GO Enrichment Analysis of Co-expressed Genes with
AT3G48040
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009583: detection of light stimulus | 0.00E+00 |
| 2 | GO:0071000: response to magnetism | 0.00E+00 |
| 3 | GO:0071311: cellular response to acetate | 0.00E+00 |
| 4 | GO:0070979: protein K11-linked ubiquitination | 0.00E+00 |
| 5 | GO:0071260: cellular response to mechanical stimulus | 0.00E+00 |
| 6 | GO:0061157: mRNA destabilization | 0.00E+00 |
| 7 | GO:0009638: phototropism | 2.74E-05 |
| 8 | GO:0072387: flavin adenine dinucleotide metabolic process | 4.04E-05 |
| 9 | GO:0051247: positive regulation of protein metabolic process | 4.04E-05 |
| 10 | GO:2000905: negative regulation of starch metabolic process | 4.04E-05 |
| 11 | GO:0009740: gibberellic acid mediated signaling pathway | 9.74E-05 |
| 12 | GO:1901529: positive regulation of anion channel activity | 1.00E-04 |
| 13 | GO:0010115: regulation of abscisic acid biosynthetic process | 1.00E-04 |
| 14 | GO:0010617: circadian regulation of calcium ion oscillation | 1.00E-04 |
| 15 | GO:0099402: plant organ development | 1.00E-04 |
| 16 | GO:0010343: singlet oxygen-mediated programmed cell death | 1.00E-04 |
| 17 | GO:1902448: positive regulation of shade avoidance | 1.73E-04 |
| 18 | GO:1901672: positive regulation of systemic acquired resistance | 1.73E-04 |
| 19 | GO:0048586: regulation of long-day photoperiodism, flowering | 1.73E-04 |
| 20 | GO:0071230: cellular response to amino acid stimulus | 1.73E-04 |
| 21 | GO:0031145: anaphase-promoting complex-dependent catabolic process | 1.73E-04 |
| 22 | GO:0010087: phloem or xylem histogenesis | 1.79E-04 |
| 23 | GO:1901332: negative regulation of lateral root development | 2.55E-04 |
| 24 | GO:0009067: aspartate family amino acid biosynthetic process | 2.55E-04 |
| 25 | GO:0030071: regulation of mitotic metaphase/anaphase transition | 2.55E-04 |
| 26 | GO:2000306: positive regulation of photomorphogenesis | 3.43E-04 |
| 27 | GO:1902347: response to strigolactone | 3.43E-04 |
| 28 | GO:0010029: regulation of seed germination | 3.73E-04 |
| 29 | GO:0032876: negative regulation of DNA endoreduplication | 4.37E-04 |
| 30 | GO:0010117: photoprotection | 4.37E-04 |
| 31 | GO:0046283: anthocyanin-containing compound metabolic process | 4.37E-04 |
| 32 | GO:1901371: regulation of leaf morphogenesis | 5.37E-04 |
| 33 | GO:0060918: auxin transport | 5.37E-04 |
| 34 | GO:0006596: polyamine biosynthetic process | 5.37E-04 |
| 35 | GO:0006561: proline biosynthetic process | 5.37E-04 |
| 36 | GO:0048759: xylem vessel member cell differentiation | 5.37E-04 |
| 37 | GO:0009959: negative gravitropism | 5.37E-04 |
| 38 | GO:0010244: response to low fluence blue light stimulus by blue low-fluence system | 6.40E-04 |
| 39 | GO:0009088: threonine biosynthetic process | 6.40E-04 |
| 40 | GO:0010310: regulation of hydrogen peroxide metabolic process | 6.40E-04 |
| 41 | GO:0051510: regulation of unidimensional cell growth | 7.49E-04 |
| 42 | GO:0010161: red light signaling pathway | 7.49E-04 |
| 43 | GO:0032875: regulation of DNA endoreduplication | 8.61E-04 |
| 44 | GO:0010100: negative regulation of photomorphogenesis | 9.77E-04 |
| 45 | GO:0010099: regulation of photomorphogenesis | 9.77E-04 |
| 46 | GO:0006783: heme biosynthetic process | 1.10E-03 |
| 47 | GO:1900426: positive regulation of defense response to bacterium | 1.22E-03 |
| 48 | GO:0009299: mRNA transcription | 1.35E-03 |
| 49 | GO:0009688: abscisic acid biosynthetic process | 1.35E-03 |
| 50 | GO:0006816: calcium ion transport | 1.49E-03 |
| 51 | GO:0009089: lysine biosynthetic process via diaminopimelate | 1.49E-03 |
| 52 | GO:0009750: response to fructose | 1.49E-03 |
| 53 | GO:0009785: blue light signaling pathway | 1.77E-03 |
| 54 | GO:0010075: regulation of meristem growth | 1.77E-03 |
| 55 | GO:0009725: response to hormone | 1.77E-03 |
| 56 | GO:0009416: response to light stimulus | 1.77E-03 |
| 57 | GO:0040008: regulation of growth | 2.22E-03 |
| 58 | GO:0007623: circadian rhythm | 2.32E-03 |
| 59 | GO:0010187: negative regulation of seed germination | 2.39E-03 |
| 60 | GO:2000377: regulation of reactive oxygen species metabolic process | 2.39E-03 |
| 61 | GO:0005992: trehalose biosynthetic process | 2.39E-03 |
| 62 | GO:0006874: cellular calcium ion homeostasis | 2.55E-03 |
| 63 | GO:0010468: regulation of gene expression | 2.76E-03 |
| 64 | GO:0035428: hexose transmembrane transport | 2.89E-03 |
| 65 | GO:0009686: gibberellin biosynthetic process | 3.06E-03 |
| 66 | GO:0019722: calcium-mediated signaling | 3.24E-03 |
| 67 | GO:0006355: regulation of transcription, DNA-templated | 3.40E-03 |
| 68 | GO:0070417: cellular response to cold | 3.42E-03 |
| 69 | GO:0009826: unidimensional cell growth | 3.44E-03 |
| 70 | GO:0034220: ion transmembrane transport | 3.61E-03 |
| 71 | GO:0010118: stomatal movement | 3.61E-03 |
| 72 | GO:0042254: ribosome biogenesis | 3.64E-03 |
| 73 | GO:0010182: sugar mediated signaling pathway | 3.80E-03 |
| 74 | GO:0046323: glucose import | 3.80E-03 |
| 75 | GO:0042752: regulation of circadian rhythm | 3.99E-03 |
| 76 | GO:0009646: response to absence of light | 3.99E-03 |
| 77 | GO:0009414: response to water deprivation | 4.17E-03 |
| 78 | GO:0046777: protein autophosphorylation | 4.72E-03 |
| 79 | GO:0071281: cellular response to iron ion | 4.79E-03 |
| 80 | GO:0015995: chlorophyll biosynthetic process | 6.31E-03 |
| 81 | GO:0018298: protein-chromophore linkage | 6.77E-03 |
| 82 | GO:0000160: phosphorelay signal transduction system | 7.01E-03 |
| 83 | GO:0010218: response to far red light | 7.25E-03 |
| 84 | GO:0009637: response to blue light | 7.99E-03 |
| 85 | GO:0009853: photorespiration | 7.99E-03 |
| 86 | GO:0009640: photomorphogenesis | 9.53E-03 |
| 87 | GO:0008283: cell proliferation | 9.53E-03 |
| 88 | GO:0010114: response to red light | 9.53E-03 |
| 89 | GO:0009926: auxin polar transport | 9.53E-03 |
| 90 | GO:0051707: response to other organism | 9.53E-03 |
| 91 | GO:0009644: response to high light intensity | 1.01E-02 |
| 92 | GO:0009735: response to cytokinin | 1.06E-02 |
| 93 | GO:0042538: hyperosmotic salinity response | 1.12E-02 |
| 94 | GO:0009585: red, far-red light phototransduction | 1.18E-02 |
| 95 | GO:0009736: cytokinin-activated signaling pathway | 1.18E-02 |
| 96 | GO:0009742: brassinosteroid mediated signaling pathway | 1.57E-02 |
| 97 | GO:0006351: transcription, DNA-templated | 2.19E-02 |
| 98 | GO:0010228: vegetative to reproductive phase transition of meristem | 2.30E-02 |
| 99 | GO:0030154: cell differentiation | 2.56E-02 |
| 100 | GO:0009723: response to ethylene | 3.37E-02 |
| 101 | GO:0048366: leaf development | 3.41E-02 |
| 102 | GO:0006412: translation | 3.46E-02 |
| 103 | GO:0015979: photosynthesis | 3.89E-02 |
| 104 | GO:0045454: cell redox homeostasis | 4.02E-02 |
| 105 | GO:0032259: methylation | 4.53E-02 |
| 106 | GO:0007275: multicellular organism development | 4.60E-02 |
| 107 | GO:0009751: response to salicylic acid | 4.62E-02 |
| 108 | GO:0009408: response to heat | 4.67E-02 |
| 109 | GO:0055114: oxidation-reduction process | 4.75E-02 |
| 110 | GO:0009737: response to abscisic acid | 4.97E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010301: xanthoxin dehydrogenase activity | 0.00E+00 |
| 2 | GO:0010487: thermospermine synthase activity | 0.00E+00 |
| 3 | GO:0015276: ligand-gated ion channel activity | 0.00E+00 |
| 4 | GO:0008066: glutamate receptor activity | 4.04E-05 |
| 5 | GO:0010313: phytochrome binding | 4.04E-05 |
| 6 | GO:0016768: spermine synthase activity | 4.04E-05 |
| 7 | GO:0043425: bHLH transcription factor binding | 1.00E-04 |
| 8 | GO:0017172: cysteine dioxygenase activity | 2.55E-04 |
| 9 | GO:0009882: blue light photoreceptor activity | 2.55E-04 |
| 10 | GO:0004072: aspartate kinase activity | 2.55E-04 |
| 11 | GO:0051537: 2 iron, 2 sulfur cluster binding | 7.93E-04 |
| 12 | GO:0003700: transcription factor activity, sequence-specific DNA binding | 1.02E-03 |
| 13 | GO:0071949: FAD binding | 1.10E-03 |
| 14 | GO:0004805: trehalose-phosphatase activity | 1.35E-03 |
| 15 | GO:0008794: arsenate reductase (glutaredoxin) activity | 1.49E-03 |
| 16 | GO:0004022: alcohol dehydrogenase (NAD) activity | 1.77E-03 |
| 17 | GO:0005262: calcium channel activity | 1.77E-03 |
| 18 | GO:0005217: intracellular ligand-gated ion channel activity | 2.07E-03 |
| 19 | GO:0004970: ionotropic glutamate receptor activity | 2.07E-03 |
| 20 | GO:0042802: identical protein binding | 2.94E-03 |
| 21 | GO:0003727: single-stranded RNA binding | 3.24E-03 |
| 22 | GO:0001085: RNA polymerase II transcription factor binding | 3.80E-03 |
| 23 | GO:0005355: glucose transmembrane transporter activity | 3.99E-03 |
| 24 | GO:0000156: phosphorelay response regulator activity | 4.79E-03 |
| 25 | GO:0016597: amino acid binding | 5.42E-03 |
| 26 | GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 7.49E-03 |
| 27 | GO:0046872: metal ion binding | 8.93E-03 |
| 28 | GO:0003735: structural constituent of ribosome | 1.03E-02 |
| 29 | GO:0015035: protein disulfide oxidoreductase activity | 1.54E-02 |
| 30 | GO:0005515: protein binding | 1.74E-02 |
| 31 | GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding | 1.94E-02 |
| 32 | GO:0015144: carbohydrate transmembrane transporter activity | 2.01E-02 |
| 33 | GO:0005351: sugar:proton symporter activity | 2.19E-02 |
| 34 | GO:0044212: transcription regulatory region DNA binding | 2.35E-02 |
| 35 | GO:0008168: methyltransferase activity | 2.95E-02 |
| 36 | GO:0046982: protein heterodimerization activity | 2.99E-02 |
| 37 | GO:0016491: oxidoreductase activity | 3.09E-02 |
| 38 | GO:0046983: protein dimerization activity | 3.13E-02 |
| 39 | GO:0003682: chromatin binding | 3.16E-02 |
| 40 | GO:0008270: zinc ion binding | 3.48E-02 |
| 41 | GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting | 4.02E-02 |
| 42 | GO:0042803: protein homodimerization activity | 4.16E-02 |
| 43 | GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding | 4.34E-02 |
| 44 | GO:0009055: electron carrier activity | 4.90E-02 |
| 45 | GO:0004519: endonuclease activity | 4.95E-02 |