Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G50480

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1902009: positive regulation of toxin transport0.00E+00
2GO:0010324: membrane invagination0.00E+00
3GO:0071327: cellular response to trehalose stimulus0.00E+00
4GO:0043048: dolichyl monophosphate biosynthetic process0.00E+00
5GO:0010647: positive regulation of cell communication0.00E+00
6GO:1902001: fatty acid transmembrane transport0.00E+00
7GO:1902289: negative regulation of defense response to oomycetes0.00E+00
8GO:0098755: maintenance of seed dormancy by absisic acid0.00E+00
9GO:1900367: positive regulation of defense response to insect0.00E+00
10GO:2000378: negative regulation of reactive oxygen species metabolic process0.00E+00
11GO:0002764: immune response-regulating signaling pathway0.00E+00
12GO:0010200: response to chitin2.28E-09
13GO:0009617: response to bacterium4.03E-07
14GO:0019725: cellular homeostasis9.42E-06
15GO:0010150: leaf senescence2.39E-05
16GO:0006468: protein phosphorylation4.48E-05
17GO:0060548: negative regulation of cell death1.22E-04
18GO:0009266: response to temperature stimulus1.69E-04
19GO:0010225: response to UV-C1.87E-04
20GO:0009816: defense response to bacterium, incompatible interaction2.01E-04
21GO:0006470: protein dephosphorylation2.32E-04
22GO:0006979: response to oxidative stress2.50E-04
23GO:0006886: intracellular protein transport2.57E-04
24GO:0009759: indole glucosinolate biosynthetic process2.65E-04
25GO:0009751: response to salicylic acid3.81E-04
26GO:0031348: negative regulation of defense response3.97E-04
27GO:1900056: negative regulation of leaf senescence4.58E-04
28GO:0006643: membrane lipid metabolic process4.62E-04
29GO:0048508: embryonic meristem development4.62E-04
30GO:0051938: L-glutamate import4.62E-04
31GO:0015969: guanosine tetraphosphate metabolic process4.62E-04
32GO:0010421: hydrogen peroxide-mediated programmed cell death4.62E-04
33GO:1901430: positive regulation of syringal lignin biosynthetic process4.62E-04
34GO:0010482: regulation of epidermal cell division4.62E-04
35GO:1901183: positive regulation of camalexin biosynthetic process4.62E-04
36GO:0009270: response to humidity4.62E-04
37GO:0035556: intracellular signal transduction4.76E-04
38GO:1900150: regulation of defense response to fungus5.71E-04
39GO:0046777: protein autophosphorylation7.87E-04
40GO:0009737: response to abscisic acid8.07E-04
41GO:1900426: positive regulation of defense response to bacterium9.81E-04
42GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway9.81E-04
43GO:0031349: positive regulation of defense response9.96E-04
44GO:0009945: radial axis specification9.96E-04
45GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine9.96E-04
46GO:0045905: positive regulation of translational termination9.96E-04
47GO:0071668: plant-type cell wall assembly9.96E-04
48GO:0034243: regulation of transcription elongation from RNA polymerase II promoter9.96E-04
49GO:0043091: L-arginine import9.96E-04
50GO:0006597: spermine biosynthetic process9.96E-04
51GO:0015914: phospholipid transport9.96E-04
52GO:0045901: positive regulation of translational elongation9.96E-04
53GO:0080151: positive regulation of salicylic acid mediated signaling pathway9.96E-04
54GO:0009838: abscission9.96E-04
55GO:0015802: basic amino acid transport9.96E-04
56GO:0080185: effector dependent induction by symbiont of host immune response9.96E-04
57GO:0010618: aerenchyma formation9.96E-04
58GO:0055088: lipid homeostasis9.96E-04
59GO:0006452: translational frameshifting9.96E-04
60GO:0000719: photoreactive repair9.96E-04
61GO:0015908: fatty acid transport9.96E-04
62GO:0044419: interspecies interaction between organisms9.96E-04
63GO:0006032: chitin catabolic process1.14E-03
64GO:0001666: response to hypoxia1.39E-03
65GO:0009626: plant-type hypersensitive response1.40E-03
66GO:0015031: protein transport1.44E-03
67GO:0008361: regulation of cell size1.51E-03
68GO:0002230: positive regulation of defense response to virus by host1.62E-03
69GO:0044375: regulation of peroxisome size1.62E-03
70GO:0045793: positive regulation of cell size1.62E-03
71GO:0010186: positive regulation of cellular defense response1.62E-03
72GO:0032786: positive regulation of DNA-templated transcription, elongation1.62E-03
73GO:0009653: anatomical structure morphogenesis1.62E-03
74GO:0006048: UDP-N-acetylglucosamine biosynthetic process1.62E-03
75GO:0016045: detection of bacterium1.62E-03
76GO:1900140: regulation of seedling development1.62E-03
77GO:0010359: regulation of anion channel activity1.62E-03
78GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway1.62E-03
79GO:0018105: peptidyl-serine phosphorylation1.76E-03
80GO:0007034: vacuolar transport1.93E-03
81GO:0042742: defense response to bacterium2.29E-03
82GO:0051289: protein homotetramerization2.35E-03
83GO:1902290: positive regulation of defense response to oomycetes2.35E-03
84GO:0007568: aging2.35E-03
85GO:0034219: carbohydrate transmembrane transport2.35E-03
86GO:0072334: UDP-galactose transmembrane transport2.35E-03
87GO:0015749: monosaccharide transport2.35E-03
88GO:0030100: regulation of endocytosis2.35E-03
89GO:0072583: clathrin-dependent endocytosis2.35E-03
90GO:0015696: ammonium transport2.35E-03
91GO:0016192: vesicle-mediated transport2.98E-03
92GO:0010188: response to microbial phytotoxin3.16E-03
93GO:0080142: regulation of salicylic acid biosynthetic process3.16E-03
94GO:0046345: abscisic acid catabolic process3.16E-03
95GO:0010483: pollen tube reception3.16E-03
96GO:0009652: thigmotropism3.16E-03
97GO:1902584: positive regulation of response to water deprivation3.16E-03
98GO:0072488: ammonium transmembrane transport3.16E-03
99GO:0006621: protein retention in ER lumen3.16E-03
100GO:0051567: histone H3-K9 methylation3.16E-03
101GO:0010508: positive regulation of autophagy3.16E-03
102GO:0016998: cell wall macromolecule catabolic process3.25E-03
103GO:0006897: endocytosis3.29E-03
104GO:0071456: cellular response to hypoxia3.56E-03
105GO:2000022: regulation of jasmonic acid mediated signaling pathway3.56E-03
106GO:0009625: response to insect3.89E-03
107GO:0097428: protein maturation by iron-sulfur cluster transfer4.05E-03
108GO:0045927: positive regulation of growth4.05E-03
109GO:0034052: positive regulation of plant-type hypersensitive response4.05E-03
110GO:0009306: protein secretion4.23E-03
111GO:0009611: response to wounding4.85E-03
112GO:0006574: valine catabolic process5.02E-03
113GO:0010942: positive regulation of cell death5.02E-03
114GO:1900425: negative regulation of defense response to bacterium5.02E-03
115GO:0006596: polyamine biosynthetic process5.02E-03
116GO:0006662: glycerol ether metabolic process5.35E-03
117GO:0046323: glucose import5.35E-03
118GO:0009809: lignin biosynthetic process5.35E-03
119GO:0006952: defense response5.89E-03
120GO:0009942: longitudinal axis specification6.06E-03
121GO:0048509: regulation of meristem development6.06E-03
122GO:0031930: mitochondria-nucleus signaling pathway6.06E-03
123GO:0010555: response to mannitol6.06E-03
124GO:0010310: regulation of hydrogen peroxide metabolic process6.06E-03
125GO:2000067: regulation of root morphogenesis6.06E-03
126GO:0042372: phylloquinone biosynthetic process6.06E-03
127GO:0045926: negative regulation of growth6.06E-03
128GO:0009612: response to mechanical stimulus6.06E-03
129GO:0034389: lipid particle organization6.06E-03
130GO:0009749: response to glucose6.17E-03
131GO:0050829: defense response to Gram-negative bacterium7.16E-03
132GO:0010044: response to aluminum ion7.16E-03
133GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway7.16E-03
134GO:0046470: phosphatidylcholine metabolic process7.16E-03
135GO:0043090: amino acid import7.16E-03
136GO:0080186: developmental vegetative growth7.16E-03
137GO:1900057: positive regulation of leaf senescence7.16E-03
138GO:0009620: response to fungus7.48E-03
139GO:0006605: protein targeting8.33E-03
140GO:0030162: regulation of proteolysis8.33E-03
141GO:0016559: peroxisome fission8.33E-03
142GO:0009787: regulation of abscisic acid-activated signaling pathway8.33E-03
143GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline8.33E-03
144GO:0009819: drought recovery8.33E-03
145GO:0006904: vesicle docking involved in exocytosis8.53E-03
146GO:0010204: defense response signaling pathway, resistance gene-independent9.57E-03
147GO:2000031: regulation of salicylic acid mediated signaling pathway9.57E-03
148GO:0010208: pollen wall assembly9.57E-03
149GO:0010099: regulation of photomorphogenesis9.57E-03
150GO:0007186: G-protein coupled receptor signaling pathway9.57E-03
151GO:0010120: camalexin biosynthetic process9.57E-03
152GO:0010497: plasmodesmata-mediated intercellular transport9.57E-03
153GO:0009627: systemic acquired resistance1.07E-02
154GO:0010112: regulation of systemic acquired resistance1.09E-02
155GO:0009821: alkaloid biosynthetic process1.09E-02
156GO:0006098: pentose-phosphate shunt1.09E-02
157GO:0030042: actin filament depolymerization1.22E-02
158GO:0006325: chromatin organization1.37E-02
159GO:0009738: abscisic acid-activated signaling pathway1.39E-02
160GO:0009407: toxin catabolic process1.39E-02
161GO:0045892: negative regulation of transcription, DNA-templated1.41E-02
162GO:0009750: response to fructose1.51E-02
163GO:0048765: root hair cell differentiation1.51E-02
164GO:0019684: photosynthesis, light reaction1.51E-02
165GO:0009682: induced systemic resistance1.51E-02
166GO:0043085: positive regulation of catalytic activity1.51E-02
167GO:0052544: defense response by callose deposition in cell wall1.51E-02
168GO:0034599: cellular response to oxidative stress1.67E-02
169GO:0010105: negative regulation of ethylene-activated signaling pathway1.67E-02
170GO:0012501: programmed cell death1.67E-02
171GO:0002213: defense response to insect1.67E-02
172GO:0009414: response to water deprivation1.75E-02
173GO:0055046: microgametogenesis1.82E-02
174GO:2000012: regulation of auxin polar transport1.82E-02
175GO:0002237: response to molecule of bacterial origin1.99E-02
176GO:0007166: cell surface receptor signaling pathway2.00E-02
177GO:0009744: response to sucrose2.06E-02
178GO:0009753: response to jasmonic acid2.10E-02
179GO:0010053: root epidermal cell differentiation2.16E-02
180GO:0007031: peroxisome organization2.16E-02
181GO:0007030: Golgi organization2.16E-02
182GO:0046688: response to copper ion2.16E-02
183GO:0010167: response to nitrate2.16E-02
184GO:0009636: response to toxic substance2.32E-02
185GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process2.50E-02
186GO:2000377: regulation of reactive oxygen species metabolic process2.51E-02
187GO:0080147: root hair cell development2.51E-02
188GO:0009863: salicylic acid mediated signaling pathway2.51E-02
189GO:0030150: protein import into mitochondrial matrix2.51E-02
190GO:0006825: copper ion transport2.69E-02
191GO:0051302: regulation of cell division2.69E-02
192GO:0010026: trichome differentiation2.69E-02
193GO:0003333: amino acid transmembrane transport2.88E-02
194GO:0010431: seed maturation2.88E-02
195GO:0019915: lipid storage2.88E-02
196GO:0048278: vesicle docking2.88E-02
197GO:0035428: hexose transmembrane transport3.07E-02
198GO:0030245: cellulose catabolic process3.07E-02
199GO:0009411: response to UV3.27E-02
200GO:0006012: galactose metabolic process3.27E-02
201GO:0010089: xylem development3.47E-02
202GO:0010584: pollen exine formation3.47E-02
203GO:0009789: positive regulation of abscisic acid-activated signaling pathway3.67E-02
204GO:0009651: response to salt stress3.71E-02
205GO:0000413: protein peptidyl-prolyl isomerization3.88E-02
206GO:0010118: stomatal movement3.88E-02
207GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway3.98E-02
208GO:0061025: membrane fusion4.31E-02
209GO:0009646: response to absence of light4.31E-02
210GO:0008654: phospholipid biosynthetic process4.53E-02
211GO:0071554: cell wall organization or biogenesis4.75E-02
212GO:0045454: cell redox homeostasis4.76E-02
213GO:0007264: small GTPase mediated signal transduction4.98E-02
214GO:0016032: viral process4.98E-02
RankGO TermAdjusted P value
1GO:0004168: dolichol kinase activity0.00E+00
2GO:0004610: phosphoacetylglucosamine mutase activity0.00E+00
3GO:0005358: high-affinity hydrogen:glucose symporter activity0.00E+00
4GO:0008320: protein transmembrane transporter activity2.01E-07
5GO:0004672: protein kinase activity1.68E-05
6GO:0009931: calcium-dependent protein serine/threonine kinase activity2.21E-04
7GO:0004683: calmodulin-dependent protein kinase activity2.42E-04
8GO:0016301: kinase activity4.24E-04
9GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity4.62E-04
10GO:0016768: spermine synthase activity4.62E-04
11GO:2001147: camalexin binding4.62E-04
12GO:0015245: fatty acid transporter activity4.62E-04
13GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity4.62E-04
14GO:0009679: hexose:proton symporter activity4.62E-04
15GO:0032050: clathrin heavy chain binding4.62E-04
16GO:2001227: quercitrin binding4.62E-04
17GO:1901149: salicylic acid binding4.62E-04
18GO:0015398: high-affinity secondary active ammonium transmembrane transporter activity4.62E-04
19GO:0004714: transmembrane receptor protein tyrosine kinase activity5.71E-04
20GO:0005509: calcium ion binding6.29E-04
21GO:0008728: GTP diphosphokinase activity9.96E-04
22GO:0004766: spermidine synthase activity9.96E-04
23GO:0015036: disulfide oxidoreductase activity9.96E-04
24GO:0004568: chitinase activity1.14E-03
25GO:0004722: protein serine/threonine phosphatase activity1.18E-03
26GO:0031683: G-protein beta/gamma-subunit complex binding1.62E-03
27GO:0001664: G-protein coupled receptor binding1.62E-03
28GO:0008442: 3-hydroxyisobutyrate dehydrogenase activity1.62E-03
29GO:0016531: copper chaperone activity1.62E-03
30GO:0004806: triglyceride lipase activity1.71E-03
31GO:0004674: protein serine/threonine kinase activity1.79E-03
32GO:0016656: monodehydroascorbate reductase (NADH) activity2.35E-03
33GO:0015189: L-lysine transmembrane transporter activity2.35E-03
34GO:0015181: arginine transmembrane transporter activity2.35E-03
35GO:0003746: translation elongation factor activity2.64E-03
36GO:0000993: RNA polymerase II core binding3.16E-03
37GO:0046923: ER retention sequence binding3.16E-03
38GO:0005313: L-glutamate transmembrane transporter activity3.16E-03
39GO:0019199: transmembrane receptor protein kinase activity3.16E-03
40GO:0005496: steroid binding4.05E-03
41GO:0070696: transmembrane receptor protein serine/threonine kinase binding4.05E-03
42GO:0010294: abscisic acid glucosyltransferase activity4.05E-03
43GO:0005459: UDP-galactose transmembrane transporter activity4.05E-03
44GO:0015145: monosaccharide transmembrane transporter activity4.05E-03
45GO:0005546: phosphatidylinositol-4,5-bisphosphate binding4.05E-03
46GO:0004871: signal transducer activity4.07E-03
47GO:0047134: protein-disulfide reductase activity4.58E-03
48GO:0008519: ammonium transmembrane transporter activity5.02E-03
49GO:0004605: phosphatidate cytidylyltransferase activity5.02E-03
50GO:0004791: thioredoxin-disulfide reductase activity5.75E-03
51GO:0003978: UDP-glucose 4-epimerase activity6.06E-03
52GO:0004656: procollagen-proline 4-dioxygenase activity6.06E-03
53GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity6.06E-03
54GO:0043295: glutathione binding7.16E-03
55GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor7.53E-03
56GO:0043022: ribosome binding8.33E-03
57GO:0005544: calcium-dependent phospholipid binding8.33E-03
58GO:0005524: ATP binding8.38E-03
59GO:0015035: protein disulfide oxidoreductase activity8.72E-03
60GO:0016746: transferase activity, transferring acyl groups8.72E-03
61GO:0004630: phospholipase D activity9.57E-03
62GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity9.57E-03
63GO:0008375: acetylglucosaminyltransferase activity1.07E-02
64GO:0071949: FAD binding1.09E-02
65GO:0047617: acyl-CoA hydrolase activity1.22E-02
66GO:0016844: strictosidine synthase activity1.22E-02
67GO:0015174: basic amino acid transmembrane transporter activity1.22E-02
68GO:0005525: GTP binding1.23E-02
69GO:0008171: O-methyltransferase activity1.37E-02
70GO:0008047: enzyme activator activity1.37E-02
71GO:0004713: protein tyrosine kinase activity1.37E-02
72GO:0008794: arsenate reductase (glutaredoxin) activity1.51E-02
73GO:0005543: phospholipid binding1.51E-02
74GO:0004675: transmembrane receptor protein serine/threonine kinase activity1.54E-02
75GO:0004712: protein serine/threonine/tyrosine kinase activity1.74E-02
76GO:0004022: alcohol dehydrogenase (NAD) activity1.82E-02
77GO:0004364: glutathione transferase activity1.98E-02
78GO:0051119: sugar transmembrane transporter activity2.16E-02
79GO:0005198: structural molecule activity2.32E-02
80GO:0051536: iron-sulfur cluster binding2.51E-02
81GO:0031418: L-ascorbic acid binding2.51E-02
82GO:0043424: protein histidine kinase binding2.69E-02
83GO:0019706: protein-cysteine S-palmitoyltransferase activity2.88E-02
84GO:0033612: receptor serine/threonine kinase binding2.88E-02
85GO:0008234: cysteine-type peptidase activity3.08E-02
86GO:0015171: amino acid transmembrane transporter activity3.08E-02
87GO:0008810: cellulase activity3.27E-02
88GO:0003727: single-stranded RNA binding3.47E-02
89GO:0005355: glucose transmembrane transporter activity4.31E-02
90GO:0050662: coenzyme binding4.31E-02
91GO:0043565: sequence-specific DNA binding4.51E-02
92GO:0004872: receptor activity4.53E-02
93GO:0019901: protein kinase binding4.53E-02
94GO:0004197: cysteine-type endopeptidase activity4.98E-02
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Gene type



Gene DE type