Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G50560

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:2000121: regulation of removal of superoxide radicals0.00E+00
2GO:0006480: N-terminal protein amino acid methylation0.00E+00
3GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity4.23E-06
4GO:0051247: positive regulation of protein metabolic process2.88E-05
5GO:2000905: negative regulation of starch metabolic process2.88E-05
6GO:0048586: regulation of long-day photoperiodism, flowering1.27E-04
7GO:0009963: positive regulation of flavonoid biosynthetic process1.89E-04
8GO:0009647: skotomorphogenesis1.89E-04
9GO:0006168: adenine salvage1.89E-04
10GO:0006166: purine ribonucleoside salvage1.89E-04
11GO:0009649: entrainment of circadian clock2.57E-04
12GO:2000306: positive regulation of photomorphogenesis2.57E-04
13GO:0048573: photoperiodism, flowering2.70E-04
14GO:0034052: positive regulation of plant-type hypersensitive response3.30E-04
15GO:0046283: anthocyanin-containing compound metabolic process3.30E-04
16GO:0044209: AMP salvage3.30E-04
17GO:0006665: sphingolipid metabolic process3.30E-04
18GO:1902456: regulation of stomatal opening4.06E-04
19GO:0006751: glutathione catabolic process4.06E-04
20GO:0010189: vitamin E biosynthetic process4.86E-04
21GO:0043068: positive regulation of programmed cell death6.55E-04
22GO:0009051: pentose-phosphate shunt, oxidative branch8.35E-04
23GO:0051726: regulation of cell cycle9.59E-04
24GO:0009641: shade avoidance1.03E-03
25GO:0009416: response to light stimulus1.03E-03
26GO:0019915: lipid storage2.04E-03
27GO:0009814: defense response, incompatible interaction2.17E-03
28GO:0007049: cell cycle2.61E-03
29GO:0010118: stomatal movement2.70E-03
30GO:0030154: cell differentiation2.77E-03
31GO:0008654: phospholipid biosynthetic process3.13E-03
32GO:0071554: cell wall organization or biogenesis3.28E-03
33GO:0016125: sterol metabolic process3.73E-03
34GO:0010029: regulation of seed germination4.37E-03
35GO:0010119: regulation of stomatal movement5.58E-03
36GO:0009853: photorespiration5.94E-03
37GO:0009640: photomorphogenesis7.08E-03
38GO:0051707: response to other organism7.08E-03
39GO:0051301: cell division8.18E-03
40GO:0009585: red, far-red light phototransduction8.71E-03
41GO:0010224: response to UV-B8.92E-03
42GO:0009909: regulation of flower development9.36E-03
43GO:0048367: shoot system development1.00E-02
44GO:0009626: plant-type hypersensitive response1.02E-02
45GO:0009740: gibberellic acid mediated signaling pathway1.07E-02
46GO:0007623: circadian rhythm1.64E-02
47GO:0010228: vegetative to reproductive phase transition of meristem1.70E-02
48GO:0010468: regulation of gene expression1.86E-02
49GO:0009658: chloroplast organization2.24E-02
50GO:0045892: negative regulation of transcription, DNA-templated3.00E-02
51GO:0006869: lipid transport3.17E-02
52GO:0009737: response to abscisic acid3.25E-02
53GO:0009751: response to salicylic acid3.41E-02
54GO:0006281: DNA repair3.45E-02
55GO:0009753: response to jasmonic acid3.62E-02
56GO:0006357: regulation of transcription from RNA polymerase II promoter4.21E-02
57GO:0016567: protein ubiquitination4.63E-02
RankGO TermAdjusted P value
1GO:0010276: phytol kinase activity0.00E+00
2GO:0003839: gamma-glutamylcyclotransferase activity7.28E-05
3GO:0019901: protein kinase binding1.44E-04
4GO:0003999: adenine phosphoribosyltransferase activity1.89E-04
5GO:0017057: 6-phosphogluconolactonase activity1.89E-04
6GO:0004693: cyclin-dependent protein serine/threonine kinase activity3.31E-04
7GO:0004605: phosphatidate cytidylyltransferase activity4.06E-04
8GO:0001085: RNA polymerase II transcription factor binding2.84E-03
9GO:0016413: O-acetyltransferase activity4.05E-03
10GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding5.58E-03
11GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen1.33E-02
12GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding1.43E-02
13GO:0008270: zinc ion binding1.65E-02
14GO:0042802: identical protein binding1.95E-02
15GO:0004842: ubiquitin-protein transferase activity2.11E-02
16GO:0046982: protein heterodimerization activity2.21E-02
17GO:0003682: chromatin binding2.33E-02
18GO:0004497: monooxygenase activity2.61E-02
19GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting2.97E-02
20GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding3.20E-02
21GO:0008289: lipid binding4.36E-02
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Gene type



Gene DE type