04 |
| 43 | GO:0044205: 'de novo' UMP biosynthetic process | 9.08E-04 |
| 44 | GO:0010021: amylopectin biosynthetic process | 9.08E-04 |
| 45 | GO:0051781: positive regulation of cell division | 9.08E-04 |
| 46 | GO:0019252: starch biosynthetic process | 9.76E-04 |
| 47 | GO:0032543: mitochondrial translation | 1.15E-03 |
| 48 | GO:0010236: plastoquinone biosynthetic process | 1.15E-03 |
| 49 | GO:0045038: protein import into chloroplast thylakoid membrane | 1.15E-03 |
| 50 | GO:0071281: cellular response to iron ion | 1.18E-03 |
| 51 | GO:0050665: hydrogen peroxide biosynthetic process | 1.41E-03 |
| 52 | GO:0009451: RNA modification | 1.59E-03 |
| 53 | GO:0009627: systemic acquired resistance | 1.65E-03 |
| 54 | GO:0042372: phylloquinone biosynthetic process | 1.68E-03 |
| 55 | GO:0017148: negative regulation of translation | 1.68E-03 |
| 56 | GO:0009854: oxidative photosynthetic carbon pathway | 1.68E-03 |
| 57 | GO:0019509: L-methionine salvage from methylthioadenosine | 1.68E-03 |
| 58 | GO:1901259: chloroplast rRNA processing | 1.68E-03 |
| 59 | GO:0006400: tRNA modification | 1.98E-03 |
| 60 | GO:0009772: photosynthetic electron transport in photosystem II | 1.98E-03 |
| 61 | GO:0006614: SRP-dependent cotranslational protein targeting to membrane | 1.98E-03 |
| 62 | GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process | 1.98E-03 |
| 63 | GO:0000105: histidine biosynthetic process | 2.29E-03 |
| 64 | GO:0006353: DNA-templated transcription, termination | 2.29E-03 |
| 65 | GO:0010204: defense response signaling pathway, resistance gene-independent | 2.61E-03 |
| 66 | GO:0006783: heme biosynthetic process | 2.95E-03 |
| 67 | GO:0006098: pentose-phosphate shunt | 2.95E-03 |
| 68 | GO:0005982: starch metabolic process | 3.31E-03 |
| 69 | GO:0006779: porphyrin-containing compound biosynthetic process | 3.31E-03 |
| 70 | GO:1900865: chloroplast RNA modification | 3.31E-03 |
| 71 | GO:0006782: protoporphyrinogen IX biosynthetic process | 3.68E-03 |
| 72 | GO:0019538: protein metabolic process | 3.68E-03 |
| 73 | GO:0009073: aromatic amino acid family biosynthetic process | 4.06E-03 |
| 74 | GO:0018119: peptidyl-cysteine S-nitrosylation | 4.06E-03 |
| 75 | GO:0006415: translational termination | 4.06E-03 |
| 76 | GO:0005983: starch catabolic process | 4.45E-03 |
| 77 | GO:0006096: glycolytic process | 4.95E-03 |
| 78 | GO:0010020: chloroplast fission | 5.28E-03 |
| 79 | GO:0090351: seedling development | 5.71E-03 |
| 80 | GO:0006396: RNA processing | 6.13E-03 |
| 81 | GO:0009116: nucleoside metabolic process | 6.61E-03 |
| 82 | GO:0006418: tRNA aminoacylation for protein translation | 7.08E-03 |
| 83 | GO:0009814: defense response, incompatible interaction | 8.05E-03 |
| 84 | GO:0031348: negative regulation of defense response | 8.05E-03 |
| 85 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 9.60E-03 |
| 86 | GO:0008033: tRNA processing | 1.01E-02 |
| 87 | GO:0048868: pollen tube development | 1.07E-02 |
| 88 | GO:0009409: response to cold | 1.19E-02 |
| 89 | GO:0008380: RNA splicing | 1.23E-02 |
| 90 | GO:0071554: cell wall organization or biogenesis | 1.24E-02 |
| 91 | GO:0006508: proteolysis | 1.30E-02 |
| 92 | GO:0005975: carbohydrate metabolic process | 1.41E-02 |
| 93 | GO:0001666: response to hypoxia | 1.61E-02 |
| 94 | GO:0010027: thylakoid membrane organization | 1.61E-02 |
| 95 | GO:0009911: positive regulation of flower development | 1.61E-02 |
| 96 | GO:0006457: protein folding | 1.65E-02 |
| 97 | GO:0015995: chlorophyll biosynthetic process | 1.81E-02 |
| 98 | GO:0008219: cell death | 1.94E-02 |
| 99 | GO:0009631: cold acclimation | 2.15E-02 |
| 100 | GO:0045087: innate immune response | 2.30E-02 |
| 101 | GO:0009853: photorespiration | 2.30E-02 |
| 102 | GO:0032259: methylation | 2.81E-02 |
| 103 | GO:0006397: mRNA processing | 3.06E-02 |
| 104 | GO:0006364: rRNA processing | 3.40E-02 |
| 105 | GO:0048316: seed development | 3.92E-02 |
| 106 | GO:0009620: response to fungus | 4.10E-02 |
| 107 | GO:0009553: embryo sac development | 4.28E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004588: orotate phosphoribosyltransferase activity | 0.00E+00 |
| 2 | GO:0004590: orotidine-5'-phosphate decarboxylase activity | 0.00E+00 |
| 3 | GO:0046523: S-methyl-5-thioribose-1-phosphate isomerase activity | 0.00E+00 |
| 4 | GO:0004418: hydroxymethylbilane synthase activity | 0.00E+00 |
| 5 | GO:0004823: leucine-tRNA ligase activity | 0.00E+00 |
| 6 | GO:0004636: phosphoribosyl-ATP diphosphatase activity | 0.00E+00 |
| 7 | GO:0015267: channel activity | 0.00E+00 |
| 8 | GO:0005048: signal sequence binding | 0.00E+00 |
| 9 | GO:0004019: adenylosuccinate synthase activity | 0.00E+00 |
| 10 | GO:0010303: limit dextrinase activity | 0.00E+00 |
| 11 | GO:0004635: phosphoribosyl-AMP cyclohydrolase activity | 0.00E+00 |
| 12 | GO:0004561: alpha-N-acetylglucosaminidase activity | 0.00E+00 |
| 13 | GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity | 0.00E+00 |
| 14 | GO:0051060: pullulanase activity | 0.00E+00 |
| 15 | GO:0008237: metallopeptidase activity | 7.71E-08 |
| 16 | GO:0004176: ATP-dependent peptidase activity | 4.07E-07 |
| 17 | GO:0004326: tetrahydrofolylpolyglutamate synthase activity | 7.96E-07 |
| 18 | GO:0044183: protein binding involved in protein folding | 4.56E-06 |
| 19 | GO:0004556: alpha-amylase activity | 3.28E-05 |
| 20 | GO:0003723: RNA binding | 1.03E-04 |
| 21 | GO:0004347: glucose-6-phosphate isomerase activity | 1.25E-04 |
| 22 | GO:0003864: 3-methyl-2-oxobutanoate hydroxymethyltransferase activity | 1.25E-04 |
| 23 | GO:0004813: alanine-tRNA ligase activity | 1.25E-04 |
| 24 | GO:0004222: metalloendopeptidase activity | 2.02E-04 |
| 25 | GO:0005525: GTP binding | 2.82E-04 |
| 26 | GO:0019156: isoamylase activity | 2.90E-04 |
| 27 | GO:0002161: aminoacyl-tRNA editing activity | 4.78E-04 |
| 28 | GO:0016149: translation release factor activity, codon specific | 6.85E-04 |
| 29 | GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity | 6.85E-04 |
| 30 | GO:0043023: ribosomal large subunit binding | 6.85E-04 |
| 31 | GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity | 6.85E-04 |
| 32 | GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity | 6.85E-04 |
| 33 | GO:0051082: unfolded protein binding | 7.83E-04 |
| 34 | GO:0008891: glycolate oxidase activity | 9.08E-04 |
| 35 | GO:0004659: prenyltransferase activity | 9.08E-04 |
| 36 | GO:0004045: aminoacyl-tRNA hydrolase activity | 9.08E-04 |
| 37 | GO:0019843: rRNA binding | 1.03E-03 |
| 38 | GO:0045300: acyl-[acyl-carrier-protein] desaturase activity | 1.15E-03 |
| 39 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 1.15E-03 |
| 40 | GO:0004519: endonuclease activity | 1.22E-03 |
| 41 | GO:0080030: methyl indole-3-acetate esterase activity | 1.41E-03 |
| 42 | GO:0004332: fructose-bisphosphate aldolase activity | 1.41E-03 |
| 43 | GO:0004526: ribonuclease P activity | 1.41E-03 |
| 44 | GO:0016887: ATPase activity | 2.09E-03 |
| 45 | GO:0008312: 7S RNA binding | 2.29E-03 |
| 46 | GO:0003746: translation elongation factor activity | 2.43E-03 |
| 47 | GO:0003747: translation release factor activity | 2.95E-03 |
| 48 | GO:0000049: tRNA binding | 4.45E-03 |
| 49 | GO:0004565: beta-galactosidase activity | 4.86E-03 |
| 50 | GO:0008266: poly(U) RNA binding | 5.28E-03 |
| 51 | GO:0003924: GTPase activity | 5.75E-03 |
| 52 | GO:0005528: FK506 binding | 6.61E-03 |
| 53 | GO:0030570: pectate lyase activity | 8.56E-03 |
| 54 | GO:0004812: aminoacyl-tRNA ligase activity | 9.60E-03 |
| 55 | GO:0016853: isomerase activity | 1.12E-02 |
| 56 | GO:0010181: FMN binding | 1.12E-02 |
| 57 | GO:0003729: mRNA binding | 1.37E-02 |
| 58 | GO:0016413: O-acetyltransferase activity | 1.54E-02 |
| 59 | GO:0008168: methyltransferase activity | 1.54E-02 |
| 60 | GO:0016597: amino acid binding | 1.54E-02 |
| 61 | GO:0000287: magnesium ion binding | 1.57E-02 |
| 62 | GO:0030145: manganese ion binding | 2.15E-02 |
| 63 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 2.30E-02 |
| 64 | GO:0005524: ATP binding | 2.86E-02 |
| 65 | GO:0043621: protein self-association | 2.91E-02 |
| 66 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 3.07E-02 |
| 67 | GO:0003690: double-stranded DNA binding | 3.49E-02 |
| 68 | GO:0045735: nutrient reservoir activity | 3.83E-02 |
| 69 | GO:0015035: protein disulfide oxidoreductase activity | 4.47E-02 |
| 70 | GO:0008026: ATP-dependent helicase activity | 4.56E-02 |