Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G46930

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0010647: positive regulation of cell communication0.00E+00
2GO:1902001: fatty acid transmembrane transport0.00E+00
3GO:0090359: negative regulation of abscisic acid biosynthetic process0.00E+00
4GO:0033198: response to ATP0.00E+00
5GO:0002764: immune response-regulating signaling pathway0.00E+00
6GO:0046109: uridine biosynthetic process0.00E+00
7GO:0032499: detection of peptidoglycan0.00E+00
8GO:0006182: cGMP biosynthetic process0.00E+00
9GO:0002752: cell surface pattern recognition receptor signaling pathway0.00E+00
10GO:0006952: defense response2.39E-04
11GO:0046470: phosphatidylcholine metabolic process2.99E-04
12GO:0042350: GDP-L-fucose biosynthetic process3.47E-04
13GO:0015969: guanosine tetraphosphate metabolic process3.47E-04
14GO:0080173: male-female gamete recognition during double fertilization3.47E-04
15GO:0099132: ATP hydrolysis coupled cation transmembrane transport3.47E-04
16GO:0033306: phytol metabolic process3.47E-04
17GO:0006643: membrane lipid metabolic process3.47E-04
18GO:0010045: response to nickel cation3.47E-04
19GO:0032491: detection of molecule of fungal origin3.47E-04
20GO:0016559: peroxisome fission3.76E-04
21GO:0010112: regulation of systemic acquired resistance5.52E-04
22GO:0080181: lateral root branching7.56E-04
23GO:0055088: lipid homeostasis7.56E-04
24GO:0019521: D-gluconate metabolic process7.56E-04
25GO:0015908: fatty acid transport7.56E-04
26GO:0031349: positive regulation of defense response7.56E-04
27GO:0051258: protein polymerization7.56E-04
28GO:0060919: auxin influx7.56E-04
29GO:0010115: regulation of abscisic acid biosynthetic process7.56E-04
30GO:0000719: photoreactive repair7.56E-04
31GO:0010042: response to manganese ion7.56E-04
32GO:0010271: regulation of chlorophyll catabolic process7.56E-04
33GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine7.56E-04
34GO:0071668: plant-type cell wall assembly7.56E-04
35GO:0006468: protein phosphorylation8.06E-04
36GO:0000266: mitochondrial fission1.00E-03
37GO:0015695: organic cation transport1.22E-03
38GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway1.22E-03
39GO:0002230: positive regulation of defense response to virus by host1.22E-03
40GO:1900055: regulation of leaf senescence1.22E-03
41GO:0080163: regulation of protein serine/threonine phosphatase activity1.22E-03
42GO:0006048: UDP-N-acetylglucosamine biosynthetic process1.22E-03
43GO:0016045: detection of bacterium1.22E-03
44GO:0010359: regulation of anion channel activity1.22E-03
45GO:0042351: 'de novo' GDP-L-fucose biosynthetic process1.22E-03
46GO:0044375: regulation of peroxisome size1.22E-03
47GO:0010053: root epidermal cell differentiation1.43E-03
48GO:0007165: signal transduction1.69E-03
49GO:0072334: UDP-galactose transmembrane transport1.76E-03
50GO:0030100: regulation of endocytosis1.76E-03
51GO:0009052: pentose-phosphate shunt, non-oxidative branch1.76E-03
52GO:0009226: nucleotide-sugar biosynthetic process1.76E-03
53GO:0015696: ammonium transport1.76E-03
54GO:0071323: cellular response to chitin1.76E-03
55GO:1902290: positive regulation of defense response to oomycetes1.76E-03
56GO:2000377: regulation of reactive oxygen species metabolic process1.76E-03
57GO:0046713: borate transport1.76E-03
58GO:0006886: intracellular protein transport1.86E-03
59GO:0006085: acetyl-CoA biosynthetic process2.37E-03
60GO:0045088: regulation of innate immune response2.37E-03
61GO:0072488: ammonium transmembrane transport2.37E-03
62GO:0071219: cellular response to molecule of bacterial origin2.37E-03
63GO:0007166: cell surface receptor signaling pathway2.48E-03
64GO:0009617: response to bacterium2.65E-03
65GO:0016094: polyprenol biosynthetic process3.03E-03
66GO:0006465: signal peptide processing3.03E-03
67GO:0009229: thiamine diphosphate biosynthetic process3.03E-03
68GO:0042391: regulation of membrane potential3.24E-03
69GO:0010315: auxin efflux3.74E-03
70GO:0009228: thiamine biosynthetic process3.74E-03
71GO:0033365: protein localization to organelle3.74E-03
72GO:0009749: response to glucose4.02E-03
73GO:0009620: response to fungus4.34E-03
74GO:2000067: regulation of root morphogenesis4.50E-03
75GO:0080036: regulation of cytokinin-activated signaling pathway4.50E-03
76GO:0031930: mitochondria-nucleus signaling pathway4.50E-03
77GO:0048509: regulation of meristem development4.50E-03
78GO:0010555: response to mannitol4.50E-03
79GO:0015937: coenzyme A biosynthetic process5.32E-03
80GO:1900057: positive regulation of leaf senescence5.32E-03
81GO:0010038: response to metal ion5.32E-03
82GO:0010044: response to aluminum ion5.32E-03
83GO:0016192: vesicle-mediated transport5.91E-03
84GO:0009787: regulation of abscisic acid-activated signaling pathway6.17E-03
85GO:0009819: drought recovery6.17E-03
86GO:1900150: regulation of defense response to fungus6.17E-03
87GO:0009850: auxin metabolic process6.17E-03
88GO:0010208: pollen wall assembly7.08E-03
89GO:0007186: G-protein coupled receptor signaling pathway7.08E-03
90GO:0010497: plasmodesmata-mediated intercellular transport7.08E-03
91GO:0006997: nucleus organization7.08E-03
92GO:0010204: defense response signaling pathway, resistance gene-independent7.08E-03
93GO:0042742: defense response to bacterium7.95E-03
94GO:0006098: pentose-phosphate shunt8.04E-03
95GO:0019432: triglyceride biosynthetic process8.04E-03
96GO:0046916: cellular transition metal ion homeostasis8.04E-03
97GO:0009060: aerobic respiration8.04E-03
98GO:0010380: regulation of chlorophyll biosynthetic process9.03E-03
99GO:1900426: positive regulation of defense response to bacterium9.03E-03
100GO:0007568: aging9.43E-03
101GO:0010150: leaf senescence9.78E-03
102GO:0007064: mitotic sister chromatid cohesion1.01E-02
103GO:0006032: chitin catabolic process1.01E-02
104GO:0019684: photosynthesis, light reaction1.12E-02
105GO:0043085: positive regulation of catalytic activity1.12E-02
106GO:0009750: response to fructose1.12E-02
107GO:0030148: sphingolipid biosynthetic process1.12E-02
108GO:0006470: protein dephosphorylation1.16E-02
109GO:0006790: sulfur compound metabolic process1.23E-02
110GO:0045037: protein import into chloroplast stroma1.23E-02
111GO:0015031: protein transport1.27E-02
112GO:0018107: peptidyl-threonine phosphorylation1.34E-02
113GO:0034605: cellular response to heat1.46E-02
114GO:0007034: vacuolar transport1.46E-02
115GO:0010540: basipetal auxin transport1.46E-02
116GO:0007031: peroxisome organization1.59E-02
117GO:0010167: response to nitrate1.59E-02
118GO:0070588: calcium ion transmembrane transport1.59E-02
119GO:0046854: phosphatidylinositol phosphorylation1.59E-02
120GO:0034976: response to endoplasmic reticulum stress1.71E-02
121GO:0009736: cytokinin-activated signaling pathway1.81E-02
122GO:0009863: salicylic acid mediated signaling pathway1.85E-02
123GO:0080147: root hair cell development1.85E-02
124GO:0051302: regulation of cell division1.98E-02
125GO:0016998: cell wall macromolecule catabolic process2.12E-02
126GO:0030245: cellulose catabolic process2.26E-02
127GO:0007005: mitochondrion organization2.26E-02
128GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway2.33E-02
129GO:0010200: response to chitin2.33E-02
130GO:0009411: response to UV2.40E-02
131GO:0035556: intracellular signal transduction2.54E-02
132GO:0010584: pollen exine formation2.55E-02
133GO:0006284: base-excision repair2.55E-02
134GO:0050832: defense response to fungus2.63E-02
135GO:0070417: cellular response to cold2.70E-02
136GO:0016567: protein ubiquitination2.76E-02
137GO:0071472: cellular response to salt stress3.01E-02
138GO:0006662: glycerol ether metabolic process3.01E-02
139GO:0048544: recognition of pollen3.17E-02
140GO:0006814: sodium ion transport3.17E-02
141GO:0002229: defense response to oomycetes3.50E-02
142GO:0016042: lipid catabolic process3.51E-02
143GO:0007264: small GTPase mediated signal transduction3.67E-02
144GO:0009630: gravitropism3.67E-02
145GO:0030163: protein catabolic process3.84E-02
146GO:0010286: heat acclimation4.19E-02
147GO:0001666: response to hypoxia4.55E-02
148GO:0009816: defense response to bacterium, incompatible interaction4.73E-02
149GO:0006974: cellular response to DNA damage stimulus4.91E-02
RankGO TermAdjusted P value
1GO:0052821: DNA-7-methyladenine glycosylase activity0.00E+00
2GO:0003905: alkylbase DNA N-glycosylase activity0.00E+00
3GO:0004610: phosphoacetylglucosamine mutase activity0.00E+00
4GO:0005212: structural constituent of eye lens0.00E+00
5GO:0052822: DNA-3-methylguanine glycosylase activity0.00E+00
6GO:0043916: DNA-7-methylguanine glycosylase activity0.00E+00
7GO:0050334: thiaminase activity0.00E+00
8GO:0016312: inositol bisphosphate phosphatase activity0.00E+00
9GO:2001080: chitosan binding0.00E+00
10GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor0.00E+00
11GO:0008320: protein transmembrane transporter activity7.56E-06
12GO:0019199: transmembrane receptor protein kinase activity7.53E-05
13GO:0004674: protein serine/threonine kinase activity1.47E-04
14GO:0050577: GDP-L-fucose synthase activity3.47E-04
15GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity3.47E-04
16GO:0019707: protein-cysteine S-acyltransferase activity3.47E-04
17GO:0015245: fatty acid transporter activity3.47E-04
18GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity3.47E-04
19GO:0004649: poly(ADP-ribose) glycohydrolase activity3.47E-04
20GO:0004675: transmembrane receptor protein serine/threonine kinase activity3.54E-04
21GO:0004714: transmembrane receptor protein tyrosine kinase activity3.76E-04
22GO:0004630: phospholipase D activity4.61E-04
23GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity4.61E-04
24GO:0004594: pantothenate kinase activity7.56E-04
25GO:0045140: inositol phosphoceramide synthase activity7.56E-04
26GO:0008728: GTP diphosphokinase activity7.56E-04
27GO:0004713: protein tyrosine kinase activity7.61E-04
28GO:0001664: G-protein coupled receptor binding1.22E-03
29GO:0016174: NAD(P)H oxidase activity1.22E-03
30GO:0031683: G-protein beta/gamma-subunit complex binding1.22E-03
31GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity1.22E-03
32GO:0004751: ribose-5-phosphate isomerase activity1.22E-03
33GO:0004383: guanylate cyclase activity1.22E-03
34GO:0016301: kinase activity1.25E-03
35GO:0030552: cAMP binding1.43E-03
36GO:0030553: cGMP binding1.43E-03
37GO:0010178: IAA-amino acid conjugate hydrolase activity1.76E-03
38GO:0005216: ion channel activity1.94E-03
39GO:0019706: protein-cysteine S-palmitoyltransferase activity2.13E-03
40GO:0010328: auxin influx transmembrane transporter activity2.37E-03
41GO:0008725: DNA-3-methyladenine glycosylase activity3.03E-03
42GO:0005459: UDP-galactose transmembrane transporter activity3.03E-03
43GO:0005546: phosphatidylinositol-4,5-bisphosphate binding3.03E-03
44GO:0002094: polyprenyltransferase activity3.03E-03
45GO:0005496: steroid binding3.03E-03
46GO:0070696: transmembrane receptor protein serine/threonine kinase binding3.03E-03
47GO:0030551: cyclic nucleotide binding3.24E-03
48GO:0005249: voltage-gated potassium channel activity3.24E-03
49GO:0008519: ammonium transmembrane transporter activity3.74E-03
50GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity4.50E-03
51GO:0009927: histidine phosphotransfer kinase activity4.50E-03
52GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity4.50E-03
53GO:0004144: diacylglycerol O-acyltransferase activity4.50E-03
54GO:0004672: protein kinase activity5.95E-03
55GO:0015491: cation:cation antiporter activity6.17E-03
56GO:0008375: acetylglucosaminyltransferase activity6.96E-03
57GO:0008171: O-methyltransferase activity1.01E-02
58GO:0008047: enzyme activator activity1.01E-02
59GO:0004864: protein phosphatase inhibitor activity1.01E-02
60GO:0004568: chitinase activity1.01E-02
61GO:0008559: xenobiotic-transporting ATPase activity1.12E-02
62GO:0015198: oligopeptide transporter activity1.23E-02
63GO:0005524: ATP binding1.26E-02
64GO:0005388: calcium-transporting ATPase activity1.34E-02
65GO:0010329: auxin efflux transmembrane transporter activity1.34E-02
66GO:0008081: phosphoric diester hydrolase activity1.34E-02
67GO:0008061: chitin binding1.59E-02
68GO:0004190: aspartic-type endopeptidase activity1.59E-02
69GO:0043531: ADP binding1.92E-02
70GO:0043424: protein histidine kinase binding1.98E-02
71GO:0031625: ubiquitin protein ligase binding2.00E-02
72GO:0005509: calcium ion binding2.05E-02
73GO:0033612: receptor serine/threonine kinase binding2.12E-02
74GO:0008810: cellulase activity2.40E-02
75GO:0003756: protein disulfide isomerase activity2.55E-02
76GO:0047134: protein-disulfide reductase activity2.70E-02
77GO:0004871: signal transducer activity2.97E-02
78GO:0004722: protein serine/threonine phosphatase activity3.14E-02
79GO:0004791: thioredoxin-disulfide reductase activity3.17E-02
80GO:0016853: isomerase activity3.17E-02
81GO:0050662: coenzyme binding3.17E-02
82GO:0019901: protein kinase binding3.33E-02
83GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor3.84E-02
84GO:0004842: ubiquitin-protein transferase activity4.02E-02
85GO:0008237: metallopeptidase activity4.19E-02
86GO:0005515: protein binding4.24E-02
87GO:0005525: GTP binding4.82E-02
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Gene type



Gene DE type