GO Enrichment Analysis of Co-expressed Genes with
AT3G48970
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009606: tropism | 0.00E+00 |
| 2 | GO:0090322: regulation of superoxide metabolic process | 0.00E+00 |
| 3 | GO:0019988: charged-tRNA amino acid modification | 0.00E+00 |
| 4 | GO:0042794: rRNA transcription from plastid promoter | 0.00E+00 |
| 5 | GO:0045014: negative regulation of transcription by glucose | 0.00E+00 |
| 6 | GO:0010569: regulation of double-strand break repair via homologous recombination | 2.37E-06 |
| 7 | GO:0009416: response to light stimulus | 1.15E-04 |
| 8 | GO:0042255: ribosome assembly | 1.97E-04 |
| 9 | GO:0006353: DNA-templated transcription, termination | 1.97E-04 |
| 10 | GO:0009733: response to auxin | 2.15E-04 |
| 11 | GO:1905039: carboxylic acid transmembrane transport | 2.25E-04 |
| 12 | GO:1905200: gibberellic acid transmembrane transport | 2.25E-04 |
| 13 | GO:0080112: seed growth | 2.25E-04 |
| 14 | GO:1903866: palisade mesophyll development | 2.25E-04 |
| 15 | GO:1900033: negative regulation of trichome patterning | 5.00E-04 |
| 16 | GO:0080009: mRNA methylation | 5.00E-04 |
| 17 | GO:2000123: positive regulation of stomatal complex development | 5.00E-04 |
| 18 | GO:2000071: regulation of defense response by callose deposition | 5.00E-04 |
| 19 | GO:0010588: cotyledon vascular tissue pattern formation | 6.19E-04 |
| 20 | GO:0080188: RNA-directed DNA methylation | 7.77E-04 |
| 21 | GO:0090391: granum assembly | 8.13E-04 |
| 22 | GO:0006518: peptide metabolic process | 8.13E-04 |
| 23 | GO:0006168: adenine salvage | 1.16E-03 |
| 24 | GO:1902290: positive regulation of defense response to oomycetes | 1.16E-03 |
| 25 | GO:0006166: purine ribonucleoside salvage | 1.16E-03 |
| 26 | GO:0031347: regulation of defense response | 1.21E-03 |
| 27 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 1.25E-03 |
| 28 | GO:0009734: auxin-activated signaling pathway | 1.51E-03 |
| 29 | GO:2000038: regulation of stomatal complex development | 1.54E-03 |
| 30 | GO:0048629: trichome patterning | 1.54E-03 |
| 31 | GO:0010118: stomatal movement | 1.73E-03 |
| 32 | GO:0080110: sporopollenin biosynthetic process | 1.97E-03 |
| 33 | GO:0044209: AMP salvage | 1.97E-03 |
| 34 | GO:0010375: stomatal complex patterning | 1.97E-03 |
| 35 | GO:1902456: regulation of stomatal opening | 2.43E-03 |
| 36 | GO:0042793: transcription from plastid promoter | 2.43E-03 |
| 37 | GO:0009643: photosynthetic acclimation | 2.43E-03 |
| 38 | GO:0016554: cytidine to uridine editing | 2.43E-03 |
| 39 | GO:0010315: auxin efflux | 2.43E-03 |
| 40 | GO:0035435: phosphate ion transmembrane transport | 2.43E-03 |
| 41 | GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity | 2.91E-03 |
| 42 | GO:0010310: regulation of hydrogen peroxide metabolic process | 2.91E-03 |
| 43 | GO:0010103: stomatal complex morphogenesis | 3.43E-03 |
| 44 | GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway | 3.43E-03 |
| 45 | GO:0010374: stomatal complex development | 3.43E-03 |
| 46 | GO:0052543: callose deposition in cell wall | 3.98E-03 |
| 47 | GO:0009787: regulation of abscisic acid-activated signaling pathway | 3.98E-03 |
| 48 | GO:0046620: regulation of organ growth | 3.98E-03 |
| 49 | GO:0048766: root hair initiation | 3.98E-03 |
| 50 | GO:0010052: guard cell differentiation | 4.56E-03 |
| 51 | GO:0007389: pattern specification process | 4.56E-03 |
| 52 | GO:0007186: G-protein coupled receptor signaling pathway | 4.56E-03 |
| 53 | GO:0048589: developmental growth | 5.16E-03 |
| 54 | GO:1900426: positive regulation of defense response to bacterium | 5.79E-03 |
| 55 | GO:1900865: chloroplast RNA modification | 5.79E-03 |
| 56 | GO:0009870: defense response signaling pathway, resistance gene-dependent | 6.45E-03 |
| 57 | GO:0006535: cysteine biosynthetic process from serine | 6.45E-03 |
| 58 | GO:0048829: root cap development | 6.45E-03 |
| 59 | GO:0031627: telomeric loop formation | 6.45E-03 |
| 60 | GO:0009926: auxin polar transport | 7.04E-03 |
| 61 | GO:1903507: negative regulation of nucleic acid-templated transcription | 7.13E-03 |
| 62 | GO:0009750: response to fructose | 7.13E-03 |
| 63 | GO:2000652: regulation of secondary cell wall biogenesis | 7.13E-03 |
| 64 | GO:0009682: induced systemic resistance | 7.13E-03 |
| 65 | GO:0015770: sucrose transport | 7.13E-03 |
| 66 | GO:0009658: chloroplast organization | 7.57E-03 |
| 67 | GO:0010152: pollen maturation | 7.84E-03 |
| 68 | GO:0012501: programmed cell death | 7.84E-03 |
| 69 | GO:0010102: lateral root morphogenesis | 8.57E-03 |
| 70 | GO:0010020: chloroplast fission | 9.33E-03 |
| 71 | GO:0009901: anther dehiscence | 1.01E-02 |
| 72 | GO:0048367: shoot system development | 1.16E-02 |
| 73 | GO:0080147: root hair cell development | 1.17E-02 |
| 74 | GO:0019344: cysteine biosynthetic process | 1.17E-02 |
| 75 | GO:0010073: meristem maintenance | 1.26E-02 |
| 76 | GO:0006874: cellular calcium ion homeostasis | 1.26E-02 |
| 77 | GO:0045892: negative regulation of transcription, DNA-templated | 1.28E-02 |
| 78 | GO:0003333: amino acid transmembrane transport | 1.34E-02 |
| 79 | GO:0010082: regulation of root meristem growth | 1.53E-02 |
| 80 | GO:0042127: regulation of cell proliferation | 1.62E-02 |
| 81 | GO:0010584: pollen exine formation | 1.62E-02 |
| 82 | GO:0048443: stamen development | 1.62E-02 |
| 83 | GO:0006284: base-excision repair | 1.62E-02 |
| 84 | GO:0080022: primary root development | 1.81E-02 |
| 85 | GO:0010087: phloem or xylem histogenesis | 1.81E-02 |
| 86 | GO:0009958: positive gravitropism | 1.91E-02 |
| 87 | GO:0010305: leaf vascular tissue pattern formation | 1.91E-02 |
| 88 | GO:0007018: microtubule-based movement | 2.01E-02 |
| 89 | GO:0009749: response to glucose | 2.11E-02 |
| 90 | GO:0080156: mitochondrial mRNA modification | 2.22E-02 |
| 91 | GO:0002229: defense response to oomycetes | 2.22E-02 |
| 92 | GO:0040008: regulation of growth | 2.24E-02 |
| 93 | GO:0019761: glucosinolate biosynthetic process | 2.32E-02 |
| 94 | GO:0032502: developmental process | 2.32E-02 |
| 95 | GO:0009630: gravitropism | 2.32E-02 |
| 96 | GO:0045490: pectin catabolic process | 2.35E-02 |
| 97 | GO:0030163: protein catabolic process | 2.43E-02 |
| 98 | GO:0010252: auxin homeostasis | 2.54E-02 |
| 99 | GO:0007267: cell-cell signaling | 2.65E-02 |
| 100 | GO:0008380: RNA splicing | 2.80E-02 |
| 101 | GO:0010027: thylakoid membrane organization | 2.88E-02 |
| 102 | GO:0006351: transcription, DNA-templated | 3.30E-02 |
| 103 | GO:0009555: pollen development | 3.35E-02 |
| 104 | GO:0048481: plant ovule development | 3.48E-02 |
| 105 | GO:0048767: root hair elongation | 3.61E-02 |
| 106 | GO:0006811: ion transport | 3.73E-02 |
| 107 | GO:0000724: double-strand break repair via homologous recombination | 3.99E-02 |
| 108 | GO:0006865: amino acid transport | 3.99E-02 |
| 109 | GO:0009867: jasmonic acid mediated signaling pathway | 4.12E-02 |
| 110 | GO:0030001: metal ion transport | 4.52E-02 |
| 111 | GO:0006839: mitochondrial transport | 4.52E-02 |
| 112 | GO:0009744: response to sucrose | 4.93E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0071633: dihydroceramidase activity | 0.00E+00 |
| 2 | GO:0043399: tRNA A64-2'-O-ribosylphosphate transferase activity | 0.00E+00 |
| 3 | GO:0016763: transferase activity, transferring pentosyl groups | 0.00E+00 |
| 4 | GO:0004016: adenylate cyclase activity | 2.25E-04 |
| 5 | GO:1905201: gibberellin transmembrane transporter activity | 2.25E-04 |
| 6 | GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity | 2.25E-04 |
| 7 | GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity | 5.00E-04 |
| 8 | GO:0008805: carbon-monoxide oxygenase activity | 5.00E-04 |
| 9 | GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity | 5.00E-04 |
| 10 | GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding | 5.78E-04 |
| 11 | GO:0003725: double-stranded RNA binding | 6.19E-04 |
| 12 | GO:0016805: dipeptidase activity | 8.13E-04 |
| 13 | GO:0003999: adenine phosphoribosyltransferase activity | 1.16E-03 |
| 14 | GO:0030570: pectate lyase activity | 1.36E-03 |
| 15 | GO:0003727: single-stranded RNA binding | 1.48E-03 |
| 16 | GO:0010011: auxin binding | 1.54E-03 |
| 17 | GO:0004930: G-protein coupled receptor activity | 1.54E-03 |
| 18 | GO:0001085: RNA polymerase II transcription factor binding | 1.87E-03 |
| 19 | GO:0008725: DNA-3-methyladenine glycosylase activity | 1.97E-03 |
| 20 | GO:0019901: protein kinase binding | 2.15E-03 |
| 21 | GO:0009378: four-way junction helicase activity | 2.43E-03 |
| 22 | GO:0043140: ATP-dependent 3'-5' DNA helicase activity | 2.43E-03 |
| 23 | GO:0004124: cysteine synthase activity | 2.91E-03 |
| 24 | GO:0016832: aldehyde-lyase activity | 2.91E-03 |
| 25 | GO:0003700: transcription factor activity, sequence-specific DNA binding | 4.60E-03 |
| 26 | GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 4.98E-03 |
| 27 | GO:0009672: auxin:proton symporter activity | 5.79E-03 |
| 28 | GO:0004713: protein tyrosine kinase activity | 6.45E-03 |
| 29 | GO:0008515: sucrose transmembrane transporter activity | 7.13E-03 |
| 30 | GO:0003691: double-stranded telomeric DNA binding | 7.13E-03 |
| 31 | GO:0015114: phosphate ion transmembrane transporter activity | 8.57E-03 |
| 32 | GO:0010329: auxin efflux transmembrane transporter activity | 8.57E-03 |
| 33 | GO:0003723: RNA binding | 9.36E-03 |
| 34 | GO:0003690: double-stranded DNA binding | 9.83E-03 |
| 35 | GO:0004970: ionotropic glutamate receptor activity | 1.01E-02 |
| 36 | GO:0004190: aspartic-type endopeptidase activity | 1.01E-02 |
| 37 | GO:0051119: sugar transmembrane transporter activity | 1.01E-02 |
| 38 | GO:0005217: intracellular ligand-gated ion channel activity | 1.01E-02 |
| 39 | GO:0003714: transcription corepressor activity | 1.17E-02 |
| 40 | GO:0004871: signal transducer activity | 1.33E-02 |
| 41 | GO:0019843: rRNA binding | 1.70E-02 |
| 42 | GO:0016829: lyase activity | 1.84E-02 |
| 43 | GO:0050662: coenzyme binding | 2.01E-02 |
| 44 | GO:0010181: FMN binding | 2.01E-02 |
| 45 | GO:0005200: structural constituent of cytoskeleton | 2.65E-02 |
| 46 | GO:0008237: metallopeptidase activity | 2.65E-02 |
| 47 | GO:0003677: DNA binding | 2.80E-02 |
| 48 | GO:0051213: dioxygenase activity | 2.88E-02 |
| 49 | GO:0008168: methyltransferase activity | 3.50E-02 |
| 50 | GO:0016788: hydrolase activity, acting on ester bonds | 3.70E-02 |
| 51 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 3.73E-02 |
| 52 | GO:0004222: metalloendopeptidase activity | 3.73E-02 |
| 53 | GO:0003682: chromatin binding | 3.84E-02 |
| 54 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 3.86E-02 |
| 55 | GO:0046983: protein dimerization activity | 3.93E-02 |
| 56 | GO:0003697: single-stranded DNA binding | 4.12E-02 |
| 57 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 4.12E-02 |
| 58 | GO:0052689: carboxylic ester hydrolase activity | 4.95E-02 |