Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G28210

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1902009: positive regulation of toxin transport0.00E+00
2GO:0010324: membrane invagination0.00E+00
3GO:0071327: cellular response to trehalose stimulus0.00E+00
4GO:0043048: dolichyl monophosphate biosynthetic process0.00E+00
5GO:1902289: negative regulation of defense response to oomycetes0.00E+00
6GO:0098755: maintenance of seed dormancy by absisic acid0.00E+00
7GO:1900367: positive regulation of defense response to insect0.00E+00
8GO:2000378: negative regulation of reactive oxygen species metabolic process0.00E+00
9GO:0002376: immune system process0.00E+00
10GO:0010200: response to chitin2.20E-11
11GO:0060548: negative regulation of cell death7.62E-07
12GO:0042742: defense response to bacterium2.81E-06
13GO:0009751: response to salicylic acid3.71E-06
14GO:0019725: cellular homeostasis6.25E-06
15GO:0031348: negative regulation of defense response1.47E-05
16GO:0009737: response to abscisic acid8.64E-05
17GO:0009266: response to temperature stimulus1.07E-04
18GO:0009617: response to bacterium1.23E-04
19GO:0010225: response to UV-C1.32E-04
20GO:0045927: positive regulation of growth1.32E-04
21GO:0034052: positive regulation of plant-type hypersensitive response1.32E-04
22GO:0009626: plant-type hypersensitive response1.34E-04
23GO:0009759: indole glucosinolate biosynthetic process1.90E-04
24GO:0006468: protein phosphorylation1.99E-04
25GO:0006979: response to oxidative stress3.32E-04
26GO:1900056: negative regulation of leaf senescence3.33E-04
27GO:1901183: positive regulation of camalexin biosynthetic process3.73E-04
28GO:0009270: response to humidity3.73E-04
29GO:0006643: membrane lipid metabolic process3.73E-04
30GO:0019478: D-amino acid catabolic process3.73E-04
31GO:0050691: regulation of defense response to virus by host3.73E-04
32GO:0051938: L-glutamate import3.73E-04
33GO:0015969: guanosine tetraphosphate metabolic process3.73E-04
34GO:0009609: response to symbiotic bacterium3.73E-04
35GO:0010421: hydrogen peroxide-mediated programmed cell death3.73E-04
36GO:0006562: proline catabolic process3.73E-04
37GO:0010482: regulation of epidermal cell division3.73E-04
38GO:0010150: leaf senescence4.91E-04
39GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway7.24E-04
40GO:0009611: response to wounding7.32E-04
41GO:0035556: intracellular signal transduction7.86E-04
42GO:0044419: interspecies interaction between organisms8.10E-04
43GO:0031349: positive regulation of defense response8.10E-04
44GO:0034243: regulation of transcription elongation from RNA polymerase II promoter8.10E-04
45GO:0043091: L-arginine import8.10E-04
46GO:0006597: spermine biosynthetic process8.10E-04
47GO:0015914: phospholipid transport8.10E-04
48GO:0080151: positive regulation of salicylic acid mediated signaling pathway8.10E-04
49GO:0010133: proline catabolic process to glutamate8.10E-04
50GO:0009838: abscission8.10E-04
51GO:0015802: basic amino acid transport8.10E-04
52GO:0010618: aerenchyma formation8.10E-04
53GO:0000719: photoreactive repair8.10E-04
54GO:0001666: response to hypoxia9.34E-04
55GO:0009414: response to water deprivation9.97E-04
56GO:0009816: defense response to bacterium, incompatible interaction1.00E-03
57GO:0008361: regulation of cell size1.11E-03
58GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway1.31E-03
59GO:0009062: fatty acid catabolic process1.31E-03
60GO:1900140: regulation of seedling development1.31E-03
61GO:0045793: positive regulation of cell size1.31E-03
62GO:0010186: positive regulation of cellular defense response1.31E-03
63GO:0032786: positive regulation of DNA-templated transcription, elongation1.31E-03
64GO:0042218: 1-aminocyclopropane-1-carboxylate biosynthetic process1.31E-03
65GO:0009653: anatomical structure morphogenesis1.31E-03
66GO:0006048: UDP-N-acetylglucosamine biosynthetic process1.31E-03
67GO:0007034: vacuolar transport1.41E-03
68GO:0002237: response to molecule of bacterial origin1.41E-03
69GO:0046777: protein autophosphorylation1.74E-03
70GO:0072583: clathrin-dependent endocytosis1.89E-03
71GO:0015696: ammonium transport1.89E-03
72GO:0002679: respiratory burst involved in defense response1.89E-03
73GO:0051289: protein homotetramerization1.89E-03
74GO:0034219: carbohydrate transmembrane transport1.89E-03
75GO:0070301: cellular response to hydrogen peroxide1.89E-03
76GO:0043207: response to external biotic stimulus1.89E-03
77GO:0072334: UDP-galactose transmembrane transport1.89E-03
78GO:0015749: monosaccharide transport1.89E-03
79GO:0006537: glutamate biosynthetic process1.89E-03
80GO:0045892: negative regulation of transcription, DNA-templated2.19E-03
81GO:0051567: histone H3-K9 methylation2.54E-03
82GO:0010188: response to microbial phytotoxin2.54E-03
83GO:0080142: regulation of salicylic acid biosynthetic process2.54E-03
84GO:0046345: abscisic acid catabolic process2.54E-03
85GO:0010483: pollen tube reception2.54E-03
86GO:0009652: thigmotropism2.54E-03
87GO:1902584: positive regulation of response to water deprivation2.54E-03
88GO:0072488: ammonium transmembrane transport2.54E-03
89GO:1901002: positive regulation of response to salt stress2.54E-03
90GO:0071456: cellular response to hypoxia2.59E-03
91GO:0009625: response to insect2.83E-03
92GO:0009753: response to jasmonic acid3.48E-03
93GO:0006662: glycerol ether metabolic process3.88E-03
94GO:0046323: glucose import3.88E-03
95GO:1900425: negative regulation of defense response to bacterium4.02E-03
96GO:0006596: polyamine biosynthetic process4.02E-03
97GO:0006574: valine catabolic process4.02E-03
98GO:0010942: positive regulation of cell death4.02E-03
99GO:0009612: response to mechanical stimulus4.85E-03
100GO:0034389: lipid particle organization4.85E-03
101GO:0031930: mitochondria-nucleus signaling pathway4.85E-03
102GO:0010555: response to mannitol4.85E-03
103GO:0010310: regulation of hydrogen peroxide metabolic process4.85E-03
104GO:2000067: regulation of root morphogenesis4.85E-03
105GO:0042372: phylloquinone biosynthetic process4.85E-03
106GO:0045926: negative regulation of growth4.85E-03
107GO:0009620: response to fungus4.97E-03
108GO:0050829: defense response to Gram-negative bacterium5.73E-03
109GO:0010044: response to aluminum ion5.73E-03
110GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway5.73E-03
111GO:0006401: RNA catabolic process5.73E-03
112GO:0009610: response to symbiotic fungus5.73E-03
113GO:0046470: phosphatidylcholine metabolic process5.73E-03
114GO:0043090: amino acid import5.73E-03
115GO:0080186: developmental vegetative growth5.73E-03
116GO:0018105: peptidyl-serine phosphorylation5.79E-03
117GO:0006904: vesicle docking involved in exocytosis6.18E-03
118GO:0051607: defense response to virus6.55E-03
119GO:0006605: protein targeting6.65E-03
120GO:0035265: organ growth6.65E-03
121GO:0009787: regulation of abscisic acid-activated signaling pathway6.65E-03
122GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline6.65E-03
123GO:0010120: camalexin biosynthetic process7.64E-03
124GO:0030968: endoplasmic reticulum unfolded protein response7.64E-03
125GO:2000031: regulation of salicylic acid mediated signaling pathway7.64E-03
126GO:0010099: regulation of photomorphogenesis7.64E-03
127GO:0007186: G-protein coupled receptor signaling pathway7.64E-03
128GO:0010112: regulation of systemic acquired resistance8.66E-03
129GO:0009835: fruit ripening8.66E-03
130GO:0046685: response to arsenic-containing substance8.66E-03
131GO:0006098: pentose-phosphate shunt8.66E-03
132GO:0009821: alkaloid biosynthetic process8.66E-03
133GO:0051865: protein autoubiquitination8.66E-03
134GO:0090305: nucleic acid phosphodiester bond hydrolysis8.66E-03
135GO:1900426: positive regulation of defense response to bacterium9.74E-03
136GO:0007568: aging1.05E-02
137GO:0006032: chitin catabolic process1.09E-02
138GO:0006325: chromatin organization1.09E-02
139GO:0006952: defense response1.16E-02
140GO:0052544: defense response by callose deposition in cell wall1.20E-02
141GO:0009750: response to fructose1.20E-02
142GO:0048765: root hair cell differentiation1.20E-02
143GO:0019684: photosynthesis, light reaction1.20E-02
144GO:0009682: induced systemic resistance1.20E-02
145GO:0034599: cellular response to oxidative stress1.21E-02
146GO:0002213: defense response to insect1.33E-02
147GO:0006470: protein dephosphorylation1.33E-02
148GO:0010105: negative regulation of ethylene-activated signaling pathway1.33E-02
149GO:0007166: cell surface receptor signaling pathway1.33E-02
150GO:0012501: programmed cell death1.33E-02
151GO:0015706: nitrate transport1.33E-02
152GO:0007275: multicellular organism development1.40E-02
153GO:0055046: microgametogenesis1.45E-02
154GO:2000012: regulation of auxin polar transport1.45E-02
155GO:0009744: response to sucrose1.49E-02
156GO:0051707: response to other organism1.49E-02
157GO:0000209: protein polyubiquitination1.55E-02
158GO:0009636: response to toxic substance1.68E-02
159GO:0046854: phosphatidylinositol phosphorylation1.71E-02
160GO:0010053: root epidermal cell differentiation1.71E-02
161GO:0042343: indole glucosinolate metabolic process1.71E-02
162GO:0010167: response to nitrate1.71E-02
163GO:0009651: response to salt stress1.81E-02
164GO:0031347: regulation of defense response1.81E-02
165GO:0006351: transcription, DNA-templated1.83E-02
166GO:0042538: hyperosmotic salinity response1.87E-02
167GO:0080147: root hair cell development1.99E-02
168GO:0030150: protein import into mitochondrial matrix1.99E-02
169GO:0005992: trehalose biosynthetic process1.99E-02
170GO:0009116: nucleoside metabolic process1.99E-02
171GO:0051302: regulation of cell division2.14E-02
172GO:0010026: trichome differentiation2.14E-02
173GO:0003333: amino acid transmembrane transport2.29E-02
174GO:0016998: cell wall macromolecule catabolic process2.29E-02
175GO:0098542: defense response to other organism2.29E-02
176GO:0019915: lipid storage2.29E-02
177GO:0009723: response to ethylene2.35E-02
178GO:2000022: regulation of jasmonic acid mediated signaling pathway2.44E-02
179GO:0035428: hexose transmembrane transport2.44E-02
180GO:0030433: ubiquitin-dependent ERAD pathway2.44E-02
181GO:0080167: response to karrikin2.56E-02
182GO:0009411: response to UV2.60E-02
183GO:0006012: galactose metabolic process2.60E-02
184GO:0009693: ethylene biosynthetic process2.60E-02
185GO:0009738: abscisic acid-activated signaling pathway2.62E-02
186GO:0009306: protein secretion2.76E-02
187GO:0009789: positive regulation of abscisic acid-activated signaling pathway2.92E-02
188GO:0009742: brassinosteroid mediated signaling pathway3.04E-02
189GO:0010118: stomatal movement3.08E-02
190GO:0009741: response to brassinosteroid3.25E-02
191GO:0050832: defense response to fungus3.27E-02
192GO:0009646: response to absence of light3.42E-02
193GO:0009749: response to glucose3.60E-02
194GO:0008654: phospholipid biosynthetic process3.60E-02
195GO:0010193: response to ozone3.78E-02
196GO:0006635: fatty acid beta-oxidation3.78E-02
197GO:0009058: biosynthetic process3.78E-02
198GO:0071554: cell wall organization or biogenesis3.78E-02
199GO:0016032: viral process3.96E-02
200GO:0007264: small GTPase mediated signal transduction3.96E-02
201GO:0019760: glucosinolate metabolic process4.33E-02
202GO:0009911: positive regulation of flower development4.91E-02
203GO:0009615: response to virus4.91E-02
RankGO TermAdjusted P value
1GO:0005358: high-affinity hydrogen:glucose symporter activity0.00E+00
2GO:0051499: D-aminoacyl-tRNA deacylase activity0.00E+00
3GO:0004168: dolichol kinase activity0.00E+00
4GO:0004610: phosphoacetylglucosamine mutase activity0.00E+00
5GO:0005509: calcium ion binding6.21E-05
6GO:0004672: protein kinase activity7.98E-05
7GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity3.73E-04
8GO:0016768: spermine synthase activity3.73E-04
9GO:2001147: camalexin binding3.73E-04
10GO:0009679: hexose:proton symporter activity3.73E-04
11GO:0032050: clathrin heavy chain binding3.73E-04
12GO:0008809: carnitine racemase activity3.73E-04
13GO:2001227: quercitrin binding3.73E-04
14GO:0050308: sugar-phosphatase activity3.73E-04
15GO:0004657: proline dehydrogenase activity3.73E-04
16GO:0015398: high-affinity secondary active ammonium transmembrane transporter activity3.73E-04
17GO:0016301: kinase activity4.31E-04
18GO:0043565: sequence-specific DNA binding6.94E-04
19GO:0005515: protein binding7.83E-04
20GO:0015036: disulfide oxidoreductase activity8.10E-04
21GO:0008728: GTP diphosphokinase activity8.10E-04
22GO:0004766: spermidine synthase activity8.10E-04
23GO:0009931: calcium-dependent protein serine/threonine kinase activity1.07E-03
24GO:0004683: calmodulin-dependent protein kinase activity1.15E-03
25GO:0031683: G-protein beta/gamma-subunit complex binding1.31E-03
26GO:0001664: G-protein coupled receptor binding1.31E-03
27GO:0008442: 3-hydroxyisobutyrate dehydrogenase activity1.31E-03
28GO:0015181: arginine transmembrane transporter activity1.89E-03
29GO:0016656: monodehydroascorbate reductase (NADH) activity1.89E-03
30GO:0004165: dodecenoyl-CoA delta-isomerase activity1.89E-03
31GO:0015189: L-lysine transmembrane transporter activity1.89E-03
32GO:0043424: protein histidine kinase binding2.16E-03
33GO:0004871: signal transducer activity2.31E-03
34GO:0033612: receptor serine/threonine kinase binding2.37E-03
35GO:0000993: RNA polymerase II core binding2.54E-03
36GO:0005313: L-glutamate transmembrane transporter activity2.54E-03
37GO:0005546: phosphatidylinositol-4,5-bisphosphate binding3.25E-03
38GO:0070696: transmembrane receptor protein serine/threonine kinase binding3.25E-03
39GO:0010294: abscisic acid glucosyltransferase activity3.25E-03
40GO:0005459: UDP-galactose transmembrane transporter activity3.25E-03
41GO:0015145: monosaccharide transmembrane transporter activity3.25E-03
42GO:0047134: protein-disulfide reductase activity3.33E-03
43GO:0004674: protein serine/threonine kinase activity3.62E-03
44GO:0008519: ammonium transmembrane transporter activity4.02E-03
45GO:0004605: phosphatidate cytidylyltransferase activity4.02E-03
46GO:0004791: thioredoxin-disulfide reductase activity4.18E-03
47GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity4.85E-03
48GO:0003978: UDP-glucose 4-epimerase activity4.85E-03
49GO:0004656: procollagen-proline 4-dioxygenase activity4.85E-03
50GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor5.46E-03
51GO:0008320: protein transmembrane transporter activity5.73E-03
52GO:0043295: glutathione binding5.73E-03
53GO:0005544: calcium-dependent phospholipid binding6.65E-03
54GO:0004869: cysteine-type endopeptidase inhibitor activity6.65E-03
55GO:0004714: transmembrane receptor protein tyrosine kinase activity6.65E-03
56GO:0016847: 1-aminocyclopropane-1-carboxylate synthase activity6.65E-03
57GO:0005524: ATP binding7.41E-03
58GO:0004430: 1-phosphatidylinositol 4-kinase activity7.64E-03
59GO:0004630: phospholipase D activity7.64E-03
60GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity7.64E-03
61GO:0008375: acetylglucosaminyltransferase activity7.76E-03
62GO:0004806: triglyceride lipase activity8.18E-03
63GO:0071949: FAD binding8.66E-03
64GO:0047617: acyl-CoA hydrolase activity9.74E-03
65GO:0016844: strictosidine synthase activity9.74E-03
66GO:0015112: nitrate transmembrane transporter activity9.74E-03
67GO:0015174: basic amino acid transmembrane transporter activity9.74E-03
68GO:0004675: transmembrane receptor protein serine/threonine kinase activity1.03E-02
69GO:0004713: protein tyrosine kinase activity1.09E-02
70GO:0004805: trehalose-phosphatase activity1.09E-02
71GO:0030234: enzyme regulator activity1.09E-02
72GO:0004568: chitinase activity1.09E-02
73GO:0003746: translation elongation factor activity1.15E-02
74GO:0005543: phospholipid binding1.20E-02
75GO:0004712: protein serine/threonine/tyrosine kinase activity1.26E-02
76GO:0004022: alcohol dehydrogenase (NAD) activity1.45E-02
77GO:0003700: transcription factor activity, sequence-specific DNA binding1.65E-02
78GO:0005516: calmodulin binding1.70E-02
79GO:0051119: sugar transmembrane transporter activity1.71E-02
80GO:0031418: L-ascorbic acid binding1.99E-02
81GO:0015171: amino acid transmembrane transporter activity2.23E-02
82GO:0008234: cysteine-type peptidase activity2.23E-02
83GO:0004707: MAP kinase activity2.29E-02
84GO:0003727: single-stranded RNA binding2.76E-02
85GO:0015035: protein disulfide oxidoreductase activity2.95E-02
86GO:0050662: coenzyme binding3.42E-02
87GO:0005355: glucose transmembrane transporter activity3.42E-02
88GO:0004722: protein serine/threonine phosphatase activity3.59E-02
89GO:0019901: protein kinase binding3.60E-02
90GO:0004518: nuclease activity3.96E-02
91GO:0004197: cysteine-type endopeptidase activity3.96E-02
92GO:0015144: carbohydrate transmembrane transporter activity4.28E-02
93GO:0016413: O-acetyltransferase activity4.71E-02
94GO:0004842: ubiquitin-protein transferase activity4.79E-02
95GO:0005351: sugar:proton symporter activity4.82E-02
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Gene type



Gene DE type