Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G50700

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0046719: regulation by virus of viral protein levels in host cell0.00E+00
2GO:1901698: response to nitrogen compound0.00E+00
3GO:0097164: ammonium ion metabolic process0.00E+00
4GO:0010480: microsporocyte differentiation8.43E-05
5GO:0033206: meiotic cytokinesis8.43E-05
6GO:0034757: negative regulation of iron ion transport8.43E-05
7GO:0070981: L-asparagine biosynthetic process2.00E-04
8GO:0010271: regulation of chlorophyll catabolic process2.00E-04
9GO:0000256: allantoin catabolic process2.00E-04
10GO:0006529: asparagine biosynthetic process2.00E-04
11GO:0080117: secondary growth3.35E-04
12GO:0010136: ureide catabolic process3.35E-04
13GO:0071705: nitrogen compound transport3.35E-04
14GO:0009800: cinnamic acid biosynthetic process4.84E-04
15GO:0009650: UV protection4.84E-04
16GO:0046739: transport of virus in multicellular host4.84E-04
17GO:0006145: purine nucleobase catabolic process4.84E-04
18GO:2000038: regulation of stomatal complex development6.44E-04
19GO:1900864: mitochondrial RNA modification6.44E-04
20GO:0071249: cellular response to nitrate6.44E-04
21GO:1902183: regulation of shoot apical meristem development8.14E-04
22GO:0010438: cellular response to sulfur starvation8.14E-04
23GO:0032876: negative regulation of DNA endoreduplication8.14E-04
24GO:0030308: negative regulation of cell growth8.14E-04
25GO:0071493: cellular response to UV-B8.14E-04
26GO:0010029: regulation of seed germination9.39E-04
27GO:0048831: regulation of shoot system development9.94E-04
28GO:0042176: regulation of protein catabolic process9.94E-04
29GO:0006559: L-phenylalanine catabolic process9.94E-04
30GO:0009416: response to light stimulus1.13E-03
31GO:0048509: regulation of meristem development1.18E-03
32GO:2000037: regulation of stomatal complex patterning1.18E-03
33GO:2000033: regulation of seed dormancy process1.18E-03
34GO:0010444: guard mother cell differentiation1.39E-03
35GO:0009610: response to symbiotic fungus1.39E-03
36GO:0048437: floral organ development1.39E-03
37GO:0009938: negative regulation of gibberellic acid mediated signaling pathway1.60E-03
38GO:0010439: regulation of glucosinolate biosynthetic process1.60E-03
39GO:0042255: ribosome assembly1.60E-03
40GO:0046620: regulation of organ growth1.60E-03
41GO:0070413: trehalose metabolism in response to stress1.60E-03
42GO:0010497: plasmodesmata-mediated intercellular transport1.83E-03
43GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway1.85E-03
44GO:2000024: regulation of leaf development2.06E-03
45GO:0048507: meristem development2.06E-03
46GO:0042538: hyperosmotic salinity response2.30E-03
47GO:0006995: cellular response to nitrogen starvation2.56E-03
48GO:0048229: gametophyte development2.82E-03
49GO:0009682: induced systemic resistance2.82E-03
50GO:0015706: nitrate transport3.09E-03
51GO:0008361: regulation of cell size3.09E-03
52GO:0010075: regulation of meristem growth3.37E-03
53GO:0009934: regulation of meristem structural organization3.66E-03
54GO:0010143: cutin biosynthetic process3.66E-03
55GO:0006541: glutamine metabolic process3.66E-03
56GO:0010167: response to nitrate3.95E-03
57GO:0006071: glycerol metabolic process4.26E-03
58GO:0009734: auxin-activated signaling pathway4.48E-03
59GO:0009944: polarity specification of adaxial/abaxial axis4.57E-03
60GO:2000377: regulation of reactive oxygen species metabolic process4.57E-03
61GO:0005992: trehalose biosynthetic process4.57E-03
62GO:0009863: salicylic acid mediated signaling pathway4.57E-03
63GO:0010187: negative regulation of seed germination4.57E-03
64GO:0009625: response to insect5.89E-03
65GO:0071215: cellular response to abscisic acid stimulus5.89E-03
66GO:0042127: regulation of cell proliferation6.24E-03
67GO:0006284: base-excision repair6.24E-03
68GO:0070417: cellular response to cold6.60E-03
69GO:0010501: RNA secondary structure unwinding6.97E-03
70GO:0010087: phloem or xylem histogenesis6.97E-03
71GO:0048653: anther development6.97E-03
72GO:0042631: cellular response to water deprivation6.97E-03
73GO:0008380: RNA splicing7.18E-03
74GO:0046323: glucose import7.34E-03
75GO:0010305: leaf vascular tissue pattern formation7.34E-03
76GO:0007018: microtubule-based movement7.72E-03
77GO:0009646: response to absence of light7.72E-03
78GO:0032502: developmental process8.90E-03
79GO:0071281: cellular response to iron ion9.30E-03
80GO:0010090: trichome morphogenesis9.30E-03
81GO:0006970: response to osmotic stress1.00E-02
82GO:0009723: response to ethylene1.08E-02
83GO:0000160: phosphorelay signal transduction system1.37E-02
84GO:0010218: response to far red light1.42E-02
85GO:0006811: ion transport1.42E-02
86GO:0009414: response to water deprivation1.43E-02
87GO:0009910: negative regulation of flower development1.47E-02
88GO:0009867: jasmonic acid mediated signaling pathway1.57E-02
89GO:0030154: cell differentiation1.64E-02
90GO:0006629: lipid metabolic process1.71E-02
91GO:0030001: metal ion transport1.72E-02
92GO:0016567: protein ubiquitination1.77E-02
93GO:0009926: auxin polar transport1.88E-02
94GO:0009640: photomorphogenesis1.88E-02
95GO:0009636: response to toxic substance2.04E-02
96GO:0031347: regulation of defense response2.15E-02
97GO:0009736: cytokinin-activated signaling pathway2.32E-02
98GO:0006355: regulation of transcription, DNA-templated2.39E-02
99GO:0009909: regulation of flower development2.50E-02
100GO:0048316: seed development2.68E-02
101GO:0009908: flower development2.75E-02
102GO:0009740: gibberellic acid mediated signaling pathway2.86E-02
103GO:0051726: regulation of cell cycle3.11E-02
104GO:0006412: translation3.90E-02
105GO:0009790: embryo development3.91E-02
106GO:0009739: response to gibberellin4.77E-02
107GO:0009617: response to bacterium4.99E-02
RankGO TermAdjusted P value
1GO:0004038: allantoinase activity0.00E+00
2GO:0004071: aspartate-ammonia ligase activity8.43E-05
3GO:0005089: Rho guanyl-nucleotide exchange factor activity1.18E-04
4GO:0009884: cytokinin receptor activity2.00E-04
5GO:0004066: asparagine synthase (glutamine-hydrolyzing) activity2.00E-04
6GO:0016805: dipeptidase activity3.35E-04
7GO:0005034: osmosensor activity3.35E-04
8GO:0004180: carboxypeptidase activity3.35E-04
9GO:0052722: fatty acid in-chain hydroxylase activity3.35E-04
10GO:0045548: phenylalanine ammonia-lyase activity3.35E-04
11GO:0003727: single-stranded RNA binding4.05E-04
12GO:0005354: galactose transmembrane transporter activity4.84E-04
13GO:0008725: DNA-3-methyladenine glycosylase activity8.14E-04
14GO:0019900: kinase binding1.18E-03
15GO:0003697: single-stranded DNA binding1.44E-03
16GO:0008970: phosphatidylcholine 1-acylhydrolase activity1.83E-03
17GO:0000989: transcription factor activity, transcription factor binding2.06E-03
18GO:0008889: glycerophosphodiester phosphodiesterase activity2.06E-03
19GO:0004871: signal transducer activity2.36E-03
20GO:0003690: double-stranded DNA binding2.55E-03
21GO:0004673: protein histidine kinase activity2.56E-03
22GO:0004805: trehalose-phosphatase activity2.56E-03
23GO:0004022: alcohol dehydrogenase (NAD) activity3.37E-03
24GO:0000155: phosphorelay sensor kinase activity3.37E-03
25GO:0042973: glucan endo-1,3-beta-D-glucosidase activity3.66E-03
26GO:0019843: rRNA binding4.37E-03
27GO:0043424: protein histidine kinase binding4.89E-03
28GO:0005345: purine nucleobase transmembrane transporter activity4.89E-03
29GO:0033612: receptor serine/threonine kinase binding5.22E-03
30GO:0003700: transcription factor activity, sequence-specific DNA binding7.13E-03
31GO:0001085: RNA polymerase II transcription factor binding7.34E-03
32GO:0005355: glucose transmembrane transporter activity7.72E-03
33GO:0003735: structural constituent of ribosome9.34E-03
34GO:0016759: cellulose synthase activity9.72E-03
35GO:0016791: phosphatase activity9.72E-03
36GO:0004004: ATP-dependent RNA helicase activity1.23E-02
37GO:0004806: triglyceride lipase activity1.23E-02
38GO:0004693: cyclin-dependent protein serine/threonine kinase activity1.42E-02
39GO:0050897: cobalt ion binding1.47E-02
40GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding1.47E-02
41GO:0004712: protein serine/threonine/tyrosine kinase activity1.67E-02
42GO:0051537: 2 iron, 2 sulfur cluster binding1.99E-02
43GO:0043621: protein self-association1.99E-02
44GO:0003729: mRNA binding2.43E-02
45GO:0003777: microtubule motor activity2.50E-02
46GO:0008026: ATP-dependent helicase activity3.11E-02
47GO:0043565: sequence-specific DNA binding3.80E-02
48GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding3.84E-02
49GO:0015144: carbohydrate transmembrane transporter activity3.98E-02
50GO:0005351: sugar:proton symporter activity4.33E-02
51GO:0008017: microtubule binding4.55E-02
52GO:0008194: UDP-glycosyltransferase activity4.77E-02
53GO:0005515: protein binding4.94E-02
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Gene type



Gene DE type