GO Enrichment Analysis of Co-expressed Genes with
AT3G28420
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0090627: plant epidermal cell differentiation | 0.00E+00 |
| 2 | GO:0080127: fruit septum development | 0.00E+00 |
| 3 | GO:0046486: glycerolipid metabolic process | 0.00E+00 |
| 4 | GO:0019988: charged-tRNA amino acid modification | 0.00E+00 |
| 5 | GO:0045014: negative regulation of transcription by glucose | 0.00E+00 |
| 6 | GO:0046620: regulation of organ growth | 2.48E-06 |
| 7 | GO:0009733: response to auxin | 1.78E-05 |
| 8 | GO:0051322: anaphase | 2.66E-05 |
| 9 | GO:0042793: transcription from plastid promoter | 6.36E-05 |
| 10 | GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process | 1.88E-04 |
| 11 | GO:0015904: tetracycline transport | 1.88E-04 |
| 12 | GO:0009734: auxin-activated signaling pathway | 2.00E-04 |
| 13 | GO:0009828: plant-type cell wall loosening | 2.07E-04 |
| 14 | GO:0048829: root cap development | 3.21E-04 |
| 15 | GO:0006949: syncytium formation | 3.21E-04 |
| 16 | GO:0010569: regulation of double-strand break repair via homologous recombination | 4.24E-04 |
| 17 | GO:0006650: glycerophospholipid metabolic process | 4.24E-04 |
| 18 | GO:0018026: peptidyl-lysine monomethylation | 4.24E-04 |
| 19 | GO:1900033: negative regulation of trichome patterning | 4.24E-04 |
| 20 | GO:0080009: mRNA methylation | 4.24E-04 |
| 21 | GO:2000123: positive regulation of stomatal complex development | 4.24E-04 |
| 22 | GO:0010588: cotyledon vascular tissue pattern formation | 4.86E-04 |
| 23 | GO:0046168: glycerol-3-phosphate catabolic process | 6.92E-04 |
| 24 | GO:0006518: peptide metabolic process | 6.92E-04 |
| 25 | GO:0001578: microtubule bundle formation | 6.92E-04 |
| 26 | GO:0003333: amino acid transmembrane transport | 9.07E-04 |
| 27 | GO:0009664: plant-type cell wall organization | 9.33E-04 |
| 28 | GO:0006072: glycerol-3-phosphate metabolic process | 9.86E-04 |
| 29 | GO:0010306: rhamnogalacturonan II biosynthetic process | 9.86E-04 |
| 30 | GO:0045017: glycerolipid biosynthetic process | 9.86E-04 |
| 31 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 1.07E-03 |
| 32 | GO:0006221: pyrimidine nucleotide biosynthetic process | 1.31E-03 |
| 33 | GO:2000038: regulation of stomatal complex development | 1.31E-03 |
| 34 | GO:0048629: trichome patterning | 1.31E-03 |
| 35 | GO:0000226: microtubule cytoskeleton organization | 1.36E-03 |
| 36 | GO:0010375: stomatal complex patterning | 1.66E-03 |
| 37 | GO:0080110: sporopollenin biosynthetic process | 1.66E-03 |
| 38 | GO:0016554: cytidine to uridine editing | 2.05E-03 |
| 39 | GO:0009913: epidermal cell differentiation | 2.05E-03 |
| 40 | GO:1902456: regulation of stomatal opening | 2.05E-03 |
| 41 | GO:0003006: developmental process involved in reproduction | 2.05E-03 |
| 42 | GO:0000910: cytokinesis | 2.44E-03 |
| 43 | GO:0015937: coenzyme A biosynthetic process | 2.90E-03 |
| 44 | GO:0010103: stomatal complex morphogenesis | 2.90E-03 |
| 45 | GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway | 2.90E-03 |
| 46 | GO:0048528: post-embryonic root development | 2.90E-03 |
| 47 | GO:0042255: ribosome assembly | 3.36E-03 |
| 48 | GO:0006353: DNA-templated transcription, termination | 3.36E-03 |
| 49 | GO:0009231: riboflavin biosynthetic process | 3.36E-03 |
| 50 | GO:0007186: G-protein coupled receptor signaling pathway | 3.84E-03 |
| 51 | GO:0019430: removal of superoxide radicals | 3.84E-03 |
| 52 | GO:0006865: amino acid transport | 4.07E-03 |
| 53 | GO:0048507: meristem development | 4.35E-03 |
| 54 | GO:0048589: developmental growth | 4.35E-03 |
| 55 | GO:1900865: chloroplast RNA modification | 4.87E-03 |
| 56 | GO:0009826: unidimensional cell growth | 5.24E-03 |
| 57 | GO:0045036: protein targeting to chloroplast | 5.42E-03 |
| 58 | GO:0009926: auxin polar transport | 5.48E-03 |
| 59 | GO:1903507: negative regulation of nucleic acid-templated transcription | 5.99E-03 |
| 60 | GO:0010216: maintenance of DNA methylation | 5.99E-03 |
| 61 | GO:0009416: response to light stimulus | 6.11E-03 |
| 62 | GO:0045037: protein import into chloroplast stroma | 6.58E-03 |
| 63 | GO:0010582: floral meristem determinacy | 6.58E-03 |
| 64 | GO:0010152: pollen maturation | 6.58E-03 |
| 65 | GO:0009691: cytokinin biosynthetic process | 7.19E-03 |
| 66 | GO:0030048: actin filament-based movement | 7.19E-03 |
| 67 | GO:0048467: gynoecium development | 7.82E-03 |
| 68 | GO:0080188: RNA-directed DNA methylation | 8.47E-03 |
| 69 | GO:0048367: shoot system development | 9.02E-03 |
| 70 | GO:0006636: unsaturated fatty acid biosynthetic process | 9.14E-03 |
| 71 | GO:0080147: root hair cell development | 9.83E-03 |
| 72 | GO:0006874: cellular calcium ion homeostasis | 1.05E-02 |
| 73 | GO:0010073: meristem maintenance | 1.05E-02 |
| 74 | GO:0006825: copper ion transport | 1.05E-02 |
| 75 | GO:0019953: sexual reproduction | 1.05E-02 |
| 76 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 1.20E-02 |
| 77 | GO:0048443: stamen development | 1.35E-02 |
| 78 | GO:0006284: base-excision repair | 1.35E-02 |
| 79 | GO:0042127: regulation of cell proliferation | 1.35E-02 |
| 80 | GO:0010584: pollen exine formation | 1.35E-02 |
| 81 | GO:0080022: primary root development | 1.51E-02 |
| 82 | GO:0008033: tRNA processing | 1.51E-02 |
| 83 | GO:0010087: phloem or xylem histogenesis | 1.51E-02 |
| 84 | GO:0010118: stomatal movement | 1.51E-02 |
| 85 | GO:0010305: leaf vascular tissue pattern formation | 1.60E-02 |
| 86 | GO:0048868: pollen tube development | 1.60E-02 |
| 87 | GO:0007275: multicellular organism development | 1.62E-02 |
| 88 | GO:0007018: microtubule-based movement | 1.68E-02 |
| 89 | GO:0040008: regulation of growth | 1.74E-02 |
| 90 | GO:0048825: cotyledon development | 1.77E-02 |
| 91 | GO:0008654: phospholipid biosynthetic process | 1.77E-02 |
| 92 | GO:0009851: auxin biosynthetic process | 1.77E-02 |
| 93 | GO:0045490: pectin catabolic process | 1.83E-02 |
| 94 | GO:0080156: mitochondrial mRNA modification | 1.85E-02 |
| 95 | GO:0071554: cell wall organization or biogenesis | 1.85E-02 |
| 96 | GO:0010583: response to cyclopentenone | 1.94E-02 |
| 97 | GO:0019761: glucosinolate biosynthetic process | 1.94E-02 |
| 98 | GO:0007267: cell-cell signaling | 2.22E-02 |
| 99 | GO:0010027: thylakoid membrane organization | 2.41E-02 |
| 100 | GO:0009627: systemic acquired resistance | 2.61E-02 |
| 101 | GO:0009658: chloroplast organization | 2.83E-02 |
| 102 | GO:0048481: plant ovule development | 2.91E-02 |
| 103 | GO:0045893: positive regulation of transcription, DNA-templated | 2.91E-02 |
| 104 | GO:0009860: pollen tube growth | 3.04E-02 |
| 105 | GO:0006811: ion transport | 3.12E-02 |
| 106 | GO:0005975: carbohydrate metabolic process | 3.28E-02 |
| 107 | GO:0006839: mitochondrial transport | 3.78E-02 |
| 108 | GO:0030001: metal ion transport | 3.78E-02 |
| 109 | GO:0008283: cell proliferation | 4.13E-02 |
| 110 | GO:0010114: response to red light | 4.13E-02 |
| 111 | GO:0031347: regulation of defense response | 4.73E-02 |
| 112 | GO:0032259: methylation | 4.93E-02 |
| 113 | GO:0016042: lipid catabolic process | 5.00E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004746: riboflavin synthase activity | 0.00E+00 |
| 2 | GO:0071633: dihydroceramidase activity | 0.00E+00 |
| 3 | GO:0043399: tRNA A64-2'-O-ribosylphosphate transferase activity | 0.00E+00 |
| 4 | GO:0016763: transferase activity, transferring pentosyl groups | 0.00E+00 |
| 5 | GO:0004930: G-protein coupled receptor activity | 2.66E-05 |
| 6 | GO:0004632: phosphopantothenate--cysteine ligase activity | 1.88E-04 |
| 7 | GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity | 1.88E-04 |
| 8 | GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity | 1.88E-04 |
| 9 | GO:0052381: tRNA dimethylallyltransferase activity | 1.88E-04 |
| 10 | GO:0004016: adenylate cyclase activity | 1.88E-04 |
| 11 | GO:0008805: carbon-monoxide oxygenase activity | 4.24E-04 |
| 12 | GO:0008493: tetracycline transporter activity | 4.24E-04 |
| 13 | GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity | 4.24E-04 |
| 14 | GO:0042389: omega-3 fatty acid desaturase activity | 4.24E-04 |
| 15 | GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity | 4.24E-04 |
| 16 | GO:0003725: double-stranded RNA binding | 4.86E-04 |
| 17 | GO:0016805: dipeptidase activity | 6.92E-04 |
| 18 | GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity | 6.92E-04 |
| 19 | GO:0009041: uridylate kinase activity | 9.86E-04 |
| 20 | GO:0001872: (1->3)-beta-D-glucan binding | 9.86E-04 |
| 21 | GO:0030570: pectate lyase activity | 1.07E-03 |
| 22 | GO:0010328: auxin influx transmembrane transporter activity | 1.31E-03 |
| 23 | GO:0016279: protein-lysine N-methyltransferase activity | 1.31E-03 |
| 24 | GO:0010011: auxin binding | 1.31E-03 |
| 25 | GO:0019104: DNA N-glycosylase activity | 1.31E-03 |
| 26 | GO:0004888: transmembrane signaling receptor activity | 1.66E-03 |
| 27 | GO:0003723: RNA binding | 1.89E-03 |
| 28 | GO:0004784: superoxide dismutase activity | 2.05E-03 |
| 29 | GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding | 2.47E-03 |
| 30 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 3.84E-03 |
| 31 | GO:0043621: protein self-association | 5.93E-03 |
| 32 | GO:0015293: symporter activity | 6.15E-03 |
| 33 | GO:0000049: tRNA binding | 6.58E-03 |
| 34 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 7.82E-03 |
| 35 | GO:0003774: motor activity | 7.82E-03 |
| 36 | GO:0015171: amino acid transmembrane transporter activity | 8.18E-03 |
| 37 | GO:0005217: intracellular ligand-gated ion channel activity | 8.47E-03 |
| 38 | GO:0004970: ionotropic glutamate receptor activity | 8.47E-03 |
| 39 | GO:0003714: transcription corepressor activity | 9.83E-03 |
| 40 | GO:0003677: DNA binding | 1.15E-02 |
| 41 | GO:0004519: endonuclease activity | 1.32E-02 |
| 42 | GO:0003727: single-stranded RNA binding | 1.35E-02 |
| 43 | GO:0046872: metal ion binding | 1.42E-02 |
| 44 | GO:0001085: RNA polymerase II transcription factor binding | 1.60E-02 |
| 45 | GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity | 1.60E-02 |
| 46 | GO:0050662: coenzyme binding | 1.68E-02 |
| 47 | GO:0019901: protein kinase binding | 1.77E-02 |
| 48 | GO:0008017: microtubule binding | 1.91E-02 |
| 49 | GO:0004518: nuclease activity | 1.94E-02 |
| 50 | GO:0008237: metallopeptidase activity | 2.22E-02 |
| 51 | GO:0005200: structural constituent of cytoskeleton | 2.22E-02 |
| 52 | GO:0016413: O-acetyltransferase activity | 2.31E-02 |
| 53 | GO:0051213: dioxygenase activity | 2.41E-02 |
| 54 | GO:0030247: polysaccharide binding | 2.71E-02 |
| 55 | GO:0008168: methyltransferase activity | 2.72E-02 |
| 56 | GO:0016788: hydrolase activity, acting on ester bonds | 2.88E-02 |
| 57 | GO:0005096: GTPase activator activity | 3.02E-02 |
| 58 | GO:0004222: metalloendopeptidase activity | 3.12E-02 |
| 59 | GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 3.23E-02 |
| 60 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 3.45E-02 |
| 61 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 3.46E-02 |
| 62 | GO:0051539: 4 iron, 4 sulfur cluster binding | 3.78E-02 |
| 63 | GO:0052689: carboxylic ester hydrolase activity | 3.87E-02 |
| 64 | GO:0003700: transcription factor activity, sequence-specific DNA binding | 4.57E-02 |
| 65 | GO:0051287: NAD binding | 4.73E-02 |