co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G47650

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0030388: fructose 1,6-bisphosphate metabolic process	0.00E+00
2	GO:0002184: cytoplasmic translational termination	0.00E+00
3	GO:0005996: monosaccharide metabolic process	0.00E+00
4	GO:0070272: proton-transporting ATP synthase complex biogenesis	0.00E+00
5	GO:0016553: base conversion or substitution editing	0.00E+00
6	GO:0015979: photosynthesis	5.44E-11
7	GO:0015995: chlorophyll biosynthetic process	4.51E-10
8	GO:0006000: fructose metabolic process	9.39E-09
9	GO:0006094: gluconeogenesis	3.36E-07
10	GO:0009735: response to cytokinin	5.38E-07
11	GO:0032544: plastid translation	3.84E-06
12	GO:0006002: fructose 6-phosphate metabolic process	3.84E-06
13	GO:0009773: photosynthetic electron transport in photosystem I	1.26E-05
14	GO:0005986: sucrose biosynthetic process	2.00E-05
15	GO:0009658: chloroplast organization	2.05E-05
16	GO:0010207: photosystem II assembly	2.45E-05
17	GO:0019253: reductive pentose-phosphate cycle	2.45E-05
18	GO:0010021: amylopectin biosynthetic process	2.77E-05
19	GO:0010600: regulation of auxin biosynthetic process	2.77E-05
20	GO:0010244: response to low fluence blue light stimulus by blue low-fluence system	9.18E-05
21	GO:0019252: starch biosynthetic process	1.50E-04
22	GO:0009704: de-etiolation	1.56E-04
23	GO:0010928: regulation of auxin mediated signaling pathway	1.56E-04
24	GO:0043489: RNA stabilization	1.93E-04
25	GO:1904966: positive regulation of vitamin E biosynthetic process	1.93E-04
26	GO:1904964: positive regulation of phytol biosynthetic process	1.93E-04
27	GO:0065002: intracellular protein transmembrane transport	1.93E-04
28	GO:0034337: RNA folding	1.93E-04
29	GO:0043953: protein transport by the Tat complex	1.93E-04
30	GO:0071277: cellular response to calcium ion	1.93E-04
31	GO:0006412: translation	2.21E-04
32	GO:0006783: heme biosynthetic process	2.36E-04
33	GO:0018119: peptidyl-cysteine S-nitrosylation	3.85E-04
34	GO:0018298: protein-chromophore linkage	3.92E-04
35	GO:0055114: oxidation-reduction process	3.95E-04
36	GO:1902326: positive regulation of chlorophyll biosynthetic process	4.33E-04
37	GO:0034599: cellular response to oxidative stress	5.64E-04
38	GO:0006518: peptide metabolic process	7.06E-04
39	GO:0009768: photosynthesis, light harvesting in photosystem I	8.55E-04
40	GO:1901332: negative regulation of lateral root development	1.01E-03
41	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	1.01E-03
42	GO:0006020: inositol metabolic process	1.01E-03
43	GO:0009152: purine ribonucleotide biosynthetic process	1.01E-03
44	GO:0046653: tetrahydrofolate metabolic process	1.01E-03
45	GO:0009052: pentose-phosphate shunt, non-oxidative branch	1.01E-03
46	GO:0033014: tetrapyrrole biosynthetic process	1.01E-03
47	GO:0010731: protein glutathionylation	1.01E-03
48	GO:0019748: secondary metabolic process	1.02E-03
49	GO:0006021: inositol biosynthetic process	1.34E-03
50	GO:0006109: regulation of carbohydrate metabolic process	1.34E-03
51	GO:0045727: positive regulation of translation	1.34E-03
52	GO:0006536: glutamate metabolic process	1.34E-03
53	GO:0006546: glycine catabolic process	1.34E-03
54	GO:0042631: cellular response to water deprivation	1.40E-03
55	GO:0006662: glycerol ether metabolic process	1.51E-03
56	GO:0000304: response to singlet oxygen	1.70E-03
57	GO:0006656: phosphatidylcholine biosynthetic process	1.70E-03
58	GO:0043097: pyrimidine nucleoside salvage	1.70E-03
59	GO:0042549: photosystem II stabilization	2.10E-03
60	GO:0006206: pyrimidine nucleobase metabolic process	2.10E-03
61	GO:0046855: inositol phosphate dephosphorylation	2.10E-03
62	GO:0032259: methylation	2.52E-03
63	GO:0009854: oxidative photosynthetic carbon pathway	2.52E-03
64	GO:1901259: chloroplast rRNA processing	2.52E-03
65	GO:1900057: positive regulation of leaf senescence	2.96E-03
66	GO:0050790: regulation of catalytic activity	2.96E-03
67	GO:0010161: red light signaling pathway	2.96E-03
68	GO:0009772: photosynthetic electron transport in photosystem II	2.96E-03
69	GO:0010196: nonphotochemical quenching	2.96E-03
70	GO:0048564: photosystem I assembly	3.43E-03
71	GO:0005978: glycogen biosynthetic process	3.43E-03
72	GO:0009642: response to light intensity	3.43E-03
73	GO:0010218: response to far red light	3.83E-03
74	GO:0006526: arginine biosynthetic process	3.93E-03
75	GO:0071482: cellular response to light stimulus	3.93E-03
76	GO:0009637: response to blue light	4.40E-03
77	GO:0009853: photorespiration	4.40E-03
78	GO:0090333: regulation of stomatal closure	4.44E-03
79	GO:0006754: ATP biosynthetic process	4.44E-03
80	GO:0005982: starch metabolic process	4.99E-03
81	GO:0006779: porphyrin-containing compound biosynthetic process	4.99E-03
82	GO:0006535: cysteine biosynthetic process from serine	5.55E-03
83	GO:0006782: protoporphyrinogen IX biosynthetic process	5.55E-03
84	GO:0010114: response to red light	5.66E-03
85	GO:0042254: ribosome biogenesis	5.87E-03
86	GO:0000272: polysaccharide catabolic process	6.13E-03
87	GO:0009750: response to fructose	6.13E-03
88	GO:0019684: photosynthesis, light reaction	6.13E-03
89	GO:0043085: positive regulation of catalytic activity	6.13E-03
90	GO:0006790: sulfur compound metabolic process	6.73E-03
91	GO:0005983: starch catabolic process	6.73E-03
92	GO:0018107: peptidyl-threonine phosphorylation	7.36E-03
93	GO:0009767: photosynthetic electron transport chain	7.36E-03
94	GO:0006807: nitrogen compound metabolic process	7.36E-03
95	GO:0006364: rRNA processing	7.63E-03
96	GO:0009585: red, far-red light phototransduction	7.63E-03
97	GO:0046854: phosphatidylinositol phosphorylation	8.67E-03
98	GO:0005985: sucrose metabolic process	8.67E-03
99	GO:0019762: glucosinolate catabolic process	9.35E-03
100	GO:0019344: cysteine biosynthetic process	1.01E-02
101	GO:0000027: ribosomal large subunit assembly	1.01E-02
102	GO:0061077: chaperone-mediated protein folding	1.15E-02
103	GO:0031408: oxylipin biosynthetic process	1.15E-02
104	GO:0010017: red or far-red light signaling pathway	1.23E-02
105	GO:0035428: hexose transmembrane transport	1.23E-02
106	GO:0016226: iron-sulfur cluster assembly	1.23E-02
107	GO:0009693: ethylene biosynthetic process	1.31E-02
108	GO:0009058: biosynthetic process	1.44E-02
109	GO:0046323: glucose import	1.63E-02
110	GO:0006520: cellular amino acid metabolic process	1.63E-02
111	GO:0015986: ATP synthesis coupled proton transport	1.72E-02
112	GO:0006633: fatty acid biosynthetic process	1.72E-02
113	GO:0042742: defense response to bacterium	1.86E-02
114	GO:0000302: response to reactive oxygen species	1.90E-02
115	GO:0009567: double fertilization forming a zygote and endosperm	2.18E-02
116	GO:0010027: thylakoid membrane organization	2.47E-02
117	GO:0042128: nitrate assimilation	2.67E-02
118	GO:0006950: response to stress	2.77E-02
119	GO:0016311: dephosphorylation	2.88E-02
120	GO:0009409: response to cold	2.92E-02
121	GO:0009817: defense response to fungus, incompatible interaction	2.98E-02
122	GO:0010311: lateral root formation	3.09E-02
123	GO:0006810: transport	3.29E-02
124	GO:0007568: aging	3.31E-02
125	GO:0009631: cold acclimation	3.31E-02
126	GO:0005975: carbohydrate metabolic process	3.45E-02
127	GO:0016051: carbohydrate biosynthetic process	3.53E-02
128	GO:0045087: innate immune response	3.53E-02
129	GO:0030001: metal ion transport	3.87E-02
130	GO:0044550: secondary metabolite biosynthetic process	3.93E-02
131	GO:0045454: cell redox homeostasis	4.32E-02
132	GO:0009636: response to toxic substance	4.59E-02

Rank	GO Term	Adjusted P value
1	GO:0050278: sedoheptulose-bisphosphatase activity	0.00E+00
2	GO:0008974: phosphoribulokinase activity	0.00E+00
3	GO:0004314: [acyl-carrier-protein] S-malonyltransferase activity	0.00E+00
4	GO:0008465: glycerate dehydrogenase activity	0.00E+00
5	GO:0046408: chlorophyll synthetase activity	0.00E+00
6	GO:0008942: nitrite reductase [NAD(P)H] activity	0.00E+00
7	GO:0102193: protein-ribulosamine 3-kinase activity	0.00E+00
8	GO:0004318: enoyl-[acyl-carrier-protein] reductase (NADH) activity	0.00E+00
9	GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity	0.00E+00
10	GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity	0.00E+00
11	GO:0016631: enoyl-[acyl-carrier-protein] reductase activity	0.00E+00
12	GO:0090711: FMN hydrolase activity	0.00E+00
13	GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity	0.00E+00
14	GO:0052667: phosphomethylethanolamine N-methyltransferase activity	0.00E+00
15	GO:0019843: rRNA binding	1.43E-10
16	GO:0016851: magnesium chelatase activity	1.50E-05
17	GO:0008266: poly(U) RNA binding	2.45E-05
18	GO:0003735: structural constituent of ribosome	1.39E-04
19	GO:0008886: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity	1.93E-04
20	GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity	1.93E-04
21	GO:0016776: phosphotransferase activity, phosphate group as acceptor	1.93E-04
22	GO:0004325: ferrochelatase activity	1.93E-04
23	GO:0004853: uroporphyrinogen decarboxylase activity	1.93E-04
24	GO:0016168: chlorophyll binding	2.97E-04
25	GO:0000234: phosphoethanolamine N-methyltransferase activity	4.33E-04
26	GO:0050017: L-3-cyanoalanine synthase activity	4.33E-04
27	GO:0010297: heteropolysaccharide binding	4.33E-04
28	GO:0009977: proton motive force dependent protein transmembrane transporter activity	4.33E-04
29	GO:0004047: aminomethyltransferase activity	4.33E-04
30	GO:0052832: inositol monophosphate 3-phosphatase activity	4.33E-04
31	GO:0033201: alpha-1,4-glucan synthase activity	4.33E-04
32	GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity	4.33E-04
33	GO:0008934: inositol monophosphate 1-phosphatase activity	4.33E-04
34	GO:0052833: inositol monophosphate 4-phosphatase activity	4.33E-04
35	GO:0018708: thiol S-methyltransferase activity	4.33E-04
36	GO:0003844: 1,4-alpha-glucan branching enzyme activity	4.33E-04
37	GO:0016630: protochlorophyllide reductase activity	4.33E-04
38	GO:0031409: pigment binding	7.02E-04
39	GO:0004751: ribose-5-phosphate isomerase activity	7.06E-04
40	GO:0016742: hydroxymethyl-, formyl- and related transferase activity	7.06E-04
41	GO:0008864: formyltetrahydrofolate deformylase activity	7.06E-04
42	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	7.06E-04
43	GO:0043169: cation binding	7.06E-04
44	GO:0004373: glycogen (starch) synthase activity	7.06E-04
45	GO:0016491: oxidoreductase activity	7.14E-04
46	GO:0005528: FK506 binding	7.77E-04
47	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	8.88E-04
48	GO:0043023: ribosomal large subunit binding	1.01E-03
49	GO:0004351: glutamate decarboxylase activity	1.01E-03
50	GO:0047134: protein-disulfide reductase activity	1.30E-03
51	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	1.34E-03
52	GO:0043495: protein anchor	1.34E-03
53	GO:0009011: starch synthase activity	1.34E-03
54	GO:0004791: thioredoxin-disulfide reductase activity	1.62E-03
55	GO:0003959: NADPH dehydrogenase activity	1.70E-03
56	GO:0004332: fructose-bisphosphate aldolase activity	2.10E-03
57	GO:0004130: cytochrome-c peroxidase activity	2.10E-03
58	GO:0042578: phosphoric ester hydrolase activity	2.10E-03
59	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	2.11E-03
60	GO:0004124: cysteine synthase activity	2.52E-03
61	GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	2.52E-03
62	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	2.52E-03
63	GO:0004849: uridine kinase activity	2.52E-03
64	GO:0019899: enzyme binding	2.96E-03
65	GO:0004033: aldo-keto reductase (NADP) activity	3.43E-03
66	GO:0004222: metalloendopeptidase activity	3.83E-03
67	GO:0003746: translation elongation factor activity	4.40E-03
68	GO:0071949: FAD binding	4.44E-03
69	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	4.99E-03
70	GO:0008168: methyltransferase activity	5.46E-03
71	GO:0030234: enzyme regulator activity	5.55E-03
72	GO:0008047: enzyme activator activity	5.55E-03
73	GO:0004185: serine-type carboxypeptidase activity	5.66E-03
74	GO:0051537: 2 iron, 2 sulfur cluster binding	6.12E-03
75	GO:0051287: NAD binding	6.85E-03
76	GO:0019888: protein phosphatase regulator activity	7.36E-03
77	GO:0004565: beta-galactosidase activity	7.36E-03
78	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	9.32E-03
79	GO:0051536: iron-sulfur cluster binding	1.01E-02
80	GO:0004857: enzyme inhibitor activity	1.01E-02
81	GO:0005507: copper ion binding	1.10E-02
82	GO:0015035: protein disulfide oxidoreductase activity	1.12E-02
83	GO:0022891: substrate-specific transmembrane transporter activity	1.31E-02
84	GO:0009055: electron carrier activity	1.35E-02
85	GO:0030170: pyridoxal phosphate binding	1.52E-02
86	GO:0046933: proton-transporting ATP synthase activity, rotational mechanism	1.63E-02
87	GO:0050662: coenzyme binding	1.72E-02
88	GO:0005355: glucose transmembrane transporter activity	1.72E-02
89	GO:0048038: quinone binding	1.90E-02
90	GO:0016787: hydrolase activity	1.99E-02
91	GO:0008483: transaminase activity	2.27E-02
92	GO:0042802: identical protein binding	2.40E-02
93	GO:0004721: phosphoprotein phosphatase activity	2.77E-02
94	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	2.88E-02
95	GO:0004601: peroxidase activity	2.92E-02
96	GO:0003729: mRNA binding	3.35E-02
97	GO:0004364: glutathione transferase activity	4.11E-02
98	GO:0043621: protein self-association	4.47E-02
99	GO:0005198: structural molecule activity	4.59E-02