GO Enrichment Analysis of Co-expressed Genes with
AT3G47560
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0033494: ferulate metabolic process | 0.00E+00 |
| 2 | GO:2000121: regulation of removal of superoxide radicals | 0.00E+00 |
| 3 | GO:2001294: malonyl-CoA catabolic process | 0.00E+00 |
| 4 | GO:0045176: apical protein localization | 0.00E+00 |
| 5 | GO:0007155: cell adhesion | 3.56E-08 |
| 6 | GO:0006168: adenine salvage | 2.08E-05 |
| 7 | GO:0006166: purine ribonucleoside salvage | 2.08E-05 |
| 8 | GO:0044209: AMP salvage | 6.05E-05 |
| 9 | GO:0045038: protein import into chloroplast thylakoid membrane | 6.05E-05 |
| 10 | GO:0010076: maintenance of floral meristem identity | 1.23E-04 |
| 11 | GO:1902334: fructose export from vacuole to cytoplasm | 2.32E-04 |
| 12 | GO:0010362: negative regulation of anion channel activity by blue light | 2.32E-04 |
| 13 | GO:0031426: polycistronic mRNA processing | 2.32E-04 |
| 14 | GO:0048438: floral whorl development | 2.32E-04 |
| 15 | GO:1902458: positive regulation of stomatal opening | 2.32E-04 |
| 16 | GO:0009641: shade avoidance | 4.30E-04 |
| 17 | GO:0009750: response to fructose | 4.97E-04 |
| 18 | GO:0010115: regulation of abscisic acid biosynthetic process | 5.15E-04 |
| 19 | GO:1900871: chloroplast mRNA modification | 5.15E-04 |
| 20 | GO:0010155: regulation of proton transport | 5.15E-04 |
| 21 | GO:1903426: regulation of reactive oxygen species biosynthetic process | 5.15E-04 |
| 22 | GO:0010143: cutin biosynthetic process | 7.26E-04 |
| 23 | GO:0009405: pathogenesis | 8.37E-04 |
| 24 | GO:0006753: nucleoside phosphate metabolic process | 8.37E-04 |
| 25 | GO:0042753: positive regulation of circadian rhythm | 9.01E-04 |
| 26 | GO:0010239: chloroplast mRNA processing | 1.19E-03 |
| 27 | GO:0006164: purine nucleotide biosynthetic process | 1.19E-03 |
| 28 | GO:0009963: positive regulation of flavonoid biosynthetic process | 1.19E-03 |
| 29 | GO:1990019: protein storage vacuole organization | 1.19E-03 |
| 30 | GO:0009647: skotomorphogenesis | 1.19E-03 |
| 31 | GO:0048442: sepal development | 1.59E-03 |
| 32 | GO:0009649: entrainment of circadian clock | 1.59E-03 |
| 33 | GO:0008295: spermidine biosynthetic process | 1.59E-03 |
| 34 | GO:0032366: intracellular sterol transport | 1.59E-03 |
| 35 | GO:0006021: inositol biosynthetic process | 1.59E-03 |
| 36 | GO:0010182: sugar mediated signaling pathway | 1.95E-03 |
| 37 | GO:0006665: sphingolipid metabolic process | 2.03E-03 |
| 38 | GO:0010158: abaxial cell fate specification | 2.03E-03 |
| 39 | GO:0034052: positive regulation of plant-type hypersensitive response | 2.03E-03 |
| 40 | GO:0046283: anthocyanin-containing compound metabolic process | 2.03E-03 |
| 41 | GO:0009904: chloroplast accumulation movement | 2.03E-03 |
| 42 | GO:1902183: regulation of shoot apical meristem development | 2.03E-03 |
| 43 | GO:0048825: cotyledon development | 2.24E-03 |
| 44 | GO:0009416: response to light stimulus | 2.45E-03 |
| 45 | GO:0000741: karyogamy | 2.50E-03 |
| 46 | GO:0046855: inositol phosphate dephosphorylation | 2.50E-03 |
| 47 | GO:0006561: proline biosynthetic process | 2.50E-03 |
| 48 | GO:0048827: phyllome development | 2.50E-03 |
| 49 | GO:0009648: photoperiodism | 3.00E-03 |
| 50 | GO:0042372: phylloquinone biosynthetic process | 3.00E-03 |
| 51 | GO:0048280: vesicle fusion with Golgi apparatus | 3.00E-03 |
| 52 | GO:0009903: chloroplast avoidance movement | 3.00E-03 |
| 53 | GO:0010196: nonphotochemical quenching | 3.54E-03 |
| 54 | GO:0015937: coenzyme A biosynthetic process | 3.54E-03 |
| 55 | GO:0048573: photoperiodism, flowering | 4.07E-03 |
| 56 | GO:0043068: positive regulation of programmed cell death | 4.10E-03 |
| 57 | GO:0010078: maintenance of root meristem identity | 4.10E-03 |
| 58 | GO:2000070: regulation of response to water deprivation | 4.10E-03 |
| 59 | GO:0015996: chlorophyll catabolic process | 4.70E-03 |
| 60 | GO:0007186: G-protein coupled receptor signaling pathway | 4.70E-03 |
| 61 | GO:0006997: nucleus organization | 4.70E-03 |
| 62 | GO:0043562: cellular response to nitrogen levels | 4.70E-03 |
| 63 | GO:0006811: ion transport | 4.97E-03 |
| 64 | GO:0010119: regulation of stomatal movement | 5.21E-03 |
| 65 | GO:0048507: meristem development | 5.32E-03 |
| 66 | GO:2000024: regulation of leaf development | 5.32E-03 |
| 67 | GO:0006189: 'de novo' IMP biosynthetic process | 5.32E-03 |
| 68 | GO:0009638: phototropism | 5.97E-03 |
| 69 | GO:0010018: far-red light signaling pathway | 5.97E-03 |
| 70 | GO:1900865: chloroplast RNA modification | 5.97E-03 |
| 71 | GO:0048354: mucilage biosynthetic process involved in seed coat development | 5.97E-03 |
| 72 | GO:0010192: mucilage biosynthetic process | 6.65E-03 |
| 73 | GO:0006896: Golgi to vacuole transport | 6.65E-03 |
| 74 | GO:0006995: cellular response to nitrogen starvation | 6.65E-03 |
| 75 | GO:0048441: petal development | 6.65E-03 |
| 76 | GO:0009688: abscisic acid biosynthetic process | 6.65E-03 |
| 77 | GO:0009684: indoleacetic acid biosynthetic process | 7.35E-03 |
| 78 | GO:0006790: sulfur compound metabolic process | 8.08E-03 |
| 79 | GO:0016024: CDP-diacylglycerol biosynthetic process | 8.08E-03 |
| 80 | GO:0045037: protein import into chloroplast stroma | 8.08E-03 |
| 81 | GO:0010582: floral meristem determinacy | 8.08E-03 |
| 82 | GO:0010588: cotyledon vascular tissue pattern formation | 8.84E-03 |
| 83 | GO:0009785: blue light signaling pathway | 8.84E-03 |
| 84 | GO:0010229: inflorescence development | 8.84E-03 |
| 85 | GO:0009767: photosynthetic electron transport chain | 8.84E-03 |
| 86 | GO:0000165: MAPK cascade | 8.91E-03 |
| 87 | GO:0006302: double-strand break repair | 9.62E-03 |
| 88 | GO:0048467: gynoecium development | 9.62E-03 |
| 89 | GO:0048440: carpel development | 9.62E-03 |
| 90 | GO:0006541: glutamine metabolic process | 9.62E-03 |
| 91 | GO:0010207: photosystem II assembly | 9.62E-03 |
| 92 | GO:0010223: secondary shoot formation | 9.62E-03 |
| 93 | GO:0009887: animal organ morphogenesis | 9.62E-03 |
| 94 | GO:0010540: basipetal auxin transport | 9.62E-03 |
| 95 | GO:0009266: response to temperature stimulus | 9.62E-03 |
| 96 | GO:0009585: red, far-red light phototransduction | 9.93E-03 |
| 97 | GO:0009825: multidimensional cell growth | 1.04E-02 |
| 98 | GO:0019853: L-ascorbic acid biosynthetic process | 1.04E-02 |
| 99 | GO:0046854: phosphatidylinositol phosphorylation | 1.04E-02 |
| 100 | GO:0000162: tryptophan biosynthetic process | 1.13E-02 |
| 101 | GO:0000027: ribosomal large subunit assembly | 1.21E-02 |
| 102 | GO:0007010: cytoskeleton organization | 1.21E-02 |
| 103 | GO:0009944: polarity specification of adaxial/abaxial axis | 1.21E-02 |
| 104 | GO:0048367: shoot system development | 1.21E-02 |
| 105 | GO:0007017: microtubule-based process | 1.30E-02 |
| 106 | GO:0019915: lipid storage | 1.39E-02 |
| 107 | GO:0051321: meiotic cell cycle | 1.39E-02 |
| 108 | GO:0051260: protein homooligomerization | 1.39E-02 |
| 109 | GO:0048511: rhythmic process | 1.39E-02 |
| 110 | GO:0035428: hexose transmembrane transport | 1.48E-02 |
| 111 | GO:0009814: defense response, incompatible interaction | 1.48E-02 |
| 112 | GO:0009294: DNA mediated transformation | 1.57E-02 |
| 113 | GO:0071369: cellular response to ethylene stimulus | 1.57E-02 |
| 114 | GO:0048443: stamen development | 1.67E-02 |
| 115 | GO:0019722: calcium-mediated signaling | 1.67E-02 |
| 116 | GO:0006629: lipid metabolic process | 1.73E-02 |
| 117 | GO:0042147: retrograde transport, endosome to Golgi | 1.77E-02 |
| 118 | GO:0080022: primary root development | 1.87E-02 |
| 119 | GO:0010087: phloem or xylem histogenesis | 1.87E-02 |
| 120 | GO:0010154: fruit development | 1.97E-02 |
| 121 | GO:0009958: positive gravitropism | 1.97E-02 |
| 122 | GO:0010197: polar nucleus fusion | 1.97E-02 |
| 123 | GO:0046323: glucose import | 1.97E-02 |
| 124 | GO:0007018: microtubule-based movement | 2.07E-02 |
| 125 | GO:0006623: protein targeting to vacuole | 2.18E-02 |
| 126 | GO:0009791: post-embryonic development | 2.18E-02 |
| 127 | GO:0009749: response to glucose | 2.18E-02 |
| 128 | GO:0009851: auxin biosynthetic process | 2.18E-02 |
| 129 | GO:0048510: regulation of timing of transition from vegetative to reproductive phase | 2.29E-02 |
| 130 | GO:0071554: cell wall organization or biogenesis | 2.29E-02 |
| 131 | GO:0006891: intra-Golgi vesicle-mediated transport | 2.29E-02 |
| 132 | GO:0007264: small GTPase mediated signal transduction | 2.40E-02 |
| 133 | GO:0010583: response to cyclopentenone | 2.40E-02 |
| 134 | GO:0007623: circadian rhythm | 2.46E-02 |
| 135 | GO:0045490: pectin catabolic process | 2.46E-02 |
| 136 | GO:0016125: sterol metabolic process | 2.62E-02 |
| 137 | GO:0009639: response to red or far red light | 2.62E-02 |
| 138 | GO:0006464: cellular protein modification process | 2.62E-02 |
| 139 | GO:0007267: cell-cell signaling | 2.74E-02 |
| 140 | GO:0009617: response to bacterium | 2.93E-02 |
| 141 | GO:0009911: positive regulation of flower development | 2.98E-02 |
| 142 | GO:0010027: thylakoid membrane organization | 2.98E-02 |
| 143 | GO:0006888: ER to Golgi vesicle-mediated transport | 3.34E-02 |
| 144 | GO:0016311: dephosphorylation | 3.47E-02 |
| 145 | GO:0045944: positive regulation of transcription from RNA polymerase II promoter | 3.52E-02 |
| 146 | GO:0018298: protein-chromophore linkage | 3.59E-02 |
| 147 | GO:0000160: phosphorelay signal transduction system | 3.72E-02 |
| 148 | GO:0009910: negative regulation of flower development | 3.98E-02 |
| 149 | GO:0048527: lateral root development | 3.98E-02 |
| 150 | GO:0007568: aging | 3.98E-02 |
| 151 | GO:0045893: positive regulation of transcription, DNA-templated | 4.19E-02 |
| 152 | GO:0009637: response to blue light | 4.25E-02 |
| 153 | GO:0006631: fatty acid metabolic process | 4.81E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010301: xanthoxin dehydrogenase activity | 0.00E+00 |
| 2 | GO:0004639: phosphoribosylaminoimidazolesuccinocarboxamide synthase activity | 0.00E+00 |
| 3 | GO:0008756: o-succinylbenzoate-CoA ligase activity | 0.00E+00 |
| 4 | GO:1990534: thermospermine oxidase activity | 0.00E+00 |
| 5 | GO:0003999: adenine phosphoribosyltransferase activity | 2.08E-05 |
| 6 | GO:0000293: ferric-chelate reductase activity | 8.88E-05 |
| 7 | GO:0047259: glucomannan 4-beta-mannosyltransferase activity | 2.32E-04 |
| 8 | GO:0010945: CoA pyrophosphatase activity | 2.32E-04 |
| 9 | GO:0004328: formamidase activity | 2.32E-04 |
| 10 | GO:0010347: L-galactose-1-phosphate phosphatase activity | 2.32E-04 |
| 11 | GO:0004766: spermidine synthase activity | 5.15E-04 |
| 12 | GO:0052832: inositol monophosphate 3-phosphatase activity | 5.15E-04 |
| 13 | GO:0008934: inositol monophosphate 1-phosphatase activity | 5.15E-04 |
| 14 | GO:0052833: inositol monophosphate 4-phosphatase activity | 5.15E-04 |
| 15 | GO:0015929: hexosaminidase activity | 5.15E-04 |
| 16 | GO:0004563: beta-N-acetylhexosaminidase activity | 5.15E-04 |
| 17 | GO:0080097: L-tryptophan:pyruvate aminotransferase activity | 5.15E-04 |
| 18 | GO:0005353: fructose transmembrane transporter activity | 5.15E-04 |
| 19 | GO:0017118: lipoyltransferase activity | 5.15E-04 |
| 20 | GO:0050362: L-tryptophan:2-oxoglutarate aminotransferase activity | 5.15E-04 |
| 21 | GO:0050734: hydroxycinnamoyltransferase activity | 8.37E-04 |
| 22 | GO:0003913: DNA photolyase activity | 8.37E-04 |
| 23 | GO:0090729: toxin activity | 8.37E-04 |
| 24 | GO:0000900: translation repressor activity, nucleic acid binding | 8.37E-04 |
| 25 | GO:0004049: anthranilate synthase activity | 8.37E-04 |
| 26 | GO:0048027: mRNA 5'-UTR binding | 1.19E-03 |
| 27 | GO:0008893: guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity | 1.19E-03 |
| 28 | GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | 1.19E-03 |
| 29 | GO:0009882: blue light photoreceptor activity | 1.19E-03 |
| 30 | GO:0030570: pectate lyase activity | 1.42E-03 |
| 31 | GO:0080032: methyl jasmonate esterase activity | 1.59E-03 |
| 32 | GO:0016846: carbon-sulfur lyase activity | 2.03E-03 |
| 33 | GO:0005355: glucose transmembrane transporter activity | 2.09E-03 |
| 34 | GO:0016746: transferase activity, transferring acyl groups | 2.38E-03 |
| 35 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 2.50E-03 |
| 36 | GO:0000210: NAD+ diphosphatase activity | 2.50E-03 |
| 37 | GO:0016208: AMP binding | 2.50E-03 |
| 38 | GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity | 2.50E-03 |
| 39 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 3.00E-03 |
| 40 | GO:0051753: mannan synthase activity | 3.00E-03 |
| 41 | GO:0005338: nucleotide-sugar transmembrane transporter activity | 3.54E-03 |
| 42 | GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding | 3.60E-03 |
| 43 | GO:0047196: long-chain-alcohol O-fatty-acyltransferase activity | 4.70E-03 |
| 44 | GO:0103095: wax ester synthase activity | 4.70E-03 |
| 45 | GO:0008017: microtubule binding | 4.86E-03 |
| 46 | GO:0042802: identical protein binding | 6.23E-03 |
| 47 | GO:0047372: acylglycerol lipase activity | 7.35E-03 |
| 48 | GO:0008515: sucrose transmembrane transporter activity | 7.35E-03 |
| 49 | GO:0008081: phosphoric diester hydrolase activity | 8.84E-03 |
| 50 | GO:0004022: alcohol dehydrogenase (NAD) activity | 8.84E-03 |
| 51 | GO:0000155: phosphorelay sensor kinase activity | 8.84E-03 |
| 52 | GO:0008131: primary amine oxidase activity | 9.62E-03 |
| 53 | GO:0008146: sulfotransferase activity | 1.04E-02 |
| 54 | GO:0051119: sugar transmembrane transporter activity | 1.04E-02 |
| 55 | GO:0003777: microtubule motor activity | 1.10E-02 |
| 56 | GO:0008408: 3'-5' exonuclease activity | 1.39E-02 |
| 57 | GO:0004871: signal transducer activity | 1.40E-02 |
| 58 | GO:0004722: protein serine/threonine phosphatase activity | 1.49E-02 |
| 59 | GO:0016829: lyase activity | 1.92E-02 |
| 60 | GO:0001085: RNA polymerase II transcription factor binding | 1.97E-02 |
| 61 | GO:0010181: FMN binding | 2.07E-02 |
| 62 | GO:0016791: phosphatase activity | 2.62E-02 |
| 63 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 2.74E-02 |
| 64 | GO:0016413: O-acetyltransferase activity | 2.86E-02 |
| 65 | GO:0016787: hydrolase activity | 3.09E-02 |
| 66 | GO:0030247: polysaccharide binding | 3.34E-02 |
| 67 | GO:0004721: phosphoprotein phosphatase activity | 3.34E-02 |
| 68 | GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 3.98E-02 |
| 69 | GO:0030145: manganese ion binding | 3.98E-02 |
| 70 | GO:0016491: oxidoreductase activity | 4.11E-02 |
| 71 | GO:0003993: acid phosphatase activity | 4.39E-02 |
| 72 | GO:0000149: SNARE binding | 4.53E-02 |
| 73 | GO:0004672: protein kinase activity | 4.80E-02 |