Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G47810

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0071435: potassium ion export0.00E+00
2GO:0006511: ubiquitin-dependent protein catabolic process1.73E-08
3GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly6.24E-05
4GO:0019430: removal of superoxide radicals1.85E-04
5GO:0006680: glucosylceramide catabolic process1.86E-04
6GO:0031338: regulation of vesicle fusion1.86E-04
7GO:0006474: N-terminal protein amino acid acetylation1.86E-04
8GO:0006144: purine nucleobase metabolic process1.86E-04
9GO:0071280: cellular response to copper ion1.86E-04
10GO:0035266: meristem growth1.86E-04
11GO:0007292: female gamete generation1.86E-04
12GO:0019628: urate catabolic process1.86E-04
13GO:0042964: thioredoxin reduction1.86E-04
14GO:1902000: homogentisate catabolic process4.19E-04
15GO:0018345: protein palmitoylation4.19E-04
16GO:0048209: regulation of vesicle targeting, to, from or within Golgi4.19E-04
17GO:0043132: NAD transport4.19E-04
18GO:0051788: response to misfolded protein4.19E-04
19GO:0071457: cellular response to ozone4.19E-04
20GO:0010039: response to iron ion6.03E-04
21GO:0007031: peroxisome organization6.03E-04
22GO:0044375: regulation of peroxisome size6.84E-04
23GO:0090630: activation of GTPase activity6.84E-04
24GO:0018342: protein prenylation6.84E-04
25GO:0009072: aromatic amino acid family metabolic process6.84E-04
26GO:0060968: regulation of gene silencing6.84E-04
27GO:0046686: response to cadmium ion9.22E-04
28GO:0030433: ubiquitin-dependent ERAD pathway9.73E-04
29GO:0071484: cellular response to light intensity9.77E-04
30GO:0071329: cellular response to sucrose stimulus9.77E-04
31GO:0015858: nucleoside transport9.77E-04
32GO:0048577: negative regulation of short-day photoperiodism, flowering9.77E-04
33GO:0051603: proteolysis involved in cellular protein catabolic process1.04E-03
34GO:0080037: negative regulation of cytokinin-activated signaling pathway1.29E-03
35GO:1903830: magnesium ion transmembrane transport1.29E-03
36GO:2000762: regulation of phenylpropanoid metabolic process1.65E-03
37GO:0097428: protein maturation by iron-sulfur cluster transfer1.65E-03
38GO:0032957: inositol trisphosphate metabolic process1.65E-03
39GO:0071493: cellular response to UV-B1.65E-03
40GO:0006891: intra-Golgi vesicle-mediated transport1.77E-03
41GO:0045454: cell redox homeostasis1.81E-03
42GO:0003006: developmental process involved in reproduction2.03E-03
43GO:0006121: mitochondrial electron transport, succinate to ubiquinone2.03E-03
44GO:0048827: phyllome development2.03E-03
45GO:0010264: myo-inositol hexakisphosphate biosynthetic process2.03E-03
46GO:0048232: male gamete generation2.03E-03
47GO:0043248: proteasome assembly2.03E-03
48GO:0042176: regulation of protein catabolic process2.03E-03
49GO:0006914: autophagy2.14E-03
50GO:0009554: megasporogenesis2.43E-03
51GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response2.43E-03
52GO:0034389: lipid particle organization2.43E-03
53GO:0006120: mitochondrial electron transport, NADH to ubiquinone2.43E-03
54GO:0015693: magnesium ion transport2.87E-03
55GO:0080027: response to herbivore2.87E-03
56GO:0015937: coenzyme A biosynthetic process2.87E-03
57GO:0006950: response to stress2.99E-03
58GO:0010078: maintenance of root meristem identity3.32E-03
59GO:0006102: isocitrate metabolic process3.32E-03
60GO:0030162: regulation of proteolysis3.32E-03
61GO:0006499: N-terminal protein myristoylation3.64E-03
62GO:0009407: toxin catabolic process3.64E-03
63GO:0007186: G-protein coupled receptor signaling pathway3.80E-03
64GO:0009657: plastid organization3.80E-03
65GO:0046685: response to arsenic-containing substance4.30E-03
66GO:0034599: cellular response to oxidative stress4.37E-03
67GO:0006099: tricarboxylic acid cycle4.37E-03
68GO:0008202: steroid metabolic process4.82E-03
69GO:0048829: root cap development5.36E-03
70GO:0010015: root morphogenesis5.92E-03
71GO:0072593: reactive oxygen species metabolic process5.92E-03
72GO:0043085: positive regulation of catalytic activity5.92E-03
73GO:0055046: microgametogenesis7.11E-03
74GO:0010102: lateral root morphogenesis7.11E-03
75GO:0006807: nitrogen compound metabolic process7.11E-03
76GO:0010540: basipetal auxin transport7.73E-03
77GO:0009266: response to temperature stimulus7.73E-03
78GO:0009933: meristem structural organization7.73E-03
79GO:0090351: seedling development8.37E-03
80GO:0070588: calcium ion transmembrane transport8.37E-03
81GO:0046688: response to copper ion8.37E-03
82GO:0048316: seed development8.87E-03
83GO:0000027: ribosomal large subunit assembly9.71E-03
84GO:0009624: response to nematode1.03E-02
85GO:0006874: cellular calcium ion homeostasis1.04E-02
86GO:0016998: cell wall macromolecule catabolic process1.11E-02
87GO:0071456: cellular response to hypoxia1.19E-02
88GO:0010227: floral organ abscission1.26E-02
89GO:0006012: galactose metabolic process1.26E-02
90GO:0009058: biosynthetic process1.37E-02
91GO:0016117: carotenoid biosynthetic process1.42E-02
92GO:0010118: stomatal movement1.50E-02
93GO:0006662: glycerol ether metabolic process1.58E-02
94GO:0071472: cellular response to salt stress1.58E-02
95GO:0055114: oxidation-reduction process1.62E-02
96GO:0006413: translational initiation1.67E-02
97GO:0055072: iron ion homeostasis1.75E-02
98GO:0006979: response to oxidative stress1.75E-02
99GO:0010193: response to ozone1.83E-02
100GO:0032502: developmental process1.92E-02
101GO:0030163: protein catabolic process2.01E-02
102GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process2.01E-02
103GO:0006464: cellular protein modification process2.10E-02
104GO:0009615: response to virus2.38E-02
105GO:0009416: response to light stimulus2.40E-02
106GO:0015031: protein transport2.47E-02
107GO:0009627: systemic acquired resistance2.58E-02
108GO:0006906: vesicle fusion2.58E-02
109GO:0006888: ER to Golgi vesicle-mediated transport2.67E-02
110GO:0016049: cell growth2.78E-02
111GO:0009817: defense response to fungus, incompatible interaction2.88E-02
112GO:0010311: lateral root formation2.98E-02
113GO:0006811: ion transport3.08E-02
114GO:0009910: negative regulation of flower development3.19E-02
115GO:0048527: lateral root development3.19E-02
116GO:0009723: response to ethylene3.22E-02
117GO:0055085: transmembrane transport3.23E-02
118GO:0016567: protein ubiquitination3.29E-02
119GO:0009853: photorespiration3.40E-02
120GO:0035195: gene silencing by miRNA3.40E-02
121GO:0045087: innate immune response3.40E-02
122GO:0006839: mitochondrial transport3.74E-02
123GO:0030001: metal ion transport3.74E-02
124GO:0009651: response to salt stress3.86E-02
125GO:0006886: intracellular protein transport4.24E-02
126GO:0009644: response to high light intensity4.31E-02
127GO:0009636: response to toxic substance4.43E-02
128GO:0009965: leaf morphogenesis4.43E-02
129GO:0006855: drug transmembrane transport4.55E-02
130GO:0000165: MAPK cascade4.67E-02
131GO:0031347: regulation of defense response4.67E-02
132GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process4.67E-02
133GO:0009664: plant-type cell wall organization4.79E-02
134GO:0009846: pollen germination4.79E-02
135GO:0042538: hyperosmotic salinity response4.79E-02
RankGO TermAdjusted P value
1GO:0044610: FMN transmembrane transporter activity0.00E+00
2GO:0016034: maleylacetoacetate isomerase activity0.00E+00
3GO:0004846: urate oxidase activity0.00E+00
4GO:0004298: threonine-type endopeptidase activity2.19E-08
5GO:0036402: proteasome-activating ATPase activity6.24E-05
6GO:0004348: glucosylceramidase activity1.86E-04
7GO:0004633: phosphopantothenoylcysteine decarboxylase activity1.86E-04
8GO:0015230: FAD transmembrane transporter activity1.86E-04
9GO:0019786: Atg8-specific protease activity1.86E-04
10GO:0048037: cofactor binding1.86E-04
11GO:0008559: xenobiotic-transporting ATPase activity3.66E-04
12GO:0051980: iron-nicotianamine transmembrane transporter activity4.19E-04
13GO:0008517: folic acid transporter activity4.19E-04
14GO:0004776: succinate-CoA ligase (GDP-forming) activity4.19E-04
15GO:0004596: peptide alpha-N-acetyltransferase activity4.19E-04
16GO:0015228: coenzyme A transmembrane transporter activity4.19E-04
17GO:0051724: NAD transporter activity4.19E-04
18GO:0004775: succinate-CoA ligase (ADP-forming) activity4.19E-04
19GO:0019779: Atg8 activating enzyme activity4.19E-04
20GO:1990585: hydroxyproline O-arabinosyltransferase activity4.19E-04
21GO:0017025: TBP-class protein binding6.03E-04
22GO:0047325: inositol tetrakisphosphate 1-kinase activity6.84E-04
23GO:0052726: inositol-1,3,4-trisphosphate 5-kinase activity6.84E-04
24GO:0052725: inositol-1,3,4-trisphosphate 6-kinase activity9.77E-04
25GO:0004449: isocitrate dehydrogenase (NAD+) activity9.77E-04
26GO:0019776: Atg8 ligase activity1.29E-03
27GO:0016004: phospholipase activator activity1.29E-03
28GO:0009916: alternative oxidase activity1.29E-03
29GO:0004301: epoxide hydrolase activity1.29E-03
30GO:0008233: peptidase activity1.34E-03
31GO:0004791: thioredoxin-disulfide reductase activity1.54E-03
32GO:0080122: AMP transmembrane transporter activity1.65E-03
33GO:0017137: Rab GTPase binding1.65E-03
34GO:0000104: succinate dehydrogenase activity1.65E-03
35GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity2.03E-03
36GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity2.03E-03
37GO:0004784: superoxide dismutase activity2.03E-03
38GO:0005347: ATP transmembrane transporter activity2.43E-03
39GO:0008113: peptide-methionine (S)-S-oxide reductase activity2.43E-03
40GO:0015217: ADP transmembrane transporter activity2.43E-03
41GO:0004714: transmembrane receptor protein tyrosine kinase activity3.32E-03
42GO:0004034: aldose 1-epimerase activity3.32E-03
43GO:0005544: calcium-dependent phospholipid binding3.32E-03
44GO:0008142: oxysterol binding3.80E-03
45GO:0045309: protein phosphorylated amino acid binding4.82E-03
46GO:0004364: glutathione transferase activity5.18E-03
47GO:0030234: enzyme regulator activity5.36E-03
48GO:0008047: enzyme activator activity5.36E-03
49GO:0004601: peroxidase activity5.38E-03
50GO:0019904: protein domain specific binding5.92E-03
51GO:0008327: methyl-CpG binding5.92E-03
52GO:0016787: hydrolase activity5.92E-03
53GO:0008794: arsenate reductase (glutaredoxin) activity5.92E-03
54GO:0015198: oligopeptide transporter activity6.51E-03
55GO:0015095: magnesium ion transmembrane transporter activity7.11E-03
56GO:0004175: endopeptidase activity7.73E-03
57GO:0004970: ionotropic glutamate receptor activity8.37E-03
58GO:0005217: intracellular ligand-gated ion channel activity8.37E-03
59GO:0008061: chitin binding8.37E-03
60GO:0005507: copper ion binding1.02E-02
61GO:0015035: protein disulfide oxidoreductase activity1.07E-02
62GO:0004540: ribonuclease activity1.11E-02
63GO:0047134: protein-disulfide reductase activity1.42E-02
64GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding1.48E-02
65GO:0003713: transcription coactivator activity1.58E-02
66GO:0005199: structural constituent of cell wall1.58E-02
67GO:0046873: metal ion transmembrane transporter activity1.58E-02
68GO:0008080: N-acetyltransferase activity1.58E-02
69GO:0001085: RNA polymerase II transcription factor binding1.58E-02
70GO:0016853: isomerase activity1.66E-02
71GO:0010181: FMN binding1.66E-02
72GO:0048038: quinone binding1.83E-02
73GO:0008137: NADH dehydrogenase (ubiquinone) activity1.83E-02
74GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor2.01E-02
75GO:0016887: ATPase activity2.02E-02
76GO:0003743: translation initiation factor activity2.10E-02
77GO:0042626: ATPase activity, coupled to transmembrane movement of substances2.28E-02
78GO:0004806: triglyceride lipase activity2.67E-02
79GO:0000287: magnesium ion binding2.73E-02
80GO:0005096: GTPase activator activity2.98E-02
81GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding3.19E-02
82GO:0000149: SNARE binding3.63E-02
83GO:0051539: 4 iron, 4 sulfur cluster binding3.74E-02
84GO:0005484: SNAP receptor activity4.08E-02
85GO:0005198: structural molecule activity4.43E-02
86GO:0051287: NAD binding4.67E-02
87GO:0005524: ATP binding4.78E-02
<
Gene type



Gene DE type