co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G28130

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0033494: ferulate metabolic process	0.00E+00
2	GO:2000121: regulation of removal of superoxide radicals	0.00E+00
3	GO:2000042: negative regulation of double-strand break repair via homologous recombination	0.00E+00
4	GO:0006573: valine metabolic process	0.00E+00
5	GO:0090355: positive regulation of auxin metabolic process	0.00E+00
6	GO:0090697: post-embryonic plant organ morphogenesis	0.00E+00
7	GO:0009661: chromoplast organization	0.00E+00
8	GO:0090358: positive regulation of tryptophan metabolic process	0.00E+00
9	GO:1905157: positive regulation of photosynthesis	0.00E+00
10	GO:2000469: negative regulation of peroxidase activity	0.00E+00
11	GO:0009904: chloroplast accumulation movement	5.56E-05
12	GO:0009903: chloroplast avoidance movement	1.13E-04
13	GO:0009690: cytokinin metabolic process	1.91E-04
14	GO:0007155: cell adhesion	1.91E-04
15	GO:1902025: nitrate import	2.20E-04
16	GO:0006551: leucine metabolic process	2.20E-04
17	GO:0046167: glycerol-3-phosphate biosynthetic process	2.20E-04
18	GO:0043007: maintenance of rDNA	2.20E-04
19	GO:0090548: response to nitrate starvation	2.20E-04
20	GO:1902334: fructose export from vacuole to cytoplasm	2.20E-04
21	GO:0010362: negative regulation of anion channel activity by blue light	2.20E-04
22	GO:0015969: guanosine tetraphosphate metabolic process	2.20E-04
23	GO:0006898: receptor-mediated endocytosis	4.90E-04
24	GO:0006650: glycerophospholipid metabolic process	4.90E-04
25	GO:0010541: acropetal auxin transport	4.90E-04
26	GO:1904143: positive regulation of carotenoid biosynthetic process	4.90E-04
27	GO:0010155: regulation of proton transport	4.90E-04
28	GO:0015790: UDP-xylose transport	4.90E-04
29	GO:0009637: response to blue light	6.73E-04
30	GO:0046168: glycerol-3-phosphate catabolic process	7.98E-04
31	GO:0010160: formation of animal organ boundary	7.98E-04
32	GO:0046621: negative regulation of organ growth	7.98E-04
33	GO:0006072: glycerol-3-phosphate metabolic process	1.14E-03
34	GO:1990019: protein storage vacuole organization	1.14E-03
35	GO:0090308: regulation of methylation-dependent chromatin silencing	1.14E-03
36	GO:0043481: anthocyanin accumulation in tissues in response to UV light	1.14E-03
37	GO:0019722: calcium-mediated signaling	1.44E-03
38	GO:0048443: stamen development	1.44E-03
39	GO:0008295: spermidine biosynthetic process	1.51E-03
40	GO:0032366: intracellular sterol transport	1.51E-03
41	GO:0006021: inositol biosynthetic process	1.51E-03
42	GO:0071483: cellular response to blue light	1.51E-03
43	GO:0048442: sepal development	1.51E-03
44	GO:0009765: photosynthesis, light harvesting	1.51E-03
45	GO:0034052: positive regulation of plant-type hypersensitive response	1.93E-03
46	GO:0016120: carotene biosynthetic process	1.93E-03
47	GO:0006465: signal peptide processing	1.93E-03
48	GO:0010315: auxin efflux	2.38E-03
49	GO:0046855: inositol phosphate dephosphorylation	2.38E-03
50	GO:0060918: auxin transport	2.38E-03
51	GO:0009643: photosynthetic acclimation	2.38E-03
52	GO:0032502: developmental process	2.38E-03
53	GO:0010076: maintenance of floral meristem identity	2.86E-03
54	GO:0009082: branched-chain amino acid biosynthetic process	2.86E-03
55	GO:0009099: valine biosynthetic process	2.86E-03
56	GO:0009554: megasporogenesis	2.86E-03
57	GO:0009854: oxidative photosynthetic carbon pathway	2.86E-03
58	GO:0010019: chloroplast-nucleus signaling pathway	2.86E-03
59	GO:0007267: cell-cell signaling	2.87E-03
60	GO:0048437: floral organ development	3.36E-03
61	GO:0009769: photosynthesis, light harvesting in photosystem II	3.36E-03
62	GO:0000122: negative regulation of transcription from RNA polymerase II promoter	3.36E-03
63	GO:0009645: response to low light intensity stimulus	3.36E-03
64	GO:0030307: positive regulation of cell growth	3.36E-03
65	GO:1900056: negative regulation of leaf senescence	3.36E-03
66	GO:0043068: positive regulation of programmed cell death	3.90E-03
67	GO:0050821: protein stabilization	3.90E-03
68	GO:0000105: histidine biosynthetic process	3.90E-03
69	GO:0009231: riboflavin biosynthetic process	3.90E-03
70	GO:0018298: protein-chromophore linkage	4.19E-03
71	GO:0009097: isoleucine biosynthetic process	4.47E-03
72	GO:0009932: cell tip growth	4.47E-03
73	GO:0006811: ion transport	4.61E-03
74	GO:0010218: response to far red light	4.61E-03
75	GO:0048527: lateral root development	4.84E-03
76	GO:0009821: alkaloid biosynthetic process	5.06E-03
77	GO:0051865: protein autoubiquitination	5.06E-03
78	GO:0048354: mucilage biosynthetic process involved in seed coat development	5.68E-03
79	GO:0010380: regulation of chlorophyll biosynthetic process	5.68E-03
80	GO:0009638: phototropism	5.68E-03
81	GO:0006995: cellular response to nitrogen starvation	6.32E-03
82	GO:0048441: petal development	6.32E-03
83	GO:0009641: shade avoidance	6.32E-03
84	GO:0010192: mucilage biosynthetic process	6.32E-03
85	GO:0031627: telomeric loop formation	6.32E-03
86	GO:0051555: flavonol biosynthetic process	6.32E-03
87	GO:0043085: positive regulation of catalytic activity	6.98E-03
88	GO:0009750: response to fructose	6.98E-03
89	GO:0010216: maintenance of DNA methylation	6.98E-03
90	GO:0009658: chloroplast organization	7.29E-03
91	GO:0008643: carbohydrate transport	7.39E-03
92	GO:0071555: cell wall organization	7.40E-03
93	GO:0008361: regulation of cell size	7.68E-03
94	GO:0006790: sulfur compound metabolic process	7.68E-03
95	GO:0009785: blue light signaling pathway	8.39E-03
96	GO:0030048: actin filament-based movement	8.39E-03
97	GO:0009767: photosynthetic electron transport chain	8.39E-03
98	GO:0007015: actin filament organization	9.13E-03
99	GO:0010223: secondary shoot formation	9.13E-03
100	GO:0009887: animal organ morphogenesis	9.13E-03
101	GO:0010540: basipetal auxin transport	9.13E-03
102	GO:0010143: cutin biosynthetic process	9.13E-03
103	GO:0048440: carpel development	9.13E-03
104	GO:0006857: oligopeptide transport	9.88E-03
105	GO:0019853: L-ascorbic acid biosynthetic process	9.90E-03
106	GO:0046854: phosphatidylinositol phosphorylation	9.90E-03
107	GO:0042343: indole glucosinolate metabolic process	9.90E-03
108	GO:0000162: tryptophan biosynthetic process	1.07E-02
109	GO:0007017: microtubule-based process	1.23E-02
110	GO:0009768: photosynthesis, light harvesting in photosystem I	1.23E-02
111	GO:0051260: protein homooligomerization	1.32E-02
112	GO:0098542: defense response to other organism	1.32E-02
113	GO:0019915: lipid storage	1.32E-02
114	GO:0009269: response to desiccation	1.32E-02
115	GO:0009814: defense response, incompatible interaction	1.40E-02
116	GO:0019748: secondary metabolic process	1.40E-02
117	GO:0009294: DNA mediated transformation	1.49E-02
118	GO:0071369: cellular response to ethylene stimulus	1.49E-02
119	GO:0006817: phosphate ion transport	1.58E-02
120	GO:0009306: protein secretion	1.58E-02
121	GO:0045489: pectin biosynthetic process	1.87E-02
122	GO:0009958: positive gravitropism	1.87E-02
123	GO:0006520: cellular amino acid metabolic process	1.87E-02
124	GO:0042744: hydrogen peroxide catabolic process	1.88E-02
125	GO:0009646: response to absence of light	1.97E-02
126	GO:0009749: response to glucose	2.07E-02
127	GO:0008654: phospholipid biosynthetic process	2.07E-02
128	GO:0009851: auxin biosynthetic process	2.07E-02
129	GO:0071554: cell wall organization or biogenesis	2.17E-02
130	GO:0007264: small GTPase mediated signal transduction	2.28E-02
131	GO:0010252: auxin homeostasis	2.49E-02
132	GO:0009639: response to red or far red light	2.49E-02
133	GO:0015995: chlorophyll biosynthetic process	3.17E-02
134	GO:0010411: xyloglucan metabolic process	3.17E-02
135	GO:0009416: response to light stimulus	3.23E-02
136	GO:0009826: unidimensional cell growth	3.39E-02
137	GO:0030244: cellulose biosynthetic process	3.41E-02
138	GO:0000160: phosphorelay signal transduction system	3.53E-02
139	GO:0009834: plant-type secondary cell wall biogenesis	3.66E-02
140	GO:0010119: regulation of stomatal movement	3.78E-02
141	GO:0007568: aging	3.78E-02
142	GO:0009910: negative regulation of flower development	3.78E-02
143	GO:0016051: carbohydrate biosynthetic process	4.03E-02
144	GO:0009853: photorespiration	4.03E-02
145	GO:0080167: response to karrikin	4.36E-02
146	GO:0044550: secondary metabolite biosynthetic process	4.73E-02
147	GO:0009640: photomorphogenesis	4.83E-02
148	GO:0010114: response to red light	4.83E-02
149	GO:0009926: auxin polar transport	4.83E-02
150	GO:0009744: response to sucrose	4.83E-02
151	GO:0042546: cell wall biogenesis	4.97E-02

Rank	GO Term	Adjusted P value
1	GO:0047230: flavonol-3-O-glucoside L-rhamnosyltransferase activity	0.00E+00
2	GO:0036361: racemase activity, acting on amino acids and derivatives	0.00E+00
3	GO:0016855: racemase and epimerase activity, acting on amino acids and derivatives	0.00E+00
4	GO:0009673: low-affinity phosphate transmembrane transporter activity	0.00E+00
5	GO:0000293: ferric-chelate reductase activity	8.18E-05
6	GO:0016618: hydroxypyruvate reductase activity	2.20E-04
7	GO:0003984: acetolactate synthase activity	2.20E-04
8	GO:0004328: formamidase activity	2.20E-04
9	GO:0003879: ATP phosphoribosyltransferase activity	2.20E-04
10	GO:0010347: L-galactose-1-phosphate phosphatase activity	2.20E-04
11	GO:0046906: tetrapyrrole binding	2.20E-04
12	GO:0047259: glucomannan 4-beta-mannosyltransferase activity	2.20E-04
13	GO:0008934: inositol monophosphate 1-phosphatase activity	4.90E-04
14	GO:0052833: inositol monophosphate 4-phosphatase activity	4.90E-04
15	GO:0005464: UDP-xylose transmembrane transporter activity	4.90E-04
16	GO:0005353: fructose transmembrane transporter activity	4.90E-04
17	GO:0008728: GTP diphosphokinase activity	4.90E-04
18	GO:0080045: quercetin 3'-O-glucosyltransferase activity	4.90E-04
19	GO:0008686: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity	4.90E-04
20	GO:0004766: spermidine synthase activity	4.90E-04
21	GO:0052832: inositol monophosphate 3-phosphatase activity	4.90E-04
22	GO:0050734: hydroxycinnamoyltransferase activity	7.98E-04
23	GO:0003935: GTP cyclohydrolase II activity	7.98E-04
24	GO:0030267: glyoxylate reductase (NADP) activity	7.98E-04
25	GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity	7.98E-04
26	GO:0022890: inorganic cation transmembrane transporter activity	1.14E-03
27	GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	1.14E-03
28	GO:0009882: blue light photoreceptor activity	1.14E-03
29	GO:0042277: peptide binding	1.51E-03
30	GO:0080032: methyl jasmonate esterase activity	1.51E-03
31	GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	1.93E-03
32	GO:0035673: oligopeptide transmembrane transporter activity	2.38E-03
33	GO:0080046: quercetin 4'-O-glucosyltransferase activity	2.38E-03
34	GO:0080030: methyl indole-3-acetate esterase activity	2.38E-03
35	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	2.86E-03
36	GO:0051753: mannan synthase activity	2.86E-03
37	GO:0016757: transferase activity, transferring glycosyl groups	3.02E-03
38	GO:0019899: enzyme binding	3.36E-03
39	GO:0016491: oxidoreductase activity	3.65E-03
40	GO:0103095: wax ester synthase activity	4.47E-03
41	GO:0047196: long-chain-alcohol O-fatty-acyltransferase activity	4.47E-03
42	GO:0016844: strictosidine synthase activity	5.68E-03
43	GO:0015386: potassium:proton antiporter activity	6.98E-03
44	GO:0008515: sucrose transmembrane transporter activity	6.98E-03
45	GO:0003691: double-stranded telomeric DNA binding	6.98E-03
46	GO:0016788: hydrolase activity, acting on ester bonds	7.46E-03
47	GO:0000976: transcription regulatory region sequence-specific DNA binding	7.68E-03
48	GO:0015198: oligopeptide transporter activity	7.68E-03
49	GO:0051287: NAD binding	8.28E-03
50	GO:0004565: beta-galactosidase activity	8.39E-03
51	GO:0010329: auxin efflux transmembrane transporter activity	8.39E-03
52	GO:0008081: phosphoric diester hydrolase activity	8.39E-03
53	GO:0005315: inorganic phosphate transmembrane transporter activity	8.39E-03
54	GO:0000155: phosphorelay sensor kinase activity	8.39E-03
55	GO:0003774: motor activity	9.13E-03
56	GO:0031624: ubiquitin conjugating enzyme binding	9.13E-03
57	GO:0008146: sulfotransferase activity	9.90E-03
58	GO:0051119: sugar transmembrane transporter activity	9.90E-03
59	GO:0031409: pigment binding	1.07E-02
60	GO:0052689: carboxylic ester hydrolase activity	1.09E-02
61	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	1.13E-02
62	GO:0080043: quercetin 3-O-glucosyltransferase activity	1.20E-02
63	GO:0080044: quercetin 7-O-glucosyltransferase activity	1.20E-02
64	GO:0015079: potassium ion transmembrane transporter activity	1.23E-02
65	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	1.40E-02
66	GO:0030570: pectate lyase activity	1.49E-02
67	GO:0008080: N-acetyltransferase activity	1.87E-02
68	GO:0015299: solute:proton antiporter activity	1.97E-02
69	GO:0010181: FMN binding	1.97E-02
70	GO:0005355: glucose transmembrane transporter activity	1.97E-02
71	GO:0016762: xyloglucan:xyloglucosyl transferase activity	2.17E-02
72	GO:0008194: UDP-glycosyltransferase activity	2.55E-02
73	GO:0016722: oxidoreductase activity, oxidizing metal ions	2.60E-02
74	GO:0016597: amino acid binding	2.71E-02
75	GO:0016413: O-acetyltransferase activity	2.71E-02
76	GO:0016168: chlorophyll binding	2.94E-02
77	GO:0016798: hydrolase activity, acting on glycosyl bonds	3.17E-02
78	GO:0004601: peroxidase activity	3.53E-02
79	GO:0030145: manganese ion binding	3.78E-02
80	GO:0061630: ubiquitin protein ligase activity	4.58E-02
81	GO:0020037: heme binding	4.78E-02
82	GO:0004185: serine-type carboxypeptidase activity	4.83E-02