co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G46090

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0043048: dolichyl monophosphate biosynthetic process	0.00E+00
2	GO:1902289: negative regulation of defense response to oomycetes	0.00E+00
3	GO:0098755: maintenance of seed dormancy by absisic acid	0.00E+00
4	GO:1900367: positive regulation of defense response to insect	0.00E+00
5	GO:2000378: negative regulation of reactive oxygen species metabolic process	0.00E+00
6	GO:0002376: immune system process	0.00E+00
7	GO:1902009: positive regulation of toxin transport	0.00E+00
8	GO:0010324: membrane invagination	0.00E+00
9	GO:0071327: cellular response to trehalose stimulus	0.00E+00
10	GO:0010200: response to chitin	2.85E-11
11	GO:0009751: response to salicylic acid	4.55E-07
12	GO:0019725: cellular homeostasis	6.59E-06
13	GO:0006468: protein phosphorylation	8.60E-05
14	GO:0060548: negative regulation of cell death	8.90E-05
15	GO:0009737: response to abscisic acid	1.02E-04
16	GO:0007034: vacuolar transport	1.14E-04
17	GO:0009266: response to temperature stimulus	1.14E-04
18	GO:0006470: protein dephosphorylation	1.22E-04
19	GO:0009617: response to bacterium	1.35E-04
20	GO:0010225: response to UV-C	1.39E-04
21	GO:0045927: positive regulation of growth	1.39E-04
22	GO:0034052: positive regulation of plant-type hypersensitive response	1.39E-04
23	GO:0009626: plant-type hypersensitive response	1.46E-04
24	GO:0009759: indole glucosinolate biosynthetic process	1.99E-04
25	GO:0031348: negative regulation of defense response	2.75E-04
26	GO:1900056: negative regulation of leaf senescence	3.47E-04
27	GO:0051938: L-glutamate import	3.84E-04
28	GO:0015969: guanosine tetraphosphate metabolic process	3.84E-04
29	GO:0009609: response to symbiotic bacterium	3.84E-04
30	GO:0010421: hydrogen peroxide-mediated programmed cell death	3.84E-04
31	GO:0006562: proline catabolic process	3.84E-04
32	GO:0010482: regulation of epidermal cell division	3.84E-04
33	GO:0007229: integrin-mediated signaling pathway	3.84E-04
34	GO:1901183: positive regulation of camalexin biosynthetic process	3.84E-04
35	GO:0019478: D-amino acid catabolic process	3.84E-04
36	GO:0009270: response to humidity	3.84E-04
37	GO:0050691: regulation of defense response to virus by host	3.84E-04
38	GO:0010150: leaf senescence	5.29E-04
39	GO:2000031: regulation of salicylic acid mediated signaling pathway	5.32E-04
40	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	7.52E-04
41	GO:0009611: response to wounding	8.03E-04
42	GO:0010618: aerenchyma formation	8.33E-04
43	GO:0044419: interspecies interaction between organisms	8.33E-04
44	GO:0000719: photoreactive repair	8.33E-04
45	GO:0031349: positive regulation of defense response	8.33E-04
46	GO:0034243: regulation of transcription elongation from RNA polymerase II promoter	8.33E-04
47	GO:0043091: L-arginine import	8.33E-04
48	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	8.33E-04
49	GO:0010133: proline catabolic process to glutamate	8.33E-04
50	GO:0009838: abscission	8.33E-04
51	GO:0015802: basic amino acid transport	8.33E-04
52	GO:0035556: intracellular signal transduction	8.61E-04
53	GO:0001666: response to hypoxia	9.84E-04
54	GO:0008361: regulation of cell size	1.15E-03
55	GO:0012501: programmed cell death	1.15E-03
56	GO:0042742: defense response to bacterium	1.16E-03
57	GO:0032786: positive regulation of DNA-templated transcription, elongation	1.35E-03
58	GO:0042218: 1-aminocyclopropane-1-carboxylate biosynthetic process	1.35E-03
59	GO:0009653: anatomical structure morphogenesis	1.35E-03
60	GO:0006048: UDP-N-acetylglucosamine biosynthetic process	1.35E-03
61	GO:0009062: fatty acid catabolic process	1.35E-03
62	GO:1900140: regulation of seedling development	1.35E-03
63	GO:0045793: positive regulation of cell size	1.35E-03
64	GO:0010186: positive regulation of cellular defense response	1.35E-03
65	GO:0002237: response to molecule of bacterial origin	1.47E-03
66	GO:0046777: protein autophosphorylation	1.88E-03
67	GO:0034219: carbohydrate transmembrane transport	1.95E-03
68	GO:0070301: cellular response to hydrogen peroxide	1.95E-03
69	GO:0043207: response to external biotic stimulus	1.95E-03
70	GO:0072334: UDP-galactose transmembrane transport	1.95E-03
71	GO:0015749: monosaccharide transport	1.95E-03
72	GO:0006537: glutamate biosynthetic process	1.95E-03
73	GO:0072583: clathrin-dependent endocytosis	1.95E-03
74	GO:0015696: ammonium transport	1.95E-03
75	GO:0002679: respiratory burst involved in defense response	1.95E-03
76	GO:0051289: protein homotetramerization	1.95E-03
77	GO:0045892: negative regulation of transcription, DNA-templated	2.35E-03
78	GO:0051707: response to other organism	2.56E-03
79	GO:0046345: abscisic acid catabolic process	2.62E-03
80	GO:0010483: pollen tube reception	2.62E-03
81	GO:0009652: thigmotropism	2.62E-03
82	GO:0045088: regulation of innate immune response	2.62E-03
83	GO:1902584: positive regulation of response to water deprivation	2.62E-03
84	GO:0072488: ammonium transmembrane transport	2.62E-03
85	GO:1901002: positive regulation of response to salt stress	2.62E-03
86	GO:0051567: histone H3-K9 methylation	2.62E-03
87	GO:0010188: response to microbial phytotoxin	2.62E-03
88	GO:0080142: regulation of salicylic acid biosynthetic process	2.62E-03
89	GO:0000209: protein polyubiquitination	2.70E-03
90	GO:0071456: cellular response to hypoxia	2.70E-03
91	GO:0009625: response to insect	2.95E-03
92	GO:0009306: protein secretion	3.20E-03
93	GO:0031347: regulation of defense response	3.27E-03
94	GO:0009414: response to water deprivation	3.40E-03
95	GO:0009753: response to jasmonic acid	3.75E-03
96	GO:0006662: glycerol ether metabolic process	4.05E-03
97	GO:0046323: glucose import	4.05E-03
98	GO:1900425: negative regulation of defense response to bacterium	4.14E-03
99	GO:0010942: positive regulation of cell death	4.14E-03
100	GO:0042372: phylloquinone biosynthetic process	4.99E-03
101	GO:0034389: lipid particle organization	4.99E-03
102	GO:0009094: L-phenylalanine biosynthetic process	4.99E-03
103	GO:0009612: response to mechanical stimulus	4.99E-03
104	GO:0031930: mitochondria-nucleus signaling pathway	4.99E-03
105	GO:0010310: regulation of hydrogen peroxide metabolic process	4.99E-03
106	GO:0010193: response to ozone	5.00E-03
107	GO:0009620: response to fungus	5.24E-03
108	GO:0043090: amino acid import	5.89E-03
109	GO:0071446: cellular response to salicylic acid stimulus	5.89E-03
110	GO:0080186: developmental vegetative growth	5.89E-03
111	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	5.89E-03
112	GO:0010161: red light signaling pathway	5.89E-03
113	GO:0009610: response to symbiotic fungus	5.89E-03
114	GO:0018105: peptidyl-serine phosphorylation	6.11E-03
115	GO:0006904: vesicle docking involved in exocytosis	6.44E-03
116	GO:0051607: defense response to virus	6.83E-03
117	GO:0035265: organ growth	6.85E-03
118	GO:0009787: regulation of abscisic acid-activated signaling pathway	6.85E-03
119	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	6.85E-03
120	GO:1900150: regulation of defense response to fungus	6.85E-03
121	GO:0006605: protein targeting	6.85E-03
122	GO:0009816: defense response to bacterium, incompatible interaction	7.65E-03
123	GO:0010099: regulation of photomorphogenesis	7.86E-03
124	GO:0010120: camalexin biosynthetic process	7.86E-03
125	GO:0030968: endoplasmic reticulum unfolded protein response	7.86E-03
126	GO:0009651: response to salt stress	8.35E-03
127	GO:0009738: abscisic acid-activated signaling pathway	8.54E-03
128	GO:0046685: response to arsenic-containing substance	8.92E-03
129	GO:0009821: alkaloid biosynthetic process	8.92E-03
130	GO:0051865: protein autoubiquitination	8.92E-03
131	GO:0010112: regulation of systemic acquired resistance	8.92E-03
132	GO:0009835: fruit ripening	8.92E-03
133	GO:1900426: positive regulation of defense response to bacterium	1.00E-02
134	GO:0006979: response to oxidative stress	1.08E-02
135	GO:0006325: chromatin organization	1.12E-02
136	GO:0006032: chitin catabolic process	1.12E-02
137	GO:0009682: induced systemic resistance	1.24E-02
138	GO:0019684: photosynthesis, light reaction	1.24E-02
139	GO:0052544: defense response by callose deposition in cell wall	1.24E-02
140	GO:0048765: root hair cell differentiation	1.24E-02
141	GO:0034599: cellular response to oxidative stress	1.26E-02
142	GO:0002213: defense response to insect	1.37E-02
143	GO:0015706: nitrate transport	1.37E-02
144	GO:0010105: negative regulation of ethylene-activated signaling pathway	1.37E-02
145	GO:0007166: cell surface receptor signaling pathway	1.40E-02
146	GO:2000012: regulation of auxin polar transport	1.49E-02
147	GO:0055046: microgametogenesis	1.49E-02
148	GO:0050832: defense response to fungus	1.51E-02
149	GO:0009636: response to toxic substance	1.75E-02
150	GO:0007030: Golgi organization	1.77E-02
151	GO:0010167: response to nitrate	1.77E-02
152	GO:0070588: calcium ion transmembrane transport	1.77E-02
153	GO:0046854: phosphatidylinositol phosphorylation	1.77E-02
154	GO:0010053: root epidermal cell differentiation	1.77E-02
155	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	1.88E-02
156	GO:0000162: tryptophan biosynthetic process	1.91E-02
157	GO:0042538: hyperosmotic salinity response	1.95E-02
158	GO:0009116: nucleoside metabolic process	2.05E-02
159	GO:0030150: protein import into mitochondrial matrix	2.05E-02
160	GO:0080147: root hair cell development	2.05E-02
161	GO:0005992: trehalose biosynthetic process	2.05E-02
162	GO:0051302: regulation of cell division	2.20E-02
163	GO:0010026: trichome differentiation	2.20E-02
164	GO:0019915: lipid storage	2.36E-02
165	GO:0048278: vesicle docking	2.36E-02
166	GO:0003333: amino acid transmembrane transport	2.36E-02
167	GO:0016998: cell wall macromolecule catabolic process	2.36E-02
168	GO:0009723: response to ethylene	2.47E-02
169	GO:0016226: iron-sulfur cluster assembly	2.51E-02
170	GO:0035428: hexose transmembrane transport	2.51E-02
171	GO:2000022: regulation of jasmonic acid mediated signaling pathway	2.51E-02
172	GO:0030433: ubiquitin-dependent ERAD pathway	2.51E-02
173	GO:0009693: ethylene biosynthetic process	2.67E-02
174	GO:0009411: response to UV	2.67E-02
175	GO:0080167: response to karrikin	2.70E-02
176	GO:0006952: defense response	2.84E-02
177	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	3.01E-02
178	GO:0009742: brassinosteroid mediated signaling pathway	3.17E-02
179	GO:0010118: stomatal movement	3.18E-02
180	GO:0009741: response to brassinosteroid	3.35E-02
181	GO:0045454: cell redox homeostasis	3.37E-02
182	GO:0006886: intracellular protein transport	3.51E-02
183	GO:0009646: response to absence of light	3.53E-02
184	GO:0061025: membrane fusion	3.53E-02
185	GO:0008654: phospholipid biosynthetic process	3.71E-02
186	GO:0071554: cell wall organization or biogenesis	3.89E-02
187	GO:0006635: fatty acid beta-oxidation	3.89E-02
188	GO:0009058: biosynthetic process	3.94E-02
189	GO:0007264: small GTPase mediated signal transduction	4.08E-02
190	GO:0016032: viral process	4.08E-02
191	GO:0019760: glucosinolate metabolic process	4.46E-02

Rank	GO Term	Adjusted P value
1	GO:0004610: phosphoacetylglucosamine mutase activity	0.00E+00
2	GO:0005358: high-affinity hydrogen:glucose symporter activity	0.00E+00
3	GO:0051499: D-aminoacyl-tRNA deacylase activity	0.00E+00
4	GO:0004168: dolichol kinase activity	0.00E+00
5	GO:0016301: kinase activity	9.34E-05
6	GO:0005509: calcium ion binding	2.91E-04
7	GO:0004672: protein kinase activity	3.34E-04
8	GO:0008809: carnitine racemase activity	3.84E-04
9	GO:2001227: quercitrin binding	3.84E-04
10	GO:0004425: indole-3-glycerol-phosphate synthase activity	3.84E-04
11	GO:0015085: calcium ion transmembrane transporter activity	3.84E-04
12	GO:0050308: sugar-phosphatase activity	3.84E-04
13	GO:0004657: proline dehydrogenase activity	3.84E-04
14	GO:0015398: high-affinity secondary active ammonium transmembrane transporter activity	3.84E-04
15	GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity	3.84E-04
16	GO:2001147: camalexin binding	3.84E-04
17	GO:0009679: hexose:proton symporter activity	3.84E-04
18	GO:0032050: clathrin heavy chain binding	3.84E-04
19	GO:0004722: protein serine/threonine phosphatase activity	6.78E-04
20	GO:0015036: disulfide oxidoreductase activity	8.33E-04
21	GO:0008728: GTP diphosphokinase activity	8.33E-04
22	GO:0009931: calcium-dependent protein serine/threonine kinase activity	1.13E-03
23	GO:0004683: calmodulin-dependent protein kinase activity	1.20E-03
24	GO:0004674: protein serine/threonine kinase activity	1.71E-03
25	GO:0043565: sequence-specific DNA binding	1.92E-03
26	GO:0015189: L-lysine transmembrane transporter activity	1.95E-03
27	GO:0015181: arginine transmembrane transporter activity	1.95E-03
28	GO:0016656: monodehydroascorbate reductase (NADH) activity	1.95E-03
29	GO:0004165: dodecenoyl-CoA delta-isomerase activity	1.95E-03
30	GO:0004712: protein serine/threonine/tyrosine kinase activity	2.07E-03
31	GO:0043424: protein histidine kinase binding	2.25E-03
32	GO:0004664: prephenate dehydratase activity	2.62E-03
33	GO:0005313: L-glutamate transmembrane transporter activity	2.62E-03
34	GO:0000993: RNA polymerase II core binding	2.62E-03
35	GO:0047769: arogenate dehydratase activity	2.62E-03
36	GO:0005524: ATP binding	3.15E-03
37	GO:0010294: abscisic acid glucosyltransferase activity	3.35E-03
38	GO:0005459: UDP-galactose transmembrane transporter activity	3.35E-03
39	GO:0015145: monosaccharide transmembrane transporter activity	3.35E-03
40	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	3.35E-03
41	GO:0047134: protein-disulfide reductase activity	3.47E-03
42	GO:0004605: phosphatidate cytidylyltransferase activity	4.14E-03
43	GO:0008519: ammonium transmembrane transporter activity	4.14E-03
44	GO:0004791: thioredoxin-disulfide reductase activity	4.35E-03
45	GO:0004656: procollagen-proline 4-dioxygenase activity	4.99E-03
46	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	5.69E-03
47	GO:0008320: protein transmembrane transporter activity	5.89E-03
48	GO:0043295: glutathione binding	5.89E-03
49	GO:0015035: protein disulfide oxidoreductase activity	6.11E-03
50	GO:0016847: 1-aminocyclopropane-1-carboxylate synthase activity	6.85E-03
51	GO:0005544: calcium-dependent phospholipid binding	6.85E-03
52	GO:0004869: cysteine-type endopeptidase inhibitor activity	6.85E-03
53	GO:0004714: transmembrane receptor protein tyrosine kinase activity	6.85E-03
54	GO:0004430: 1-phosphatidylinositol 4-kinase activity	7.86E-03
55	GO:0005515: protein binding	8.18E-03
56	GO:0004806: triglyceride lipase activity	8.53E-03
57	GO:0071949: FAD binding	8.92E-03
58	GO:0004871: signal transducer activity	9.70E-03
59	GO:0015174: basic amino acid transmembrane transporter activity	1.00E-02
60	GO:0047617: acyl-CoA hydrolase activity	1.00E-02
61	GO:0016844: strictosidine synthase activity	1.00E-02
62	GO:0015112: nitrate transmembrane transporter activity	1.00E-02
63	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.08E-02
64	GO:0004713: protein tyrosine kinase activity	1.12E-02
65	GO:0004805: trehalose-phosphatase activity	1.12E-02
66	GO:0030234: enzyme regulator activity	1.12E-02
67	GO:0004568: chitinase activity	1.12E-02
68	GO:0003746: translation elongation factor activity	1.20E-02
69	GO:0005543: phospholipid binding	1.24E-02
70	GO:0005388: calcium-transporting ATPase activity	1.49E-02
71	GO:0051119: sugar transmembrane transporter activity	1.77E-02
72	GO:0005516: calmodulin binding	1.83E-02
73	GO:0031418: L-ascorbic acid binding	2.05E-02
74	GO:0015171: amino acid transmembrane transporter activity	2.32E-02
75	GO:0004707: MAP kinase activity	2.36E-02
76	GO:0033612: receptor serine/threonine kinase binding	2.36E-02
77	GO:0003727: single-stranded RNA binding	2.84E-02
78	GO:0061630: ubiquitin protein ligase activity	2.87E-02
79	GO:0016746: transferase activity, transferring acyl groups	3.08E-02
80	GO:0005355: glucose transmembrane transporter activity	3.53E-02
81	GO:0019901: protein kinase binding	3.71E-02
82	GO:0016740: transferase activity	3.90E-02
83	GO:0004197: cysteine-type endopeptidase activity	4.08E-02
84	GO:0015144: carbohydrate transmembrane transporter activity	4.46E-02
85	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	4.66E-02
86	GO:0016413: O-acetyltransferase activity	4.85E-02
87	GO:0016597: amino acid binding	4.85E-02