GO Enrichment Analysis of Co-expressed Genes with
AT3G28480
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0072722: response to amitrole | 0.00E+00 |
| 2 | GO:0010055: atrichoblast differentiation | 0.00E+00 |
| 3 | GO:0006654: phosphatidic acid biosynthetic process | 0.00E+00 |
| 4 | GO:0090480: purine nucleotide-sugar transmembrane transport | 0.00E+00 |
| 5 | GO:0043620: regulation of DNA-templated transcription in response to stress | 0.00E+00 |
| 6 | GO:0002084: protein depalmitoylation | 0.00E+00 |
| 7 | GO:0046865: terpenoid transport | 0.00E+00 |
| 8 | GO:0034756: regulation of iron ion transport | 0.00E+00 |
| 9 | GO:0051252: regulation of RNA metabolic process | 5.92E-06 |
| 10 | GO:0009814: defense response, incompatible interaction | 1.35E-05 |
| 11 | GO:0051707: response to other organism | 3.82E-05 |
| 12 | GO:0009627: systemic acquired resistance | 1.18E-04 |
| 13 | GO:0071446: cellular response to salicylic acid stimulus | 3.19E-04 |
| 14 | GO:0032107: regulation of response to nutrient levels | 3.63E-04 |
| 15 | GO:0031123: RNA 3'-end processing | 3.63E-04 |
| 16 | GO:0071076: RNA 3' uridylation | 3.63E-04 |
| 17 | GO:0099132: ATP hydrolysis coupled cation transmembrane transport | 3.63E-04 |
| 18 | GO:0009700: indole phytoalexin biosynthetic process | 3.63E-04 |
| 19 | GO:0010230: alternative respiration | 3.63E-04 |
| 20 | GO:0098789: pre-mRNA cleavage required for polyadenylation | 3.63E-04 |
| 21 | GO:0042868: antisense RNA metabolic process | 3.63E-04 |
| 22 | GO:1900150: regulation of defense response to fungus | 4.01E-04 |
| 23 | GO:0006623: protein targeting to vacuole | 5.10E-04 |
| 24 | GO:0015780: nucleotide-sugar transport | 5.89E-04 |
| 25 | GO:0006996: organelle organization | 7.89E-04 |
| 26 | GO:0009156: ribonucleoside monophosphate biosynthetic process | 7.89E-04 |
| 27 | GO:0046939: nucleotide phosphorylation | 7.89E-04 |
| 28 | GO:0080151: positive regulation of salicylic acid mediated signaling pathway | 7.89E-04 |
| 29 | GO:1902066: regulation of cell wall pectin metabolic process | 7.89E-04 |
| 30 | GO:0042853: L-alanine catabolic process | 7.89E-04 |
| 31 | GO:0008535: respiratory chain complex IV assembly | 7.89E-04 |
| 32 | GO:0051607: defense response to virus | 8.27E-04 |
| 33 | GO:0009816: defense response to bacterium, incompatible interaction | 9.51E-04 |
| 34 | GO:0045836: positive regulation of meiotic nuclear division | 1.28E-03 |
| 35 | GO:0015783: GDP-fucose transport | 1.28E-03 |
| 36 | GO:0006517: protein deglycosylation | 1.28E-03 |
| 37 | GO:2001009: regulation of plant-type cell wall cellulose biosynthetic process | 1.28E-03 |
| 38 | GO:0010272: response to silver ion | 1.28E-03 |
| 39 | GO:0015692: lead ion transport | 1.28E-03 |
| 40 | GO:0060968: regulation of gene silencing | 1.28E-03 |
| 41 | GO:0080168: abscisic acid transport | 1.28E-03 |
| 42 | GO:0048586: regulation of long-day photoperiodism, flowering | 1.28E-03 |
| 43 | GO:0032922: circadian regulation of gene expression | 1.28E-03 |
| 44 | GO:1901672: positive regulation of systemic acquired resistance | 1.28E-03 |
| 45 | GO:0061158: 3'-UTR-mediated mRNA destabilization | 1.28E-03 |
| 46 | GO:0017006: protein-tetrapyrrole linkage | 1.28E-03 |
| 47 | GO:0042343: indole glucosinolate metabolic process | 1.52E-03 |
| 48 | GO:1902290: positive regulation of defense response to oomycetes | 1.84E-03 |
| 49 | GO:0006515: misfolded or incompletely synthesized protein catabolic process | 1.84E-03 |
| 50 | GO:0032877: positive regulation of DNA endoreduplication | 1.84E-03 |
| 51 | GO:0055089: fatty acid homeostasis | 1.84E-03 |
| 52 | GO:0000187: activation of MAPK activity | 1.84E-03 |
| 53 | GO:0060964: regulation of gene silencing by miRNA | 1.84E-03 |
| 54 | GO:0009584: detection of visible light | 1.84E-03 |
| 55 | GO:0072334: UDP-galactose transmembrane transport | 1.84E-03 |
| 56 | GO:0010104: regulation of ethylene-activated signaling pathway | 1.84E-03 |
| 57 | GO:0010731: protein glutathionylation | 1.84E-03 |
| 58 | GO:0006516: glycoprotein catabolic process | 1.84E-03 |
| 59 | GO:0002679: respiratory burst involved in defense response | 1.84E-03 |
| 60 | GO:0098542: defense response to other organism | 2.27E-03 |
| 61 | GO:0009165: nucleotide biosynthetic process | 2.47E-03 |
| 62 | GO:0033320: UDP-D-xylose biosynthetic process | 2.47E-03 |
| 63 | GO:0010363: regulation of plant-type hypersensitive response | 2.47E-03 |
| 64 | GO:0010188: response to microbial phytotoxin | 2.47E-03 |
| 65 | GO:0071456: cellular response to hypoxia | 2.49E-03 |
| 66 | GO:0009636: response to toxic substance | 2.67E-03 |
| 67 | GO:0042742: defense response to bacterium | 2.98E-03 |
| 68 | GO:0009435: NAD biosynthetic process | 3.16E-03 |
| 69 | GO:0045927: positive regulation of growth | 3.16E-03 |
| 70 | GO:0098719: sodium ion import across plasma membrane | 3.16E-03 |
| 71 | GO:0042732: D-xylose metabolic process | 3.91E-03 |
| 72 | GO:0045736: negative regulation of cyclin-dependent protein serine/threonine kinase activity | 3.91E-03 |
| 73 | GO:0042176: regulation of protein catabolic process | 3.91E-03 |
| 74 | GO:0060918: auxin transport | 3.91E-03 |
| 75 | GO:0045040: protein import into mitochondrial outer membrane | 3.91E-03 |
| 76 | GO:0006139: nucleobase-containing compound metabolic process | 3.91E-03 |
| 77 | GO:0009626: plant-type hypersensitive response | 4.52E-03 |
| 78 | GO:0010193: response to ozone | 4.60E-03 |
| 79 | GO:0007050: cell cycle arrest | 5.56E-03 |
| 80 | GO:1900056: negative regulation of leaf senescence | 5.56E-03 |
| 81 | GO:0080186: developmental vegetative growth | 5.56E-03 |
| 82 | GO:2000014: regulation of endosperm development | 5.56E-03 |
| 83 | GO:0000122: negative regulation of transcription from RNA polymerase II promoter | 5.56E-03 |
| 84 | GO:0050821: protein stabilization | 6.46E-03 |
| 85 | GO:0009819: drought recovery | 6.46E-03 |
| 86 | GO:0009615: response to virus | 6.65E-03 |
| 87 | GO:2000031: regulation of salicylic acid mediated signaling pathway | 7.41E-03 |
| 88 | GO:0006002: fructose 6-phosphate metabolic process | 7.41E-03 |
| 89 | GO:0010120: camalexin biosynthetic process | 7.41E-03 |
| 90 | GO:0010112: regulation of systemic acquired resistance | 8.41E-03 |
| 91 | GO:0048589: developmental growth | 8.41E-03 |
| 92 | GO:0008219: cell death | 8.69E-03 |
| 93 | GO:0008202: steroid metabolic process | 9.46E-03 |
| 94 | GO:0051453: regulation of intracellular pH | 9.46E-03 |
| 95 | GO:1900426: positive regulation of defense response to bacterium | 9.46E-03 |
| 96 | GO:0043067: regulation of programmed cell death | 9.46E-03 |
| 97 | GO:0090332: stomatal closure | 9.46E-03 |
| 98 | GO:0048268: clathrin coat assembly | 9.46E-03 |
| 99 | GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway | 9.46E-03 |
| 100 | GO:0009407: toxin catabolic process | 9.60E-03 |
| 101 | GO:0010043: response to zinc ion | 1.01E-02 |
| 102 | GO:0009631: cold acclimation | 1.01E-02 |
| 103 | GO:0043069: negative regulation of programmed cell death | 1.05E-02 |
| 104 | GO:0000103: sulfate assimilation | 1.05E-02 |
| 105 | GO:0006032: chitin catabolic process | 1.05E-02 |
| 106 | GO:0010150: leaf senescence | 1.06E-02 |
| 107 | GO:0000724: double-strand break repair via homologous recombination | 1.06E-02 |
| 108 | GO:0009751: response to salicylic acid | 1.07E-02 |
| 109 | GO:0000272: polysaccharide catabolic process | 1.17E-02 |
| 110 | GO:0009089: lysine biosynthetic process via diaminopimelate | 1.17E-02 |
| 111 | GO:0016925: protein sumoylation | 1.29E-02 |
| 112 | GO:0006890: retrograde vesicle-mediated transport, Golgi to ER | 1.29E-02 |
| 113 | GO:0006790: sulfur compound metabolic process | 1.29E-02 |
| 114 | GO:0006631: fatty acid metabolic process | 1.31E-02 |
| 115 | GO:0009617: response to bacterium | 1.33E-02 |
| 116 | GO:2000028: regulation of photoperiodism, flowering | 1.41E-02 |
| 117 | GO:0050826: response to freezing | 1.41E-02 |
| 118 | GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process | 1.41E-02 |
| 119 | GO:0010102: lateral root morphogenesis | 1.41E-02 |
| 120 | GO:0006626: protein targeting to mitochondrion | 1.41E-02 |
| 121 | GO:0006541: glutamine metabolic process | 1.53E-02 |
| 122 | GO:0002237: response to molecule of bacterial origin | 1.53E-02 |
| 123 | GO:0007034: vacuolar transport | 1.53E-02 |
| 124 | GO:0008643: carbohydrate transport | 1.55E-02 |
| 125 | GO:0070588: calcium ion transmembrane transport | 1.66E-02 |
| 126 | GO:0046854: phosphatidylinositol phosphorylation | 1.66E-02 |
| 127 | GO:0010053: root epidermal cell differentiation | 1.66E-02 |
| 128 | GO:0009225: nucleotide-sugar metabolic process | 1.66E-02 |
| 129 | GO:0007030: Golgi organization | 1.66E-02 |
| 130 | GO:0010039: response to iron ion | 1.66E-02 |
| 131 | GO:0071732: cellular response to nitric oxide | 1.66E-02 |
| 132 | GO:0006855: drug transmembrane transport | 1.67E-02 |
| 133 | GO:0000165: MAPK cascade | 1.73E-02 |
| 134 | GO:0034976: response to endoplasmic reticulum stress | 1.80E-02 |
| 135 | GO:0006636: unsaturated fatty acid biosynthetic process | 1.80E-02 |
| 136 | GO:0006289: nucleotide-excision repair | 1.93E-02 |
| 137 | GO:0009116: nucleoside metabolic process | 1.93E-02 |
| 138 | GO:0016310: phosphorylation | 2.03E-02 |
| 139 | GO:0016998: cell wall macromolecule catabolic process | 2.22E-02 |
| 140 | GO:0006334: nucleosome assembly | 2.22E-02 |
| 141 | GO:0048278: vesicle docking | 2.22E-02 |
| 142 | GO:0031408: oxylipin biosynthetic process | 2.22E-02 |
| 143 | GO:0051321: meiotic cell cycle | 2.22E-02 |
| 144 | GO:0006952: defense response | 2.32E-02 |
| 145 | GO:0010017: red or far-red light signaling pathway | 2.37E-02 |
| 146 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 2.37E-02 |
| 147 | GO:0030433: ubiquitin-dependent ERAD pathway | 2.37E-02 |
| 148 | GO:0071369: cellular response to ethylene stimulus | 2.52E-02 |
| 149 | GO:0009625: response to insect | 2.52E-02 |
| 150 | GO:0010227: floral organ abscission | 2.52E-02 |
| 151 | GO:0006012: galactose metabolic process | 2.52E-02 |
| 152 | GO:0009306: protein secretion | 2.67E-02 |
| 153 | GO:0042147: retrograde transport, endosome to Golgi | 2.83E-02 |
| 154 | GO:0034220: ion transmembrane transport | 2.99E-02 |
| 155 | GO:0010051: xylem and phloem pattern formation | 2.99E-02 |
| 156 | GO:0009960: endosperm development | 3.16E-02 |
| 157 | GO:0006662: glycerol ether metabolic process | 3.16E-02 |
| 158 | GO:0061025: membrane fusion | 3.32E-02 |
| 159 | GO:0006814: sodium ion transport | 3.32E-02 |
| 160 | GO:0009058: biosynthetic process | 3.62E-02 |
| 161 | GO:0007165: signal transduction | 3.63E-02 |
| 162 | GO:0002229: defense response to oomycetes | 3.67E-02 |
| 163 | GO:0000302: response to reactive oxygen species | 3.67E-02 |
| 164 | GO:0006891: intra-Golgi vesicle-mediated transport | 3.67E-02 |
| 165 | GO:0031047: gene silencing by RNA | 3.84E-02 |
| 166 | GO:0016032: viral process | 3.84E-02 |
| 167 | GO:0015031: protein transport | 3.90E-02 |
| 168 | GO:0006629: lipid metabolic process | 3.94E-02 |
| 169 | GO:0030163: protein catabolic process | 4.02E-02 |
| 170 | GO:0071281: cellular response to iron ion | 4.02E-02 |
| 171 | GO:0006511: ubiquitin-dependent protein catabolic process | 4.03E-02 |
| 172 | GO:0071805: potassium ion transmembrane transport | 4.39E-02 |
| 173 | GO:0000910: cytokinesis | 4.57E-02 |
| 174 | GO:0016579: protein deubiquitination | 4.57E-02 |
| 175 | GO:0001666: response to hypoxia | 4.76E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0034338: short-chain carboxylesterase activity | 0.00E+00 |
| 2 | GO:0019205: nucleobase-containing compound kinase activity | 0.00E+00 |
| 3 | GO:0044318: L-aspartate:fumarate oxidoreductase activity | 0.00E+00 |
| 4 | GO:0055105: ubiquitin-protein transferase inhibitor activity | 0.00E+00 |
| 5 | GO:0008734: L-aspartate oxidase activity | 0.00E+00 |
| 6 | GO:0051670: inulinase activity | 0.00E+00 |
| 7 | GO:0000224: peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity | 0.00E+00 |
| 8 | GO:0010298: dihydrocamalexic acid decarboxylase activity | 0.00E+00 |
| 9 | GO:0047443: 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity | 5.92E-06 |
| 10 | GO:0008428: ribonuclease inhibitor activity | 5.92E-06 |
| 11 | GO:0008948: oxaloacetate decarboxylase activity | 1.27E-04 |
| 12 | GO:0010285: L,L-diaminopimelate aminotransferase activity | 3.63E-04 |
| 13 | GO:0050265: RNA uridylyltransferase activity | 3.63E-04 |
| 14 | GO:0051669: fructan beta-fructosidase activity | 3.63E-04 |
| 15 | GO:0031219: levanase activity | 3.63E-04 |
| 16 | GO:0004708: MAP kinase kinase activity | 4.01E-04 |
| 17 | GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity | 7.68E-04 |
| 18 | GO:0004566: beta-glucuronidase activity | 7.89E-04 |
| 19 | GO:0009883: red or far-red light photoreceptor activity | 7.89E-04 |
| 20 | GO:0051879: Hsp90 protein binding | 7.89E-04 |
| 21 | GO:0008805: carbon-monoxide oxygenase activity | 7.89E-04 |
| 22 | GO:0004338: glucan exo-1,3-beta-glucosidase activity | 7.89E-04 |
| 23 | GO:0004568: chitinase activity | 8.10E-04 |
| 24 | GO:0005457: GDP-fucose transmembrane transporter activity | 1.28E-03 |
| 25 | GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity | 1.28E-03 |
| 26 | GO:0008020: G-protein coupled photoreceptor activity | 1.28E-03 |
| 27 | GO:0004867: serine-type endopeptidase inhibitor activity | 1.52E-03 |
| 28 | GO:0004749: ribose phosphate diphosphokinase activity | 1.84E-03 |
| 29 | GO:0019201: nucleotide kinase activity | 1.84E-03 |
| 30 | GO:0035529: NADH pyrophosphatase activity | 1.84E-03 |
| 31 | GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity | 1.84E-03 |
| 32 | GO:0009916: alternative oxidase activity | 2.47E-03 |
| 33 | GO:0031386: protein tag | 3.16E-03 |
| 34 | GO:0047631: ADP-ribose diphosphatase activity | 3.16E-03 |
| 35 | GO:0005459: UDP-galactose transmembrane transporter activity | 3.16E-03 |
| 36 | GO:0045300: acyl-[acyl-carrier-protein] desaturase activity | 3.16E-03 |
| 37 | GO:0004623: phospholipase A2 activity | 3.16E-03 |
| 38 | GO:0048040: UDP-glucuronate decarboxylase activity | 3.91E-03 |
| 39 | GO:0008474: palmitoyl-(protein) hydrolase activity | 3.91E-03 |
| 40 | GO:0004861: cyclin-dependent protein serine/threonine kinase inhibitor activity | 3.91E-03 |
| 41 | GO:0047714: galactolipase activity | 3.91E-03 |
| 42 | GO:0000210: NAD+ diphosphatase activity | 3.91E-03 |
| 43 | GO:0035252: UDP-xylosyltransferase activity | 3.91E-03 |
| 44 | GO:0070403: NAD+ binding | 4.71E-03 |
| 45 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 4.71E-03 |
| 46 | GO:0004017: adenylate kinase activity | 4.71E-03 |
| 47 | GO:0004620: phospholipase activity | 5.56E-03 |
| 48 | GO:0005338: nucleotide-sugar transmembrane transporter activity | 5.56E-03 |
| 49 | GO:0102425: myricetin 3-O-glucosyltransferase activity | 5.56E-03 |
| 50 | GO:0102360: daphnetin 3-O-glucosyltransferase activity | 5.56E-03 |
| 51 | GO:0016621: cinnamoyl-CoA reductase activity | 5.56E-03 |
| 52 | GO:0009881: photoreceptor activity | 5.56E-03 |
| 53 | GO:0003872: 6-phosphofructokinase activity | 5.56E-03 |
| 54 | GO:0004034: aldose 1-epimerase activity | 6.46E-03 |
| 55 | GO:0047893: flavonol 3-O-glucosyltransferase activity | 6.46E-03 |
| 56 | GO:0004525: ribonuclease III activity | 6.46E-03 |
| 57 | GO:0016301: kinase activity | 6.81E-03 |
| 58 | GO:0008142: oxysterol binding | 7.41E-03 |
| 59 | GO:0008970: phosphatidylcholine 1-acylhydrolase activity | 7.41E-03 |
| 60 | GO:0004806: triglyceride lipase activity | 7.84E-03 |
| 61 | GO:0030247: polysaccharide binding | 7.84E-03 |
| 62 | GO:0031490: chromatin DNA binding | 9.46E-03 |
| 63 | GO:0015297: antiporter activity | 1.00E-02 |
| 64 | GO:0030234: enzyme regulator activity | 1.05E-02 |
| 65 | GO:0005545: 1-phosphatidylinositol binding | 1.05E-02 |
| 66 | GO:0016740: transferase activity | 1.10E-02 |
| 67 | GO:0008559: xenobiotic-transporting ATPase activity | 1.17E-02 |
| 68 | GO:0047372: acylglycerol lipase activity | 1.17E-02 |
| 69 | GO:0015386: potassium:proton antiporter activity | 1.17E-02 |
| 70 | GO:0004364: glutathione transferase activity | 1.37E-02 |
| 71 | GO:0000155: phosphorelay sensor kinase activity | 1.41E-02 |
| 72 | GO:0005388: calcium-transporting ATPase activity | 1.41E-02 |
| 73 | GO:0004565: beta-galactosidase activity | 1.41E-02 |
| 74 | GO:0031624: ubiquitin conjugating enzyme binding | 1.53E-02 |
| 75 | GO:0016787: hydrolase activity | 1.53E-02 |
| 76 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 1.53E-02 |
| 77 | GO:0008061: chitin binding | 1.66E-02 |
| 78 | GO:0003712: transcription cofactor activity | 1.66E-02 |
| 79 | GO:0001046: core promoter sequence-specific DNA binding | 1.93E-02 |
| 80 | GO:0016298: lipase activity | 2.00E-02 |
| 81 | GO:0031625: ubiquitin protein ligase binding | 2.14E-02 |
| 82 | GO:0035251: UDP-glucosyltransferase activity | 2.22E-02 |
| 83 | GO:0036459: thiol-dependent ubiquitinyl hydrolase activity | 2.22E-02 |
| 84 | GO:0045735: nutrient reservoir activity | 2.28E-02 |
| 85 | GO:0016779: nucleotidyltransferase activity | 2.37E-02 |
| 86 | GO:0008810: cellulase activity | 2.52E-02 |
| 87 | GO:0022857: transmembrane transporter activity | 2.59E-02 |
| 88 | GO:0003727: single-stranded RNA binding | 2.67E-02 |
| 89 | GO:0003756: protein disulfide isomerase activity | 2.67E-02 |
| 90 | GO:0046872: metal ion binding | 2.82E-02 |
| 91 | GO:0047134: protein-disulfide reductase activity | 2.83E-02 |
| 92 | GO:0005102: receptor binding | 2.83E-02 |
| 93 | GO:0004527: exonuclease activity | 3.16E-02 |
| 94 | GO:0030276: clathrin binding | 3.16E-02 |
| 95 | GO:0004871: signal transducer activity | 3.22E-02 |
| 96 | GO:0004791: thioredoxin-disulfide reductase activity | 3.32E-02 |
| 97 | GO:0016853: isomerase activity | 3.32E-02 |
| 98 | GO:0010181: FMN binding | 3.32E-02 |
| 99 | GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | 3.34E-02 |
| 100 | GO:0004843: thiol-dependent ubiquitin-specific protease activity | 3.67E-02 |
| 101 | GO:0030170: pyridoxal phosphate binding | 3.81E-02 |
| 102 | GO:0015385: sodium:proton antiporter activity | 4.02E-02 |
| 103 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 4.02E-02 |
| 104 | GO:0008483: transaminase activity | 4.39E-02 |
| 105 | GO:0015250: water channel activity | 4.76E-02 |
| 106 | GO:0051213: dioxygenase activity | 4.76E-02 |