Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G28510

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0042430: indole-containing compound metabolic process0.00E+00
2GO:0034756: regulation of iron ion transport0.00E+00
3GO:0007142: male meiosis II0.00E+00
4GO:0006952: defense response2.04E-05
5GO:0006874: cellular calcium ion homeostasis7.99E-05
6GO:0007165: signal transduction1.10E-04
7GO:0009617: response to bacterium2.04E-04
8GO:0010421: hydrogen peroxide-mediated programmed cell death2.41E-04
9GO:0010230: alternative respiration2.41E-04
10GO:0046244: salicylic acid catabolic process2.41E-04
11GO:0010120: camalexin biosynthetic process2.70E-04
12GO:0009620: response to fungus3.37E-04
13GO:0009870: defense response signaling pathway, resistance gene-dependent4.55E-04
14GO:0008535: respiratory chain complex IV assembly5.34E-04
15GO:0080183: response to photooxidative stress5.34E-04
16GO:0009805: coumarin biosynthetic process5.34E-04
17GO:0006695: cholesterol biosynthetic process5.34E-04
18GO:0006672: ceramide metabolic process5.34E-04
19GO:0045732: positive regulation of protein catabolic process5.34E-04
20GO:0061158: 3'-UTR-mediated mRNA destabilization8.68E-04
21GO:2000082: regulation of L-ascorbic acid biosynthetic process8.68E-04
22GO:0006487: protein N-linked glycosylation1.05E-03
23GO:0006882: cellular zinc ion homeostasis1.24E-03
24GO:0002239: response to oomycetes1.24E-03
25GO:0010971: positive regulation of G2/M transition of mitotic cell cycle1.24E-03
26GO:0019748: secondary metabolic process1.38E-03
27GO:0071369: cellular response to ethylene stimulus1.51E-03
28GO:0045227: capsule polysaccharide biosynthetic process1.65E-03
29GO:0010483: pollen tube reception1.65E-03
30GO:0010387: COP9 signalosome assembly1.65E-03
31GO:0006536: glutamate metabolic process1.65E-03
32GO:0033358: UDP-L-arabinose biosynthetic process1.65E-03
33GO:0000919: cell plate assembly1.65E-03
34GO:0018279: protein N-linked glycosylation via asparagine2.11E-03
35GO:0016926: protein desumoylation2.11E-03
36GO:0006544: glycine metabolic process2.11E-03
37GO:0048579: negative regulation of long-day photoperiodism, flowering2.60E-03
38GO:0006561: proline biosynthetic process2.60E-03
39GO:0006563: L-serine metabolic process2.60E-03
40GO:0050832: defense response to fungus3.00E-03
41GO:0009612: response to mechanical stimulus3.12E-03
42GO:0010189: vitamin E biosynthetic process3.12E-03
43GO:0010044: response to aluminum ion3.68E-03
44GO:0048528: post-embryonic root development3.68E-03
45GO:1900056: negative regulation of leaf senescence3.68E-03
46GO:0000338: protein deneddylation3.68E-03
47GO:0050829: defense response to Gram-negative bacterium3.68E-03
48GO:0009627: systemic acquired resistance4.08E-03
49GO:0006102: isocitrate metabolic process4.27E-03
50GO:0009819: drought recovery4.27E-03
51GO:0008219: cell death4.77E-03
52GO:0009817: defense response to fungus, incompatible interaction4.77E-03
53GO:0010100: negative regulation of photomorphogenesis4.89E-03
54GO:0010204: defense response signaling pathway, resistance gene-independent4.89E-03
55GO:0009699: phenylpropanoid biosynthetic process4.89E-03
56GO:0007186: G-protein coupled receptor signaling pathway4.89E-03
57GO:0010150: leaf senescence4.94E-03
58GO:0006499: N-terminal protein myristoylation5.26E-03
59GO:0008202: steroid metabolic process6.21E-03
60GO:0071577: zinc II ion transmembrane transport6.21E-03
61GO:0043067: regulation of programmed cell death6.21E-03
62GO:0035999: tetrahydrofolate interconversion6.21E-03
63GO:0009682: induced systemic resistance7.65E-03
64GO:0006790: sulfur compound metabolic process8.41E-03
65GO:0009718: anthocyanin-containing compound biosynthetic process9.20E-03
66GO:0042742: defense response to bacterium9.32E-03
67GO:0009809: lignin biosynthetic process1.05E-02
68GO:0010039: response to iron ion1.09E-02
69GO:0071732: cellular response to nitric oxide1.09E-02
70GO:0046854: phosphatidylinositol phosphorylation1.09E-02
71GO:0009225: nucleotide-sugar metabolic process1.09E-02
72GO:0043086: negative regulation of catalytic activity1.25E-02
73GO:0005992: trehalose biosynthetic process1.26E-02
74GO:0000027: ribosomal large subunit assembly1.26E-02
75GO:0009626: plant-type hypersensitive response1.33E-02
76GO:0031348: negative regulation of defense response1.54E-02
77GO:0071456: cellular response to hypoxia1.54E-02
78GO:0006012: galactose metabolic process1.64E-02
79GO:0006284: base-excision repair1.74E-02
80GO:0009561: megagametogenesis1.74E-02
81GO:0051028: mRNA transport1.84E-02
82GO:0008284: positive regulation of cell proliferation1.84E-02
83GO:0000413: protein peptidyl-prolyl isomerization1.95E-02
84GO:0006885: regulation of pH2.05E-02
85GO:0010197: polar nucleus fusion2.05E-02
86GO:0048868: pollen tube development2.05E-02
87GO:0071472: cellular response to salt stress2.05E-02
88GO:0009556: microsporogenesis2.27E-02
89GO:0006623: protein targeting to vacuole2.27E-02
90GO:0016132: brassinosteroid biosynthetic process2.38E-02
91GO:0002229: defense response to oomycetes2.38E-02
92GO:0071281: cellular response to iron ion2.62E-02
93GO:0006904: vesicle docking involved in exocytosis2.85E-02
94GO:0051607: defense response to virus2.98E-02
95GO:0016579: protein deubiquitination2.98E-02
96GO:0016126: sterol biosynthetic process3.10E-02
97GO:0009607: response to biotic stimulus3.23E-02
98GO:0006950: response to stress3.48E-02
99GO:0009416: response to light stimulus3.80E-02
100GO:0009407: toxin catabolic process4.01E-02
101GO:0016310: phosphorylation4.25E-02
102GO:0009867: jasmonic acid mediated signaling pathway4.43E-02
103GO:0045087: innate immune response4.43E-02
104GO:0006099: tricarboxylic acid cycle4.57E-02
105GO:0055114: oxidation-reduction process4.65E-02
106GO:0030001: metal ion transport4.86E-02
RankGO TermAdjusted P value
1GO:0001729: ceramide kinase activity0.00E+00
2GO:0047598: 7-dehydrocholesterol reductase activity0.00E+00
3GO:0047720: indoleacetaldoxime dehydratase activity0.00E+00
4GO:0009918: sterol delta7 reductase activity0.00E+00
5GO:0004970: ionotropic glutamate receptor activity4.89E-05
6GO:0005217: intracellular ligand-gated ion channel activity4.89E-05
7GO:0015157: oligosaccharide transmembrane transporter activity2.41E-04
8GO:0000386: second spliceosomal transesterification activity2.41E-04
9GO:0030246: carbohydrate binding3.13E-04
10GO:0016301: kinase activity3.18E-04
11GO:0004566: beta-glucuronidase activity5.34E-04
12GO:0052640: salicylic acid glucosyltransferase (glucoside-forming) activity5.34E-04
13GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity8.68E-04
14GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity1.24E-03
15GO:0004351: glutamate decarboxylase activity1.24E-03
16GO:0004449: isocitrate dehydrogenase (NAD+) activity1.24E-03
17GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor1.24E-03
18GO:0003727: single-stranded RNA binding1.63E-03
19GO:0046527: glucosyltransferase activity1.65E-03
20GO:0004576: oligosaccharyl transferase activity1.65E-03
21GO:0009916: alternative oxidase activity1.65E-03
22GO:0050373: UDP-arabinose 4-epimerase activity1.65E-03
23GO:0004930: G-protein coupled receptor activity1.65E-03
24GO:0004372: glycine hydroxymethyltransferase activity2.11E-03
25GO:0016929: SUMO-specific protease activity2.11E-03
26GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity2.11E-03
27GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity3.12E-03
28GO:0003978: UDP-glucose 4-epimerase activity3.12E-03
29GO:0051213: dioxygenase activity3.66E-03
30GO:0016621: cinnamoyl-CoA reductase activity3.68E-03
31GO:0004714: transmembrane receptor protein tyrosine kinase activity4.27E-03
32GO:0030247: polysaccharide binding4.31E-03
33GO:0046910: pectinesterase inhibitor activity4.52E-03
34GO:0003951: NAD+ kinase activity4.89E-03
35GO:0008142: oxysterol binding4.89E-03
36GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors5.54E-03
37GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors6.04E-03
38GO:0030955: potassium ion binding6.21E-03
39GO:0004743: pyruvate kinase activity6.21E-03
40GO:0005089: Rho guanyl-nucleotide exchange factor activity7.65E-03
41GO:0008559: xenobiotic-transporting ATPase activity7.65E-03
42GO:0045551: cinnamyl-alcohol dehydrogenase activity8.41E-03
43GO:0004022: alcohol dehydrogenase (NAD) activity9.20E-03
44GO:0043531: ADP binding9.69E-03
45GO:0004497: monooxygenase activity1.13E-02
46GO:0008134: transcription factor binding1.26E-02
47GO:0005385: zinc ion transmembrane transporter activity1.26E-02
48GO:0036459: thiol-dependent ubiquitinyl hydrolase activity1.45E-02
49GO:0015035: protein disulfide oxidoreductase activity1.55E-02
50GO:0004722: protein serine/threonine phosphatase activity1.60E-02
51GO:0008810: cellulase activity1.64E-02
52GO:0004499: N,N-dimethylaniline monooxygenase activity1.74E-02
53GO:0005516: calmodulin binding1.93E-02
54GO:0005451: monovalent cation:proton antiporter activity1.95E-02
55GO:0046873: metal ion transmembrane transporter activity2.05E-02
56GO:0030170: pyridoxal phosphate binding2.09E-02
57GO:0050662: coenzyme binding2.16E-02
58GO:0015299: solute:proton antiporter activity2.16E-02
59GO:0004872: receptor activity2.27E-02
60GO:0004843: thiol-dependent ubiquitin-specific protease activity2.38E-02
61GO:0015385: sodium:proton antiporter activity2.62E-02
62GO:0008237: metallopeptidase activity2.85E-02
63GO:0042626: ATPase activity, coupled to transmembrane movement of substances3.30E-02
64GO:0008375: acetylglucosaminyltransferase activity3.35E-02
65GO:0003824: catalytic activity3.43E-02
66GO:0000166: nucleotide binding3.80E-02
67GO:0005096: GTPase activator activity3.88E-02
68GO:0030145: manganese ion binding4.15E-02
69GO:0003993: acid phosphatase activity4.57E-02
70GO:0016740: transferase activity4.84E-02
71GO:0050661: NADP binding4.86E-02
72GO:0051539: 4 iron, 4 sulfur cluster binding4.86E-02
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Gene type



Gene DE type





AT3G20250