Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G45430

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006429: leucyl-tRNA aminoacylation0.00E+00
2GO:1905421: regulation of plant organ morphogenesis0.00E+00
3GO:0043488: regulation of mRNA stability0.00E+00
4GO:0030155: regulation of cell adhesion0.00E+00
5GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate0.00E+00
6GO:0000489: maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)0.00E+00
7GO:0000455: enzyme-directed rRNA pseudouridine synthesis0.00E+00
8GO:0017038: protein import0.00E+00
9GO:0042407: cristae formation0.00E+00
10GO:0046460: neutral lipid biosynthetic process0.00E+00
11GO:0031116: positive regulation of microtubule polymerization0.00E+00
12GO:0031129: inductive cell-cell signaling0.00E+00
13GO:0042817: pyridoxal metabolic process0.00E+00
14GO:0000488: maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)0.00E+00
15GO:0006399: tRNA metabolic process0.00E+00
16GO:0070125: mitochondrial translational elongation0.00E+00
17GO:0009658: chloroplast organization1.11E-09
18GO:0006415: translational termination5.40E-05
19GO:0006730: one-carbon metabolic process2.42E-04
20GO:0006419: alanyl-tRNA aminoacylation3.60E-04
21GO:2000025: regulation of leaf formation3.60E-04
22GO:0046901: tetrahydrofolylpolyglutamate biosynthetic process3.60E-04
23GO:0000476: maturation of 4.5S rRNA3.60E-04
24GO:0000967: rRNA 5'-end processing3.60E-04
25GO:0010482: regulation of epidermal cell division3.60E-04
26GO:0043266: regulation of potassium ion transport3.60E-04
27GO:0042547: cell wall modification involved in multidimensional cell growth3.60E-04
28GO:0042371: vitamin K biosynthetic process3.60E-04
29GO:2000021: regulation of ion homeostasis3.60E-04
30GO:1902458: positive regulation of stomatal opening3.60E-04
31GO:0071482: cellular response to light stimulus4.86E-04
32GO:0009657: plastid organization4.86E-04
33GO:0032544: plastid translation4.86E-04
34GO:0000373: Group II intron splicing5.82E-04
35GO:1900865: chloroplast RNA modification6.87E-04
36GO:0015804: neutral amino acid transport7.83E-04
37GO:0034470: ncRNA processing7.83E-04
38GO:0006739: NADP metabolic process7.83E-04
39GO:2000039: regulation of trichome morphogenesis7.83E-04
40GO:0034755: iron ion transmembrane transport7.83E-04
41GO:0006423: cysteinyl-tRNA aminoacylation7.83E-04
42GO:0007154: cell communication7.83E-04
43GO:1900033: negative regulation of trichome patterning7.83E-04
44GO:0042814: monopolar cell growth7.83E-04
45GO:0009220: pyrimidine ribonucleotide biosynthetic process7.83E-04
46GO:1903426: regulation of reactive oxygen species biosynthetic process7.83E-04
47GO:0045036: protein targeting to chloroplast8.01E-04
48GO:0006352: DNA-templated transcription, initiation9.22E-04
49GO:0009627: systemic acquired resistance1.00E-03
50GO:0045037: protein import into chloroplast stroma1.05E-03
51GO:2000012: regulation of auxin polar transport1.19E-03
52GO:0033591: response to L-ascorbic acid1.27E-03
53GO:0048281: inflorescence morphogenesis1.27E-03
54GO:0006954: inflammatory response1.27E-03
55GO:0045604: regulation of epidermal cell differentiation1.27E-03
56GO:0001578: microtubule bundle formation1.27E-03
57GO:0045493: xylan catabolic process1.27E-03
58GO:0090351: seedling development1.50E-03
59GO:0009102: biotin biosynthetic process1.83E-03
60GO:0051639: actin filament network formation1.83E-03
61GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity1.83E-03
62GO:0009226: nucleotide-sugar biosynthetic process1.83E-03
63GO:0008615: pyridoxine biosynthetic process1.83E-03
64GO:0010148: transpiration1.83E-03
65GO:0048530: fruit morphogenesis1.83E-03
66GO:0006168: adenine salvage1.83E-03
67GO:0016556: mRNA modification1.83E-03
68GO:2001141: regulation of RNA biosynthetic process1.83E-03
69GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly1.83E-03
70GO:0006166: purine ribonucleoside salvage1.83E-03
71GO:0040008: regulation of growth2.05E-03
72GO:0051764: actin crosslink formation2.45E-03
73GO:0051322: anaphase2.45E-03
74GO:0009765: photosynthesis, light harvesting2.45E-03
75GO:0022622: root system development2.45E-03
76GO:0007020: microtubule nucleation2.45E-03
77GO:0071483: cellular response to blue light2.45E-03
78GO:0006734: NADH metabolic process2.45E-03
79GO:0044205: 'de novo' UMP biosynthetic process2.45E-03
80GO:0048629: trichome patterning2.45E-03
81GO:0010109: regulation of photosynthesis2.45E-03
82GO:0009793: embryo development ending in seed dormancy2.55E-03
83GO:0009965: leaf morphogenesis2.64E-03
84GO:0016123: xanthophyll biosynthetic process3.14E-03
85GO:0044209: AMP salvage3.14E-03
86GO:0010158: abaxial cell fate specification3.14E-03
87GO:0046785: microtubule polymerization3.14E-03
88GO:0016120: carotene biosynthetic process3.14E-03
89GO:0032543: mitochondrial translation3.14E-03
90GO:0010236: plastoquinone biosynthetic process3.14E-03
91GO:0045038: protein import into chloroplast thylakoid membrane3.14E-03
92GO:0009733: response to auxin3.75E-03
93GO:0016554: cytidine to uridine editing3.88E-03
94GO:0006655: phosphatidylglycerol biosynthetic process3.88E-03
95GO:0032973: amino acid export3.88E-03
96GO:0009648: photoperiodism4.67E-03
97GO:0042372: phylloquinone biosynthetic process4.67E-03
98GO:0034389: lipid particle organization4.67E-03
99GO:2000033: regulation of seed dormancy process4.67E-03
100GO:0030488: tRNA methylation4.67E-03
101GO:0048444: floral organ morphogenesis4.67E-03
102GO:0080086: stamen filament development4.67E-03
103GO:0009734: auxin-activated signaling pathway5.12E-03
104GO:0009395: phospholipid catabolic process5.52E-03
105GO:0048528: post-embryonic root development5.52E-03
106GO:0009772: photosynthetic electron transport in photosystem II5.52E-03
107GO:0043090: amino acid import5.52E-03
108GO:0010050: vegetative phase change5.52E-03
109GO:0010196: nonphotochemical quenching5.52E-03
110GO:0070370: cellular heat acclimation5.52E-03
111GO:0010444: guard mother cell differentiation5.52E-03
112GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process5.52E-03
113GO:0006400: tRNA modification5.52E-03
114GO:0010103: stomatal complex morphogenesis5.52E-03
115GO:0032880: regulation of protein localization5.52E-03
116GO:0006402: mRNA catabolic process6.41E-03
117GO:0009850: auxin metabolic process6.41E-03
118GO:0042255: ribosome assembly6.41E-03
119GO:0046620: regulation of organ growth6.41E-03
120GO:0006605: protein targeting6.41E-03
121GO:0006353: DNA-templated transcription, termination6.41E-03
122GO:0070413: trehalose metabolism in response to stress6.41E-03
123GO:0009704: de-etiolation6.41E-03
124GO:2000070: regulation of response to water deprivation6.41E-03
125GO:0000105: histidine biosynthetic process6.41E-03
126GO:0010027: thylakoid membrane organization6.58E-03
127GO:0009932: cell tip growth7.36E-03
128GO:0006002: fructose 6-phosphate metabolic process7.36E-03
129GO:0022900: electron transport chain7.36E-03
130GO:0001558: regulation of cell growth7.36E-03
131GO:0019432: triglyceride biosynthetic process8.35E-03
132GO:0080144: amino acid homeostasis8.35E-03
133GO:0009790: embryo development8.46E-03
134GO:0071555: cell wall organization8.84E-03
135GO:0043067: regulation of programmed cell death9.38E-03
136GO:0042761: very long-chain fatty acid biosynthetic process9.38E-03
137GO:0006949: syncytium formation1.05E-02
138GO:0006259: DNA metabolic process1.05E-02
139GO:0010162: seed dormancy process1.05E-02
140GO:0006535: cysteine biosynthetic process from serine1.05E-02
141GO:0010015: root morphogenesis1.16E-02
142GO:0006265: DNA topological change1.16E-02
143GO:1903507: negative regulation of nucleic acid-templated transcription1.16E-02
144GO:0006879: cellular iron ion homeostasis1.16E-02
145GO:0007166: cell surface receptor signaling pathway1.24E-02
146GO:0016024: CDP-diacylglycerol biosynthetic process1.28E-02
147GO:0010582: floral meristem determinacy1.28E-02
148GO:0008380: RNA splicing1.31E-02
149GO:0050826: response to freezing1.40E-02
150GO:0010020: chloroplast fission1.52E-02
151GO:0071732: cellular response to nitric oxide1.65E-02
152GO:0000162: tryptophan biosynthetic process1.78E-02
153GO:0010025: wax biosynthetic process1.78E-02
154GO:0009833: plant-type primary cell wall biogenesis1.78E-02
155GO:0009664: plant-type cell wall organization1.78E-02
156GO:0006071: glycerol metabolic process1.78E-02
157GO:0006364: rRNA processing1.91E-02
158GO:0019344: cysteine biosynthetic process1.92E-02
159GO:0009116: nucleoside metabolic process1.92E-02
160GO:0009944: polarity specification of adaxial/abaxial axis1.92E-02
161GO:0007010: cytoskeleton organization1.92E-02
162GO:0051017: actin filament bundle assembly1.92E-02
163GO:0005992: trehalose biosynthetic process1.92E-02
164GO:0051302: regulation of cell division2.06E-02
165GO:0006418: tRNA aminoacylation for protein translation2.06E-02
166GO:0043622: cortical microtubule organization2.06E-02
167GO:0003333: amino acid transmembrane transport2.20E-02
168GO:0048511: rhythmic process2.20E-02
169GO:0009814: defense response, incompatible interaction2.35E-02
170GO:2000022: regulation of jasmonic acid mediated signaling pathway2.35E-02
171GO:0031348: negative regulation of defense response2.35E-02
172GO:0009831: plant-type cell wall modification involved in multidimensional cell growth2.50E-02
173GO:0071369: cellular response to ethylene stimulus2.50E-02
174GO:0001944: vasculature development2.50E-02
175GO:0010214: seed coat development2.65E-02
176GO:0010091: trichome branching2.65E-02
177GO:0009306: protein secretion2.65E-02
178GO:0016117: carotenoid biosynthetic process2.81E-02
179GO:0009789: positive regulation of abscisic acid-activated signaling pathway2.81E-02
180GO:0008284: positive regulation of cell proliferation2.81E-02
181GO:0048653: anther development2.97E-02
182GO:0000226: microtubule cytoskeleton organization2.97E-02
183GO:0000271: polysaccharide biosynthetic process2.97E-02
184GO:0008033: tRNA processing2.97E-02
185GO:0008360: regulation of cell shape3.13E-02
186GO:0045489: pectin biosynthetic process3.13E-02
187GO:0009958: positive gravitropism3.13E-02
188GO:0010197: polar nucleus fusion3.13E-02
189GO:0010182: sugar mediated signaling pathway3.13E-02
190GO:0006508: proteolysis3.14E-02
191GO:0007059: chromosome segregation3.30E-02
192GO:0009646: response to absence of light3.30E-02
193GO:0042752: regulation of circadian rhythm3.30E-02
194GO:0008654: phospholipid biosynthetic process3.47E-02
195GO:0000302: response to reactive oxygen species3.64E-02
196GO:0016042: lipid catabolic process3.75E-02
197GO:0016032: viral process3.81E-02
198GO:0032502: developmental process3.81E-02
199GO:0071281: cellular response to iron ion3.99E-02
200GO:0010090: trichome morphogenesis3.99E-02
201GO:0009828: plant-type cell wall loosening4.17E-02
202GO:0071805: potassium ion transmembrane transport4.35E-02
203GO:0006413: translational initiation4.36E-02
204GO:0000910: cytokinesis4.54E-02
205GO:0045490: pectin catabolic process4.68E-02
206GO:0009911: positive regulation of flower development4.72E-02
RankGO TermAdjusted P value
1GO:0004076: biotin synthase activity0.00E+00
2GO:0061634: alpha-D-xyloside xylohydrolase0.00E+00
3GO:0004588: orotate phosphoribosyltransferase activity0.00E+00
4GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity0.00E+00
5GO:0004590: orotidine-5'-phosphate decarboxylase activity0.00E+00
6GO:0045435: lycopene epsilon cyclase activity0.00E+00
7GO:0080176: xyloglucan 1,6-alpha-xylosidase activity0.00E+00
8GO:0004823: leucine-tRNA ligase activity0.00E+00
9GO:0003949: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity0.00E+00
10GO:0004326: tetrahydrofolylpolyglutamate synthase activity5.84E-06
11GO:0003747: translation release factor activity2.46E-05
12GO:0016149: translation release factor activity, codon specific4.51E-05
13GO:0016851: magnesium chelatase activity4.51E-05
14GO:0016987: sigma factor activity8.00E-05
15GO:0001053: plastid sigma factor activity8.00E-05
16GO:0050139: nicotinate-N-glucosyltransferase activity3.60E-04
17GO:0005227: calcium activated cation channel activity3.60E-04
18GO:0004733: pyridoxamine-phosphate oxidase activity3.60E-04
19GO:0004813: alanine-tRNA ligase activity3.60E-04
20GO:0052856: NADHX epimerase activity3.60E-04
21GO:0052857: NADPHX epimerase activity3.60E-04
22GO:0004817: cysteine-tRNA ligase activity7.83E-04
23GO:0015172: acidic amino acid transmembrane transporter activity7.83E-04
24GO:0050017: L-3-cyanoalanine synthase activity7.83E-04
25GO:0009977: proton motive force dependent protein transmembrane transporter activity7.83E-04
26GO:0015462: ATPase-coupled protein transmembrane transporter activity1.27E-03
27GO:0002161: aminoacyl-tRNA editing activity1.27E-03
28GO:0004557: alpha-galactosidase activity1.27E-03
29GO:0052692: raffinose alpha-galactosidase activity1.27E-03
30GO:0015175: neutral amino acid transmembrane transporter activity1.83E-03
31GO:0003999: adenine phosphoribosyltransferase activity1.83E-03
32GO:0016656: monodehydroascorbate reductase (NADH) activity1.83E-03
33GO:0004176: ATP-dependent peptidase activity2.25E-03
34GO:0003723: RNA binding2.32E-03
35GO:0004045: aminoacyl-tRNA hydrolase activity2.45E-03
36GO:0019199: transmembrane receptor protein kinase activity2.45E-03
37GO:0009044: xylan 1,4-beta-xylosidase activity2.45E-03
38GO:0042277: peptide binding2.45E-03
39GO:0046556: alpha-L-arabinofuranosidase activity2.45E-03
40GO:0004659: prenyltransferase activity2.45E-03
41GO:0030570: pectate lyase activity2.69E-03
42GO:0004605: phosphatidate cytidylyltransferase activity3.88E-03
43GO:0042578: phosphoric ester hydrolase activity3.88E-03
44GO:0016788: hydrolase activity, acting on ester bonds4.41E-03
45GO:0004124: cysteine synthase activity4.67E-03
46GO:0003730: mRNA 3'-UTR binding4.67E-03
47GO:0004144: diacylglycerol O-acyltransferase activity4.67E-03
48GO:0004723: calcium-dependent protein serine/threonine phosphatase activity4.67E-03
49GO:0003872: 6-phosphofructokinase activity5.52E-03
50GO:0008237: metallopeptidase activity5.86E-03
51GO:0005525: GTP binding5.90E-03
52GO:0016597: amino acid binding6.21E-03
53GO:0043022: ribosome binding6.41E-03
54GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity7.36E-03
55GO:0005381: iron ion transmembrane transporter activity9.38E-03
56GO:0004675: transmembrane receptor protein serine/threonine kinase activity9.58E-03
57GO:0004713: protein tyrosine kinase activity1.05E-02
58GO:0004805: trehalose-phosphatase activity1.05E-02
59GO:0003924: GTPase activity1.08E-02
60GO:0008017: microtubule binding1.11E-02
61GO:0008559: xenobiotic-transporting ATPase activity1.16E-02
62GO:0004519: endonuclease activity1.22E-02
63GO:0000049: tRNA binding1.28E-02
64GO:0009982: pseudouridine synthase activity1.40E-02
65GO:0004565: beta-galactosidase activity1.40E-02
66GO:0004089: carbonate dehydratase activity1.40E-02
67GO:0042802: identical protein binding1.42E-02
68GO:0008083: growth factor activity1.52E-02
69GO:0042973: glucan endo-1,3-beta-D-glucosidase activity1.52E-02
70GO:0051537: 2 iron, 2 sulfur cluster binding1.53E-02
71GO:0102336: 3-oxo-arachidoyl-CoA synthase activity1.78E-02
72GO:0102337: 3-oxo-cerotoyl-CoA synthase activity1.78E-02
73GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity1.78E-02
74GO:0003899: DNA-directed 5'-3' RNA polymerase activity1.91E-02
75GO:0005528: FK506 binding1.92E-02
76GO:0003714: transcription corepressor activity1.92E-02
77GO:0051536: iron-sulfur cluster binding1.92E-02
78GO:0015079: potassium ion transmembrane transporter activity2.06E-02
79GO:0015171: amino acid transmembrane transporter activity2.11E-02
80GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity2.35E-02
81GO:0016760: cellulose synthase (UDP-forming) activity2.50E-02
82GO:0003727: single-stranded RNA binding2.65E-02
83GO:0052689: carboxylic ester hydrolase activity2.71E-02
84GO:0004812: aminoacyl-tRNA ligase activity2.81E-02
85GO:0008536: Ran GTPase binding3.13E-02
86GO:0010181: FMN binding3.30E-02
87GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen3.49E-02
88GO:0016829: lyase activity3.68E-02
89GO:0016757: transferase activity, transferring glycosyl groups3.85E-02
90GO:0051015: actin filament binding3.99E-02
91GO:0008565: protein transporter activity4.06E-02
92GO:0016791: phosphatase activity4.17E-02
93GO:0016759: cellulose synthase activity4.17E-02
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Gene type



Gene DE type