GO Enrichment Analysis of Co-expressed Genes with
AT3G46490
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1903224: regulation of endodermal cell differentiation | 0.00E+00 |
| 2 | GO:0031222: arabinan catabolic process | 0.00E+00 |
| 3 | GO:0045184: establishment of protein localization | 0.00E+00 |
| 4 | GO:0046620: regulation of organ growth | 1.22E-06 |
| 5 | GO:0035987: endodermal cell differentiation | 1.42E-04 |
| 6 | GO:0006436: tryptophanyl-tRNA aminoacylation | 1.42E-04 |
| 7 | GO:0000066: mitochondrial ornithine transport | 1.42E-04 |
| 8 | GO:0042659: regulation of cell fate specification | 1.42E-04 |
| 9 | GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process | 1.42E-04 |
| 10 | GO:0090558: plant epidermis development | 1.42E-04 |
| 11 | GO:0000373: Group II intron splicing | 1.50E-04 |
| 12 | GO:0018026: peptidyl-lysine monomethylation | 3.25E-04 |
| 13 | GO:0071497: cellular response to freezing | 3.25E-04 |
| 14 | GO:2000123: positive regulation of stomatal complex development | 3.25E-04 |
| 15 | GO:0009926: auxin polar transport | 4.24E-04 |
| 16 | GO:0009734: auxin-activated signaling pathway | 4.78E-04 |
| 17 | GO:0001578: microtubule bundle formation | 5.33E-04 |
| 18 | GO:0090708: specification of plant organ axis polarity | 5.33E-04 |
| 19 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 7.35E-04 |
| 20 | GO:0046739: transport of virus in multicellular host | 7.63E-04 |
| 21 | GO:0010306: rhamnogalacturonan II biosynthetic process | 7.63E-04 |
| 22 | GO:1901141: regulation of lignin biosynthetic process | 1.01E-03 |
| 23 | GO:0051322: anaphase | 1.01E-03 |
| 24 | GO:0030104: water homeostasis | 1.01E-03 |
| 25 | GO:2000038: regulation of stomatal complex development | 1.01E-03 |
| 26 | GO:0009107: lipoate biosynthetic process | 1.28E-03 |
| 27 | GO:0016123: xanthophyll biosynthetic process | 1.28E-03 |
| 28 | GO:0010375: stomatal complex patterning | 1.28E-03 |
| 29 | GO:0009828: plant-type cell wall loosening | 1.47E-03 |
| 30 | GO:0010252: auxin homeostasis | 1.47E-03 |
| 31 | GO:0010405: arabinogalactan protein metabolic process | 1.57E-03 |
| 32 | GO:0018258: protein O-linked glycosylation via hydroxyproline | 1.57E-03 |
| 33 | GO:0006655: phosphatidylglycerol biosynthetic process | 1.57E-03 |
| 34 | GO:0042793: transcription from plastid promoter | 1.57E-03 |
| 35 | GO:0040008: regulation of growth | 1.79E-03 |
| 36 | GO:0009942: longitudinal axis specification | 1.88E-03 |
| 37 | GO:2000067: regulation of root morphogenesis | 1.88E-03 |
| 38 | GO:0030307: positive regulation of cell growth | 2.21E-03 |
| 39 | GO:0055075: potassium ion homeostasis | 2.56E-03 |
| 40 | GO:0007389: pattern specification process | 2.93E-03 |
| 41 | GO:0010497: plasmodesmata-mediated intercellular transport | 2.93E-03 |
| 42 | GO:0009657: plastid organization | 2.93E-03 |
| 43 | GO:0009733: response to auxin | 3.03E-03 |
| 44 | GO:0009826: unidimensional cell growth | 3.15E-03 |
| 45 | GO:0009638: phototropism | 3.71E-03 |
| 46 | GO:1900865: chloroplast RNA modification | 3.71E-03 |
| 47 | GO:0031425: chloroplast RNA processing | 3.71E-03 |
| 48 | GO:2000280: regulation of root development | 3.71E-03 |
| 49 | GO:0006535: cysteine biosynthetic process from serine | 4.12E-03 |
| 50 | GO:0006949: syncytium formation | 4.12E-03 |
| 51 | GO:0006259: DNA metabolic process | 4.12E-03 |
| 52 | GO:0080167: response to karrikin | 4.34E-03 |
| 53 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 4.53E-03 |
| 54 | GO:0010015: root morphogenesis | 4.55E-03 |
| 55 | GO:0006265: DNA topological change | 4.55E-03 |
| 56 | GO:0009664: plant-type cell wall organization | 4.61E-03 |
| 57 | GO:0016024: CDP-diacylglycerol biosynthetic process | 4.99E-03 |
| 58 | GO:0005975: carbohydrate metabolic process | 5.13E-03 |
| 59 | GO:2000012: regulation of auxin polar transport | 5.45E-03 |
| 60 | GO:0009785: blue light signaling pathway | 5.45E-03 |
| 61 | GO:0009691: cytokinin biosynthetic process | 5.45E-03 |
| 62 | GO:0010207: photosystem II assembly | 5.92E-03 |
| 63 | GO:0006863: purine nucleobase transport | 6.91E-03 |
| 64 | GO:0006833: water transport | 6.91E-03 |
| 65 | GO:0019344: cysteine biosynthetic process | 7.42E-03 |
| 66 | GO:0010073: meristem maintenance | 7.95E-03 |
| 67 | GO:0051302: regulation of cell division | 7.95E-03 |
| 68 | GO:0006418: tRNA aminoacylation for protein translation | 7.95E-03 |
| 69 | GO:0007275: multicellular organism development | 8.06E-03 |
| 70 | GO:0016998: cell wall macromolecule catabolic process | 8.49E-03 |
| 71 | GO:0015992: proton transport | 8.49E-03 |
| 72 | GO:0031348: negative regulation of defense response | 9.05E-03 |
| 73 | GO:0009686: gibberellin biosynthetic process | 9.62E-03 |
| 74 | GO:0010082: regulation of root meristem growth | 9.62E-03 |
| 75 | GO:0071555: cell wall organization | 9.66E-03 |
| 76 | GO:0045492: xylan biosynthetic process | 1.02E-02 |
| 77 | GO:0080022: primary root development | 1.14E-02 |
| 78 | GO:0008033: tRNA processing | 1.14E-02 |
| 79 | GO:0000226: microtubule cytoskeleton organization | 1.14E-02 |
| 80 | GO:0006662: glycerol ether metabolic process | 1.20E-02 |
| 81 | GO:0048868: pollen tube development | 1.20E-02 |
| 82 | GO:0009741: response to brassinosteroid | 1.20E-02 |
| 83 | GO:0010268: brassinosteroid homeostasis | 1.20E-02 |
| 84 | GO:0007059: chromosome segregation | 1.26E-02 |
| 85 | GO:0008654: phospholipid biosynthetic process | 1.33E-02 |
| 86 | GO:0016132: brassinosteroid biosynthetic process | 1.39E-02 |
| 87 | GO:0080156: mitochondrial mRNA modification | 1.39E-02 |
| 88 | GO:0048510: regulation of timing of transition from vegetative to reproductive phase | 1.39E-02 |
| 89 | GO:0071554: cell wall organization or biogenesis | 1.39E-02 |
| 90 | GO:0010583: response to cyclopentenone | 1.46E-02 |
| 91 | GO:0009416: response to light stimulus | 1.47E-02 |
| 92 | GO:1901657: glycosyl compound metabolic process | 1.53E-02 |
| 93 | GO:0006464: cellular protein modification process | 1.60E-02 |
| 94 | GO:0016125: sterol metabolic process | 1.60E-02 |
| 95 | GO:0007267: cell-cell signaling | 1.67E-02 |
| 96 | GO:0000910: cytokinesis | 1.74E-02 |
| 97 | GO:0010027: thylakoid membrane organization | 1.81E-02 |
| 98 | GO:0009658: chloroplast organization | 1.89E-02 |
| 99 | GO:0010411: xyloglucan metabolic process | 2.03E-02 |
| 100 | GO:0048481: plant ovule development | 2.19E-02 |
| 101 | GO:0000160: phosphorelay signal transduction system | 2.26E-02 |
| 102 | GO:0010311: lateral root formation | 2.26E-02 |
| 103 | GO:0009631: cold acclimation | 2.42E-02 |
| 104 | GO:0034599: cellular response to oxidative stress | 2.67E-02 |
| 105 | GO:0006839: mitochondrial transport | 2.84E-02 |
| 106 | GO:0010114: response to red light | 3.10E-02 |
| 107 | GO:0009640: photomorphogenesis | 3.10E-02 |
| 108 | GO:0042546: cell wall biogenesis | 3.19E-02 |
| 109 | GO:0008643: carbohydrate transport | 3.28E-02 |
| 110 | GO:0006855: drug transmembrane transport | 3.46E-02 |
| 111 | GO:0009736: cytokinin-activated signaling pathway | 3.83E-02 |
| 112 | GO:0051603: proteolysis involved in cellular protein catabolic process | 3.93E-02 |
| 113 | GO:0006857: oligopeptide transport | 4.02E-02 |
| 114 | GO:0048316: seed development | 4.42E-02 |
| 115 | GO:0009740: gibberellic acid mediated signaling pathway | 4.72E-02 |
| 116 | GO:0016567: protein ubiquitination | 4.99E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0001872: (1->3)-beta-D-glucan binding | 8.70E-06 |
| 2 | GO:0004830: tryptophan-tRNA ligase activity | 1.42E-04 |
| 3 | GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity | 1.42E-04 |
| 4 | GO:0005290: L-histidine transmembrane transporter activity | 1.42E-04 |
| 5 | GO:0003867: 4-aminobutyrate transaminase activity | 1.42E-04 |
| 6 | GO:0033946: xyloglucan-specific endo-beta-1,4-glucanase activity | 1.42E-04 |
| 7 | GO:0052381: tRNA dimethylallyltransferase activity | 1.42E-04 |
| 8 | GO:0051777: ent-kaurenoate oxidase activity | 1.42E-04 |
| 9 | GO:0017118: lipoyltransferase activity | 3.25E-04 |
| 10 | GO:0016415: octanoyltransferase activity | 3.25E-04 |
| 11 | GO:0008805: carbon-monoxide oxygenase activity | 3.25E-04 |
| 12 | GO:0000064: L-ornithine transmembrane transporter activity | 3.25E-04 |
| 13 | GO:0016805: dipeptidase activity | 5.33E-04 |
| 14 | GO:0015189: L-lysine transmembrane transporter activity | 7.63E-04 |
| 15 | GO:0015181: arginine transmembrane transporter activity | 7.63E-04 |
| 16 | GO:0009678: hydrogen-translocating pyrophosphatase activity | 7.63E-04 |
| 17 | GO:0046556: alpha-L-arabinofuranosidase activity | 1.01E-03 |
| 18 | GO:0016279: protein-lysine N-methyltransferase activity | 1.01E-03 |
| 19 | GO:0070696: transmembrane receptor protein serine/threonine kinase binding | 1.28E-03 |
| 20 | GO:0004605: phosphatidate cytidylyltransferase activity | 1.57E-03 |
| 21 | GO:1990714: hydroxyproline O-galactosyltransferase activity | 1.57E-03 |
| 22 | GO:0004656: procollagen-proline 4-dioxygenase activity | 1.88E-03 |
| 23 | GO:0004124: cysteine synthase activity | 1.88E-03 |
| 24 | GO:0016832: aldehyde-lyase activity | 1.88E-03 |
| 25 | GO:0030247: polysaccharide binding | 2.05E-03 |
| 26 | GO:0004427: inorganic diphosphatase activity | 2.21E-03 |
| 27 | GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity | 2.93E-03 |
| 28 | GO:0009672: auxin:proton symporter activity | 3.71E-03 |
| 29 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 5.05E-03 |
| 30 | GO:0004022: alcohol dehydrogenase (NAD) activity | 5.45E-03 |
| 31 | GO:0004565: beta-galactosidase activity | 5.45E-03 |
| 32 | GO:0010329: auxin efflux transmembrane transporter activity | 5.45E-03 |
| 33 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 5.92E-03 |
| 34 | GO:0004650: polygalacturonase activity | 6.43E-03 |
| 35 | GO:0031418: L-ascorbic acid binding | 7.42E-03 |
| 36 | GO:0005345: purine nucleobase transmembrane transporter activity | 7.95E-03 |
| 37 | GO:0008408: 3'-5' exonuclease activity | 8.49E-03 |
| 38 | GO:0004707: MAP kinase activity | 8.49E-03 |
| 39 | GO:0022891: substrate-specific transmembrane transporter activity | 9.62E-03 |
| 40 | GO:0047134: protein-disulfide reductase activity | 1.08E-02 |
| 41 | GO:0004812: aminoacyl-tRNA ligase activity | 1.08E-02 |
| 42 | GO:0004527: exonuclease activity | 1.20E-02 |
| 43 | GO:0001085: RNA polymerase II transcription factor binding | 1.20E-02 |
| 44 | GO:0004791: thioredoxin-disulfide reductase activity | 1.26E-02 |
| 45 | GO:0008017: microtubule binding | 1.28E-02 |
| 46 | GO:0019901: protein kinase binding | 1.33E-02 |
| 47 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 1.39E-02 |
| 48 | GO:0000156: phosphorelay response regulator activity | 1.53E-02 |
| 49 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 1.53E-02 |
| 50 | GO:0008237: metallopeptidase activity | 1.67E-02 |
| 51 | GO:0016413: O-acetyltransferase activity | 1.74E-02 |
| 52 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 2.03E-02 |
| 53 | GO:0102483: scopolin beta-glucosidase activity | 2.03E-02 |
| 54 | GO:0015238: drug transmembrane transporter activity | 2.26E-02 |
| 55 | GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 2.42E-02 |
| 56 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 2.42E-02 |
| 57 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 2.59E-02 |
| 58 | GO:0004712: protein serine/threonine/tyrosine kinase activity | 2.76E-02 |
| 59 | GO:0008422: beta-glucosidase activity | 2.76E-02 |
| 60 | GO:0042393: histone binding | 2.84E-02 |
| 61 | GO:0004185: serine-type carboxypeptidase activity | 3.10E-02 |
| 62 | GO:0004519: endonuclease activity | 3.76E-02 |
| 63 | GO:0004674: protein serine/threonine kinase activity | 3.83E-02 |
| 64 | GO:0005215: transporter activity | 4.04E-02 |
| 65 | GO:0003777: microtubule motor activity | 4.12E-02 |
| 66 | GO:0008234: cysteine-type peptidase activity | 4.12E-02 |
| 67 | GO:0016874: ligase activity | 4.72E-02 |