GO Enrichment Analysis of Co-expressed Genes with
AT3G46690
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0071435: potassium ion export | 0.00E+00 |
| 2 | GO:0001881: receptor recycling | 0.00E+00 |
| 3 | GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly | 4.37E-05 |
| 4 | GO:0019430: removal of superoxide radicals | 1.33E-04 |
| 5 | GO:0007292: female gamete generation | 1.50E-04 |
| 6 | GO:0019628: urate catabolic process | 1.50E-04 |
| 7 | GO:0042964: thioredoxin reduction | 1.50E-04 |
| 8 | GO:0006680: glucosylceramide catabolic process | 1.50E-04 |
| 9 | GO:0031338: regulation of vesicle fusion | 1.50E-04 |
| 10 | GO:0006474: N-terminal protein amino acid acetylation | 1.50E-04 |
| 11 | GO:0006144: purine nucleobase metabolic process | 1.50E-04 |
| 12 | GO:0071280: cellular response to copper ion | 1.50E-04 |
| 13 | GO:0035266: meristem growth | 1.50E-04 |
| 14 | GO:0045454: cell redox homeostasis | 1.97E-04 |
| 15 | GO:0006511: ubiquitin-dependent protein catabolic process | 3.18E-04 |
| 16 | GO:0051788: response to misfolded protein | 3.42E-04 |
| 17 | GO:0071457: cellular response to ozone | 3.42E-04 |
| 18 | GO:1902000: homogentisate catabolic process | 3.42E-04 |
| 19 | GO:0018345: protein palmitoylation | 3.42E-04 |
| 20 | GO:0043132: NAD transport | 3.42E-04 |
| 21 | GO:0007031: peroxisome organization | 4.48E-04 |
| 22 | GO:0010039: response to iron ion | 4.48E-04 |
| 23 | GO:0046686: response to cadmium ion | 4.64E-04 |
| 24 | GO:0009072: aromatic amino acid family metabolic process | 5.61E-04 |
| 25 | GO:0060968: regulation of gene silencing | 5.61E-04 |
| 26 | GO:0008333: endosome to lysosome transport | 5.61E-04 |
| 27 | GO:0044375: regulation of peroxisome size | 5.61E-04 |
| 28 | GO:0090630: activation of GTPase activity | 5.61E-04 |
| 29 | GO:0018342: protein prenylation | 5.61E-04 |
| 30 | GO:0030433: ubiquitin-dependent ERAD pathway | 7.29E-04 |
| 31 | GO:0071329: cellular response to sucrose stimulus | 8.03E-04 |
| 32 | GO:0015858: nucleoside transport | 8.03E-04 |
| 33 | GO:0048577: negative regulation of short-day photoperiodism, flowering | 8.03E-04 |
| 34 | GO:0071484: cellular response to light intensity | 8.03E-04 |
| 35 | GO:1990937: xylan acetylation | 1.06E-03 |
| 36 | GO:0080037: negative regulation of cytokinin-activated signaling pathway | 1.06E-03 |
| 37 | GO:0032957: inositol trisphosphate metabolic process | 1.35E-03 |
| 38 | GO:0071493: cellular response to UV-B | 1.35E-03 |
| 39 | GO:2000762: regulation of phenylpropanoid metabolic process | 1.35E-03 |
| 40 | GO:0097428: protein maturation by iron-sulfur cluster transfer | 1.35E-03 |
| 41 | GO:0048232: male gamete generation | 1.65E-03 |
| 42 | GO:0043248: proteasome assembly | 1.65E-03 |
| 43 | GO:0003006: developmental process involved in reproduction | 1.65E-03 |
| 44 | GO:0006121: mitochondrial electron transport, succinate to ubiquinone | 1.65E-03 |
| 45 | GO:0048827: phyllome development | 1.65E-03 |
| 46 | GO:0010264: myo-inositol hexakisphosphate biosynthetic process | 1.65E-03 |
| 47 | GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response | 1.98E-03 |
| 48 | GO:0034389: lipid particle organization | 1.98E-03 |
| 49 | GO:0006120: mitochondrial electron transport, NADH to ubiquinone | 1.98E-03 |
| 50 | GO:0006694: steroid biosynthetic process | 1.98E-03 |
| 51 | GO:0080027: response to herbivore | 2.33E-03 |
| 52 | GO:0030162: regulation of proteolysis | 2.70E-03 |
| 53 | GO:0006499: N-terminal protein myristoylation | 2.70E-03 |
| 54 | GO:0009407: toxin catabolic process | 2.70E-03 |
| 55 | GO:0010078: maintenance of root meristem identity | 2.70E-03 |
| 56 | GO:0006102: isocitrate metabolic process | 2.70E-03 |
| 57 | GO:0055114: oxidation-reduction process | 2.83E-03 |
| 58 | GO:0007186: G-protein coupled receptor signaling pathway | 3.08E-03 |
| 59 | GO:0009657: plastid organization | 3.08E-03 |
| 60 | GO:0006099: tricarboxylic acid cycle | 3.23E-03 |
| 61 | GO:0034599: cellular response to oxidative stress | 3.23E-03 |
| 62 | GO:0008202: steroid metabolic process | 3.91E-03 |
| 63 | GO:0048829: root cap development | 4.35E-03 |
| 64 | GO:0010015: root morphogenesis | 4.80E-03 |
| 65 | GO:0072593: reactive oxygen species metabolic process | 4.80E-03 |
| 66 | GO:0043085: positive regulation of catalytic activity | 4.80E-03 |
| 67 | GO:0010102: lateral root morphogenesis | 5.75E-03 |
| 68 | GO:0006807: nitrogen compound metabolic process | 5.75E-03 |
| 69 | GO:0009933: meristem structural organization | 6.25E-03 |
| 70 | GO:0007034: vacuolar transport | 6.25E-03 |
| 71 | GO:0010540: basipetal auxin transport | 6.25E-03 |
| 72 | GO:0009266: response to temperature stimulus | 6.25E-03 |
| 73 | GO:0048316: seed development | 6.53E-03 |
| 74 | GO:0046688: response to copper ion | 6.77E-03 |
| 75 | GO:0090351: seedling development | 6.77E-03 |
| 76 | GO:0070588: calcium ion transmembrane transport | 6.77E-03 |
| 77 | GO:0034976: response to endoplasmic reticulum stress | 7.30E-03 |
| 78 | GO:0009624: response to nematode | 7.61E-03 |
| 79 | GO:0000027: ribosomal large subunit assembly | 7.84E-03 |
| 80 | GO:0006874: cellular calcium ion homeostasis | 8.40E-03 |
| 81 | GO:0016998: cell wall macromolecule catabolic process | 8.97E-03 |
| 82 | GO:0071456: cellular response to hypoxia | 9.56E-03 |
| 83 | GO:0009058: biosynthetic process | 1.01E-02 |
| 84 | GO:0010227: floral organ abscission | 1.02E-02 |
| 85 | GO:0042742: defense response to bacterium | 1.09E-02 |
| 86 | GO:0006979: response to oxidative stress | 1.10E-02 |
| 87 | GO:0016117: carotenoid biosynthetic process | 1.14E-02 |
| 88 | GO:0042147: retrograde transport, endosome to Golgi | 1.14E-02 |
| 89 | GO:0010118: stomatal movement | 1.20E-02 |
| 90 | GO:0071472: cellular response to salt stress | 1.27E-02 |
| 91 | GO:0006662: glycerol ether metabolic process | 1.27E-02 |
| 92 | GO:0048868: pollen tube development | 1.27E-02 |
| 93 | GO:0048544: recognition of pollen | 1.34E-02 |
| 94 | GO:0006623: protein targeting to vacuole | 1.41E-02 |
| 95 | GO:0055072: iron ion homeostasis | 1.41E-02 |
| 96 | GO:0010193: response to ozone | 1.47E-02 |
| 97 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 1.48E-02 |
| 98 | GO:0007166: cell surface receptor signaling pathway | 1.51E-02 |
| 99 | GO:0032502: developmental process | 1.55E-02 |
| 100 | GO:0009416: response to light stimulus | 1.63E-02 |
| 101 | GO:0009567: double fertilization forming a zygote and endosperm | 1.69E-02 |
| 102 | GO:0006464: cellular protein modification process | 1.69E-02 |
| 103 | GO:0009615: response to virus | 1.92E-02 |
| 104 | GO:0016567: protein ubiquitination | 1.96E-02 |
| 105 | GO:0009627: systemic acquired resistance | 2.07E-02 |
| 106 | GO:0006950: response to stress | 2.15E-02 |
| 107 | GO:0016049: cell growth | 2.23E-02 |
| 108 | GO:0009817: defense response to fungus, incompatible interaction | 2.31E-02 |
| 109 | GO:0009723: response to ethylene | 2.37E-02 |
| 110 | GO:0010311: lateral root formation | 2.40E-02 |
| 111 | GO:0009834: plant-type secondary cell wall biogenesis | 2.48E-02 |
| 112 | GO:0006811: ion transport | 2.48E-02 |
| 113 | GO:0009910: negative regulation of flower development | 2.56E-02 |
| 114 | GO:0048527: lateral root development | 2.56E-02 |
| 115 | GO:0009853: photorespiration | 2.74E-02 |
| 116 | GO:0035195: gene silencing by miRNA | 2.74E-02 |
| 117 | GO:0045087: innate immune response | 2.74E-02 |
| 118 | GO:0006839: mitochondrial transport | 3.00E-02 |
| 119 | GO:0009644: response to high light intensity | 3.47E-02 |
| 120 | GO:0009636: response to toxic substance | 3.56E-02 |
| 121 | GO:0009965: leaf morphogenesis | 3.56E-02 |
| 122 | GO:0006855: drug transmembrane transport | 3.66E-02 |
| 123 | GO:0009408: response to heat | 3.74E-02 |
| 124 | GO:0031347: regulation of defense response | 3.76E-02 |
| 125 | GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process | 3.76E-02 |
| 126 | GO:0000165: MAPK cascade | 3.76E-02 |
| 127 | GO:0006468: protein phosphorylation | 3.78E-02 |
| 128 | GO:0009846: pollen germination | 3.85E-02 |
| 129 | GO:0009664: plant-type cell wall organization | 3.85E-02 |
| 130 | GO:0051603: proteolysis involved in cellular protein catabolic process | 4.15E-02 |
| 131 | GO:0010224: response to UV-B | 4.15E-02 |
| 132 | GO:0006857: oligopeptide transport | 4.26E-02 |
| 133 | GO:0048367: shoot system development | 4.67E-02 |
| 134 | GO:0009620: response to fungus | 4.88E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004846: urate oxidase activity | 0.00E+00 |
| 2 | GO:0044610: FMN transmembrane transporter activity | 0.00E+00 |
| 3 | GO:0016034: maleylacetoacetate isomerase activity | 0.00E+00 |
| 4 | GO:0036402: proteasome-activating ATPase activity | 4.37E-05 |
| 5 | GO:0048037: cofactor binding | 1.50E-04 |
| 6 | GO:0004348: glucosylceramidase activity | 1.50E-04 |
| 7 | GO:0015230: FAD transmembrane transporter activity | 1.50E-04 |
| 8 | GO:0051724: NAD transporter activity | 3.42E-04 |
| 9 | GO:0004775: succinate-CoA ligase (ADP-forming) activity | 3.42E-04 |
| 10 | GO:0051980: iron-nicotianamine transmembrane transporter activity | 3.42E-04 |
| 11 | GO:0008517: folic acid transporter activity | 3.42E-04 |
| 12 | GO:0004776: succinate-CoA ligase (GDP-forming) activity | 3.42E-04 |
| 13 | GO:0004596: peptide alpha-N-acetyltransferase activity | 3.42E-04 |
| 14 | GO:0015228: coenzyme A transmembrane transporter activity | 3.42E-04 |
| 15 | GO:0017025: TBP-class protein binding | 4.48E-04 |
| 16 | GO:0003854: 3-beta-hydroxy-delta5-steroid dehydrogenase activity | 5.61E-04 |
| 17 | GO:0052726: inositol-1,3,4-trisphosphate 5-kinase activity | 5.61E-04 |
| 18 | GO:0047325: inositol tetrakisphosphate 1-kinase activity | 5.61E-04 |
| 19 | GO:0004449: isocitrate dehydrogenase (NAD+) activity | 8.03E-04 |
| 20 | GO:0052725: inositol-1,3,4-trisphosphate 6-kinase activity | 8.03E-04 |
| 21 | GO:0016004: phospholipase activator activity | 1.06E-03 |
| 22 | GO:0009916: alternative oxidase activity | 1.06E-03 |
| 23 | GO:0004301: epoxide hydrolase activity | 1.06E-03 |
| 24 | GO:0004791: thioredoxin-disulfide reductase activity | 1.15E-03 |
| 25 | GO:0080122: AMP transmembrane transporter activity | 1.35E-03 |
| 26 | GO:0017137: Rab GTPase binding | 1.35E-03 |
| 27 | GO:0000104: succinate dehydrogenase activity | 1.35E-03 |
| 28 | GO:1990538: xylan O-acetyltransferase activity | 1.65E-03 |
| 29 | GO:0004784: superoxide dismutase activity | 1.65E-03 |
| 30 | GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity | 1.65E-03 |
| 31 | GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity | 1.65E-03 |
| 32 | GO:0005347: ATP transmembrane transporter activity | 1.98E-03 |
| 33 | GO:0008113: peptide-methionine (S)-S-oxide reductase activity | 1.98E-03 |
| 34 | GO:0015217: ADP transmembrane transporter activity | 1.98E-03 |
| 35 | GO:0005544: calcium-dependent phospholipid binding | 2.70E-03 |
| 36 | GO:0004714: transmembrane receptor protein tyrosine kinase activity | 2.70E-03 |
| 37 | GO:0008142: oxysterol binding | 3.08E-03 |
| 38 | GO:0004601: peroxidase activity | 3.65E-03 |
| 39 | GO:0004364: glutathione transferase activity | 3.82E-03 |
| 40 | GO:0045309: protein phosphorylated amino acid binding | 3.91E-03 |
| 41 | GO:0008047: enzyme activator activity | 4.35E-03 |
| 42 | GO:0008794: arsenate reductase (glutaredoxin) activity | 4.80E-03 |
| 43 | GO:0019904: protein domain specific binding | 4.80E-03 |
| 44 | GO:0008559: xenobiotic-transporting ATPase activity | 4.80E-03 |
| 45 | GO:0015198: oligopeptide transporter activity | 5.27E-03 |
| 46 | GO:0015095: magnesium ion transmembrane transporter activity | 5.75E-03 |
| 47 | GO:0005507: copper ion binding | 6.39E-03 |
| 48 | GO:0005217: intracellular ligand-gated ion channel activity | 6.77E-03 |
| 49 | GO:0008061: chitin binding | 6.77E-03 |
| 50 | GO:0004970: ionotropic glutamate receptor activity | 6.77E-03 |
| 51 | GO:0015035: protein disulfide oxidoreductase activity | 7.84E-03 |
| 52 | GO:0004540: ribonuclease activity | 8.97E-03 |
| 53 | GO:0004298: threonine-type endopeptidase activity | 8.97E-03 |
| 54 | GO:0005524: ATP binding | 9.06E-03 |
| 55 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 9.80E-03 |
| 56 | GO:0003756: protein disulfide isomerase activity | 1.08E-02 |
| 57 | GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding | 1.09E-02 |
| 58 | GO:0047134: protein-disulfide reductase activity | 1.14E-02 |
| 59 | GO:0008080: N-acetyltransferase activity | 1.27E-02 |
| 60 | GO:0001085: RNA polymerase II transcription factor binding | 1.27E-02 |
| 61 | GO:0003713: transcription coactivator activity | 1.27E-02 |
| 62 | GO:0005199: structural constituent of cell wall | 1.27E-02 |
| 63 | GO:0016853: isomerase activity | 1.34E-02 |
| 64 | GO:0016887: ATPase activity | 1.37E-02 |
| 65 | GO:0048038: quinone binding | 1.47E-02 |
| 66 | GO:0008137: NADH dehydrogenase (ubiquinone) activity | 1.47E-02 |
| 67 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 1.62E-02 |
| 68 | GO:0000287: magnesium ion binding | 2.01E-02 |
| 69 | GO:0004806: triglyceride lipase activity | 2.15E-02 |
| 70 | GO:0030247: polysaccharide binding | 2.15E-02 |
| 71 | GO:0005096: GTPase activator activity | 2.40E-02 |
| 72 | GO:0004497: monooxygenase activity | 2.54E-02 |
| 73 | GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 2.56E-02 |
| 74 | GO:0051539: 4 iron, 4 sulfur cluster binding | 3.00E-02 |
| 75 | GO:0016787: hydrolase activity | 3.38E-02 |
| 76 | GO:0005198: structural molecule activity | 3.56E-02 |
| 77 | GO:0051287: NAD binding | 3.76E-02 |
| 78 | GO:0031625: ubiquitin protein ligase binding | 4.36E-02 |
| 79 | GO:0004674: protein serine/threonine kinase activity | 4.36E-02 |
| 80 | GO:0003824: catalytic activity | 4.41E-02 |
| 81 | GO:0016874: ligase activity | 4.99E-02 |