GO Enrichment Analysis of Co-expressed Genes with
AT3G28850
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006469: negative regulation of protein kinase activity | 0.00E+00 |
| 2 | GO:0010324: membrane invagination | 0.00E+00 |
| 3 | GO:0071327: cellular response to trehalose stimulus | 0.00E+00 |
| 4 | GO:0098755: maintenance of seed dormancy by absisic acid | 0.00E+00 |
| 5 | GO:1900367: positive regulation of defense response to insect | 0.00E+00 |
| 6 | GO:0006468: protein phosphorylation | 1.63E-09 |
| 7 | GO:0060548: negative regulation of cell death | 1.15E-07 |
| 8 | GO:0046777: protein autophosphorylation | 2.01E-07 |
| 9 | GO:0019725: cellular homeostasis | 1.59E-06 |
| 10 | GO:0031348: negative regulation of defense response | 1.59E-06 |
| 11 | GO:0009626: plant-type hypersensitive response | 1.27E-05 |
| 12 | GO:0000187: activation of MAPK activity | 1.35E-05 |
| 13 | GO:0018105: peptidyl-serine phosphorylation | 1.84E-05 |
| 14 | GO:0080142: regulation of salicylic acid biosynthetic process | 2.51E-05 |
| 15 | GO:0010225: response to UV-C | 4.05E-05 |
| 16 | GO:0035556: intracellular signal transduction | 5.81E-05 |
| 17 | GO:0007166: cell surface receptor signaling pathway | 8.16E-05 |
| 18 | GO:2000037: regulation of stomatal complex patterning | 8.36E-05 |
| 19 | GO:2000031: regulation of salicylic acid mediated signaling pathway | 1.78E-04 |
| 20 | GO:0006562: proline catabolic process | 1.82E-04 |
| 21 | GO:1901183: positive regulation of camalexin biosynthetic process | 1.82E-04 |
| 22 | GO:0009270: response to humidity | 1.82E-04 |
| 23 | GO:0050691: regulation of defense response to virus by host | 1.82E-04 |
| 24 | GO:0010365: positive regulation of ethylene biosynthetic process | 1.82E-04 |
| 25 | GO:0019567: arabinose biosynthetic process | 1.82E-04 |
| 26 | GO:0010421: hydrogen peroxide-mediated programmed cell death | 1.82E-04 |
| 27 | GO:0010200: response to chitin | 2.52E-04 |
| 28 | GO:0050688: regulation of defense response to virus | 4.10E-04 |
| 29 | GO:0002221: pattern recognition receptor signaling pathway | 4.10E-04 |
| 30 | GO:0080151: positive regulation of salicylic acid mediated signaling pathway | 4.10E-04 |
| 31 | GO:0010133: proline catabolic process to glutamate | 4.10E-04 |
| 32 | GO:0010618: aerenchyma formation | 4.10E-04 |
| 33 | GO:0010229: inflorescence development | 4.63E-04 |
| 34 | GO:0007034: vacuolar transport | 5.21E-04 |
| 35 | GO:0009266: response to temperature stimulus | 5.21E-04 |
| 36 | GO:0006470: protein dephosphorylation | 6.02E-04 |
| 37 | GO:0006952: defense response | 6.36E-04 |
| 38 | GO:0034051: negative regulation of plant-type hypersensitive response | 6.69E-04 |
| 39 | GO:1900140: regulation of seedling development | 6.69E-04 |
| 40 | GO:0045793: positive regulation of cell size | 6.69E-04 |
| 41 | GO:0010186: positive regulation of cellular defense response | 6.69E-04 |
| 42 | GO:0009814: defense response, incompatible interaction | 9.43E-04 |
| 43 | GO:0071456: cellular response to hypoxia | 9.43E-04 |
| 44 | GO:0002679: respiratory burst involved in defense response | 9.55E-04 |
| 45 | GO:0006537: glutamate biosynthetic process | 9.55E-04 |
| 46 | GO:0015696: ammonium transport | 9.55E-04 |
| 47 | GO:0071323: cellular response to chitin | 9.55E-04 |
| 48 | GO:0051289: protein homotetramerization | 9.55E-04 |
| 49 | GO:0048194: Golgi vesicle budding | 9.55E-04 |
| 50 | GO:0070301: cellular response to hydrogen peroxide | 9.55E-04 |
| 51 | GO:0072583: clathrin-dependent endocytosis | 9.55E-04 |
| 52 | GO:0010227: floral organ abscission | 1.02E-03 |
| 53 | GO:0042742: defense response to bacterium | 1.23E-03 |
| 54 | GO:0009738: abscisic acid-activated signaling pathway | 1.25E-03 |
| 55 | GO:1901002: positive regulation of response to salt stress | 1.27E-03 |
| 56 | GO:2000038: regulation of stomatal complex development | 1.27E-03 |
| 57 | GO:0045227: capsule polysaccharide biosynthetic process | 1.27E-03 |
| 58 | GO:1902584: positive regulation of response to water deprivation | 1.27E-03 |
| 59 | GO:0072488: ammonium transmembrane transport | 1.27E-03 |
| 60 | GO:0033358: UDP-L-arabinose biosynthetic process | 1.27E-03 |
| 61 | GO:0009697: salicylic acid biosynthetic process | 1.61E-03 |
| 62 | GO:0007165: signal transduction | 1.61E-03 |
| 63 | GO:0005513: detection of calcium ion | 1.61E-03 |
| 64 | GO:0045927: positive regulation of growth | 1.61E-03 |
| 65 | GO:0034052: positive regulation of plant-type hypersensitive response | 1.61E-03 |
| 66 | GO:1902456: regulation of stomatal opening | 1.98E-03 |
| 67 | GO:1900425: negative regulation of defense response to bacterium | 1.98E-03 |
| 68 | GO:0010942: positive regulation of cell death | 1.98E-03 |
| 69 | GO:0009751: response to salicylic acid | 2.32E-03 |
| 70 | GO:0009094: L-phenylalanine biosynthetic process | 2.38E-03 |
| 71 | GO:0042372: phylloquinone biosynthetic process | 2.38E-03 |
| 72 | GO:0045926: negative regulation of growth | 2.38E-03 |
| 73 | GO:0010310: regulation of hydrogen peroxide metabolic process | 2.38E-03 |
| 74 | GO:0034389: lipid particle organization | 2.38E-03 |
| 75 | GO:0001666: response to hypoxia | 2.46E-03 |
| 76 | GO:0010161: red light signaling pathway | 2.80E-03 |
| 77 | GO:0071446: cellular response to salicylic acid stimulus | 2.80E-03 |
| 78 | GO:0080186: developmental vegetative growth | 2.80E-03 |
| 79 | GO:0048573: photoperiodism, flowering | 2.89E-03 |
| 80 | GO:0035265: organ growth | 3.24E-03 |
| 81 | GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline | 3.24E-03 |
| 82 | GO:0010099: regulation of photomorphogenesis | 3.71E-03 |
| 83 | GO:0045087: innate immune response | 4.05E-03 |
| 84 | GO:0051865: protein autoubiquitination | 4.20E-03 |
| 85 | GO:0090333: regulation of stomatal closure | 4.20E-03 |
| 86 | GO:0009056: catabolic process | 4.20E-03 |
| 87 | GO:0046685: response to arsenic-containing substance | 4.20E-03 |
| 88 | GO:1900426: positive regulation of defense response to bacterium | 4.71E-03 |
| 89 | GO:0010205: photoinhibition | 4.71E-03 |
| 90 | GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway | 4.71E-03 |
| 91 | GO:0051707: response to other organism | 5.21E-03 |
| 92 | GO:0007064: mitotic sister chromatid cohesion | 5.24E-03 |
| 93 | GO:0000165: MAPK cascade | 6.31E-03 |
| 94 | GO:0031347: regulation of defense response | 6.31E-03 |
| 95 | GO:0010105: negative regulation of ethylene-activated signaling pathway | 6.35E-03 |
| 96 | GO:0006890: retrograde vesicle-mediated transport, Golgi to ER | 6.35E-03 |
| 97 | GO:0012501: programmed cell death | 6.35E-03 |
| 98 | GO:0002213: defense response to insect | 6.35E-03 |
| 99 | GO:0042538: hyperosmotic salinity response | 6.54E-03 |
| 100 | GO:0018107: peptidyl-threonine phosphorylation | 6.94E-03 |
| 101 | GO:0055046: microgametogenesis | 6.94E-03 |
| 102 | GO:0002237: response to molecule of bacterial origin | 7.55E-03 |
| 103 | GO:0070588: calcium ion transmembrane transport | 8.18E-03 |
| 104 | GO:0046854: phosphatidylinositol phosphorylation | 8.18E-03 |
| 105 | GO:0009225: nucleotide-sugar metabolic process | 8.18E-03 |
| 106 | GO:0080147: root hair cell development | 9.48E-03 |
| 107 | GO:0005992: trehalose biosynthetic process | 9.48E-03 |
| 108 | GO:0009116: nucleoside metabolic process | 9.48E-03 |
| 109 | GO:0009624: response to nematode | 1.00E-02 |
| 110 | GO:0009742: brassinosteroid mediated signaling pathway | 1.06E-02 |
| 111 | GO:0019915: lipid storage | 1.09E-02 |
| 112 | GO:0009408: response to heat | 1.11E-02 |
| 113 | GO:0016226: iron-sulfur cluster assembly | 1.16E-02 |
| 114 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 1.16E-02 |
| 115 | GO:0009625: response to insect | 1.23E-02 |
| 116 | GO:0006012: galactose metabolic process | 1.23E-02 |
| 117 | GO:0071215: cellular response to abscisic acid stimulus | 1.23E-02 |
| 118 | GO:0019722: calcium-mediated signaling | 1.31E-02 |
| 119 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 1.38E-02 |
| 120 | GO:0042147: retrograde transport, endosome to Golgi | 1.38E-02 |
| 121 | GO:0000271: polysaccharide biosynthetic process | 1.46E-02 |
| 122 | GO:0042631: cellular response to water deprivation | 1.46E-02 |
| 123 | GO:0009741: response to brassinosteroid | 1.54E-02 |
| 124 | GO:0045489: pectin biosynthetic process | 1.54E-02 |
| 125 | GO:0006979: response to oxidative stress | 1.66E-02 |
| 126 | GO:0010150: leaf senescence | 1.74E-02 |
| 127 | GO:0010193: response to ozone | 1.79E-02 |
| 128 | GO:0006891: intra-Golgi vesicle-mediated transport | 1.79E-02 |
| 129 | GO:0002229: defense response to oomycetes | 1.79E-02 |
| 130 | GO:0006464: cellular protein modification process | 2.05E-02 |
| 131 | GO:0019760: glucosinolate metabolic process | 2.05E-02 |
| 132 | GO:0010468: regulation of gene expression | 2.07E-02 |
| 133 | GO:0006904: vesicle docking involved in exocytosis | 2.14E-02 |
| 134 | GO:0051607: defense response to virus | 2.23E-02 |
| 135 | GO:0009911: positive regulation of flower development | 2.32E-02 |
| 136 | GO:0010029: regulation of seed germination | 2.42E-02 |
| 137 | GO:0009816: defense response to bacterium, incompatible interaction | 2.42E-02 |
| 138 | GO:0009788: negative regulation of abscisic acid-activated signaling pathway | 2.42E-02 |
| 139 | GO:0009627: systemic acquired resistance | 2.51E-02 |
| 140 | GO:0016049: cell growth | 2.71E-02 |
| 141 | GO:0008219: cell death | 2.81E-02 |
| 142 | GO:0006970: response to osmotic stress | 2.89E-02 |
| 143 | GO:0009832: plant-type cell wall biogenesis | 2.91E-02 |
| 144 | GO:0016051: carbohydrate biosynthetic process | 3.32E-02 |
| 145 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 3.44E-02 |
| 146 | GO:0030001: metal ion transport | 3.65E-02 |
| 147 | GO:0006887: exocytosis | 3.76E-02 |
| 148 | GO:0006897: endocytosis | 3.76E-02 |
| 149 | GO:0042542: response to hydrogen peroxide | 3.87E-02 |
| 150 | GO:0045892: negative regulation of transcription, DNA-templated | 4.04E-02 |
| 151 | GO:0000209: protein polyubiquitination | 4.09E-02 |
| 152 | GO:0006855: drug transmembrane transport | 4.44E-02 |
| 153 | GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process | 4.56E-02 |
| 154 | GO:0006629: lipid metabolic process | 4.89E-02 |
| 155 | GO:0009737: response to abscisic acid | 4.97E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016301: kinase activity | 1.90E-12 |
| 2 | GO:0005524: ATP binding | 1.62E-08 |
| 3 | GO:0004674: protein serine/threonine kinase activity | 1.72E-07 |
| 4 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 1.76E-05 |
| 5 | GO:0004683: calmodulin-dependent protein kinase activity | 1.96E-05 |
| 6 | GO:0005515: protein binding | 3.49E-05 |
| 7 | GO:0004672: protein kinase activity | 3.87E-05 |
| 8 | GO:0005509: calcium ion binding | 4.92E-05 |
| 9 | GO:0004708: MAP kinase kinase activity | 1.43E-04 |
| 10 | GO:0004657: proline dehydrogenase activity | 1.82E-04 |
| 11 | GO:0015398: high-affinity secondary active ammonium transmembrane transporter activity | 1.82E-04 |
| 12 | GO:0032050: clathrin heavy chain binding | 1.82E-04 |
| 13 | GO:0015085: calcium ion transmembrane transporter activity | 1.82E-04 |
| 14 | GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity | 2.10E-04 |
| 15 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 4.39E-04 |
| 16 | GO:0033612: receptor serine/threonine kinase binding | 8.65E-04 |
| 17 | GO:0050373: UDP-arabinose 4-epimerase activity | 1.27E-03 |
| 18 | GO:0047769: arogenate dehydratase activity | 1.27E-03 |
| 19 | GO:0004664: prephenate dehydratase activity | 1.27E-03 |
| 20 | GO:0070696: transmembrane receptor protein serine/threonine kinase binding | 1.61E-03 |
| 21 | GO:0008519: ammonium transmembrane transporter activity | 1.98E-03 |
| 22 | GO:0004722: protein serine/threonine phosphatase activity | 1.98E-03 |
| 23 | GO:0003978: UDP-glucose 4-epimerase activity | 2.38E-03 |
| 24 | GO:0004656: procollagen-proline 4-dioxygenase activity | 2.38E-03 |
| 25 | GO:0004012: phospholipid-translocating ATPase activity | 2.38E-03 |
| 26 | GO:0005516: calmodulin binding | 2.73E-03 |
| 27 | GO:0102425: myricetin 3-O-glucosyltransferase activity | 2.80E-03 |
| 28 | GO:0102360: daphnetin 3-O-glucosyltransferase activity | 2.80E-03 |
| 29 | GO:0004806: triglyceride lipase activity | 2.89E-03 |
| 30 | GO:0005544: calcium-dependent phospholipid binding | 3.24E-03 |
| 31 | GO:0047893: flavonol 3-O-glucosyltransferase activity | 3.24E-03 |
| 32 | GO:0004714: transmembrane receptor protein tyrosine kinase activity | 3.24E-03 |
| 33 | GO:0004430: 1-phosphatidylinositol 4-kinase activity | 3.71E-03 |
| 34 | GO:0047617: acyl-CoA hydrolase activity | 4.71E-03 |
| 35 | GO:0004805: trehalose-phosphatase activity | 5.24E-03 |
| 36 | GO:0005543: phospholipid binding | 5.79E-03 |
| 37 | GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | 6.94E-03 |
| 38 | GO:0005388: calcium-transporting ATPase activity | 6.94E-03 |
| 39 | GO:0004842: ubiquitin-protein transferase activity | 8.07E-03 |
| 40 | GO:0008061: chitin binding | 8.18E-03 |
| 41 | GO:0004190: aspartic-type endopeptidase activity | 8.18E-03 |
| 42 | GO:0035251: UDP-glucosyltransferase activity | 1.09E-02 |
| 43 | GO:0004707: MAP kinase activity | 1.09E-02 |
| 44 | GO:0003924: GTPase activity | 1.11E-02 |
| 45 | GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity | 1.16E-02 |
| 46 | GO:0016758: transferase activity, transferring hexosyl groups | 1.22E-02 |
| 47 | GO:0004197: cysteine-type endopeptidase activity | 1.87E-02 |
| 48 | GO:0042802: identical protein binding | 2.21E-02 |
| 49 | GO:0016597: amino acid binding | 2.23E-02 |
| 50 | GO:0030247: polysaccharide binding | 2.61E-02 |
| 51 | GO:0004721: phosphoprotein phosphatase activity | 2.61E-02 |
| 52 | GO:0015238: drug transmembrane transporter activity | 2.91E-02 |
| 53 | GO:0043565: sequence-specific DNA binding | 2.94E-02 |
| 54 | GO:0043531: ADP binding | 2.95E-02 |
| 55 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 3.32E-02 |
| 56 | GO:0003746: translation elongation factor activity | 3.32E-02 |
| 57 | GO:0030246: carbohydrate binding | 3.33E-02 |
| 58 | GO:0042803: protein homodimerization activity | 4.17E-02 |
| 59 | GO:0051537: 2 iron, 2 sulfur cluster binding | 4.21E-02 |
| 60 | GO:0005525: GTP binding | 4.26E-02 |
| 61 | GO:0005198: structural molecule activity | 4.32E-02 |