GO Enrichment Analysis of Co-expressed Genes with
AT3G27820
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0043488: regulation of mRNA stability | 0.00E+00 |
| 2 | GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate | 0.00E+00 |
| 3 | GO:0018131: oxazole or thiazole biosynthetic process | 0.00E+00 |
| 4 | GO:0000489: maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) | 0.00E+00 |
| 5 | GO:0042407: cristae formation | 0.00E+00 |
| 6 | GO:0000455: enzyme-directed rRNA pseudouridine synthesis | 0.00E+00 |
| 7 | GO:0046460: neutral lipid biosynthetic process | 0.00E+00 |
| 8 | GO:0000488: maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) | 0.00E+00 |
| 9 | GO:0010157: response to chlorate | 0.00E+00 |
| 10 | GO:0006399: tRNA metabolic process | 0.00E+00 |
| 11 | GO:0070125: mitochondrial translational elongation | 0.00E+00 |
| 12 | GO:0009793: embryo development ending in seed dormancy | 2.62E-06 |
| 13 | GO:0009658: chloroplast organization | 3.96E-05 |
| 14 | GO:0006353: DNA-templated transcription, termination | 7.12E-05 |
| 15 | GO:0071482: cellular response to light stimulus | 9.00E-05 |
| 16 | GO:0009657: plastid organization | 9.00E-05 |
| 17 | GO:0000023: maltose metabolic process | 1.16E-04 |
| 18 | GO:0006419: alanyl-tRNA aminoacylation | 1.16E-04 |
| 19 | GO:0000476: maturation of 4.5S rRNA | 1.16E-04 |
| 20 | GO:0000967: rRNA 5'-end processing | 1.16E-04 |
| 21 | GO:0042547: cell wall modification involved in multidimensional cell growth | 1.16E-04 |
| 22 | GO:0042371: vitamin K biosynthetic process | 1.16E-04 |
| 23 | GO:1902458: positive regulation of stomatal opening | 1.16E-04 |
| 24 | GO:0009790: embryo development | 1.32E-04 |
| 25 | GO:0006415: translational termination | 1.86E-04 |
| 26 | GO:0006352: DNA-templated transcription, initiation | 1.86E-04 |
| 27 | GO:0045037: protein import into chloroplast stroma | 2.16E-04 |
| 28 | GO:0006423: cysteinyl-tRNA aminoacylation | 2.69E-04 |
| 29 | GO:0009629: response to gravity | 2.69E-04 |
| 30 | GO:0007154: cell communication | 2.69E-04 |
| 31 | GO:0009220: pyrimidine ribonucleotide biosynthetic process | 2.69E-04 |
| 32 | GO:1903426: regulation of reactive oxygen species biosynthetic process | 2.69E-04 |
| 33 | GO:0034470: ncRNA processing | 2.69E-04 |
| 34 | GO:0033591: response to L-ascorbic acid | 4.45E-04 |
| 35 | GO:0045493: xylan catabolic process | 4.45E-04 |
| 36 | GO:0006164: purine nucleotide biosynthetic process | 6.38E-04 |
| 37 | GO:0016556: mRNA modification | 6.38E-04 |
| 38 | GO:2001141: regulation of RNA biosynthetic process | 6.38E-04 |
| 39 | GO:0009409: response to cold | 6.40E-04 |
| 40 | GO:0071483: cellular response to blue light | 8.47E-04 |
| 41 | GO:0044205: 'de novo' UMP biosynthetic process | 8.47E-04 |
| 42 | GO:0010236: plastoquinone biosynthetic process | 1.07E-03 |
| 43 | GO:0045038: protein import into chloroplast thylakoid membrane | 1.07E-03 |
| 44 | GO:0016554: cytidine to uridine editing | 1.31E-03 |
| 45 | GO:0009228: thiamine biosynthetic process | 1.31E-03 |
| 46 | GO:0042793: transcription from plastid promoter | 1.31E-03 |
| 47 | GO:0042026: protein refolding | 1.56E-03 |
| 48 | GO:0034389: lipid particle organization | 1.56E-03 |
| 49 | GO:0042372: phylloquinone biosynthetic process | 1.56E-03 |
| 50 | GO:0006458: 'de novo' protein folding | 1.56E-03 |
| 51 | GO:0030488: tRNA methylation | 1.56E-03 |
| 52 | GO:0009772: photosynthetic electron transport in photosystem II | 1.84E-03 |
| 53 | GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process | 1.84E-03 |
| 54 | GO:0010444: guard mother cell differentiation | 1.84E-03 |
| 55 | GO:0006400: tRNA modification | 1.84E-03 |
| 56 | GO:0042255: ribosome assembly | 2.13E-03 |
| 57 | GO:0070413: trehalose metabolism in response to stress | 2.13E-03 |
| 58 | GO:0006402: mRNA catabolic process | 2.13E-03 |
| 59 | GO:0009704: de-etiolation | 2.13E-03 |
| 60 | GO:2000070: regulation of response to water deprivation | 2.13E-03 |
| 61 | GO:0009231: riboflavin biosynthetic process | 2.13E-03 |
| 62 | GO:0045087: innate immune response | 2.18E-03 |
| 63 | GO:0032544: plastid translation | 2.43E-03 |
| 64 | GO:0019432: triglyceride biosynthetic process | 2.74E-03 |
| 65 | GO:0043067: regulation of programmed cell death | 3.07E-03 |
| 66 | GO:1900865: chloroplast RNA modification | 3.07E-03 |
| 67 | GO:0045036: protein targeting to chloroplast | 3.41E-03 |
| 68 | GO:0006949: syncytium formation | 3.41E-03 |
| 69 | GO:0009073: aromatic amino acid family biosynthetic process | 3.76E-03 |
| 70 | GO:0009684: indoleacetic acid biosynthetic process | 3.76E-03 |
| 71 | GO:0005983: starch catabolic process | 4.13E-03 |
| 72 | GO:2000012: regulation of auxin polar transport | 4.50E-03 |
| 73 | GO:0050826: response to freezing | 4.50E-03 |
| 74 | GO:0090351: seedling development | 5.29E-03 |
| 75 | GO:0006071: glycerol metabolic process | 5.70E-03 |
| 76 | GO:0009116: nucleoside metabolic process | 6.12E-03 |
| 77 | GO:0005992: trehalose biosynthetic process | 6.12E-03 |
| 78 | GO:0061077: chaperone-mediated protein folding | 7.00E-03 |
| 79 | GO:0009814: defense response, incompatible interaction | 7.46E-03 |
| 80 | GO:0007005: mitochondrion organization | 7.46E-03 |
| 81 | GO:0031348: negative regulation of defense response | 7.46E-03 |
| 82 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 7.92E-03 |
| 83 | GO:0009306: protein secretion | 8.40E-03 |
| 84 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 8.88E-03 |
| 85 | GO:0008033: tRNA processing | 9.38E-03 |
| 86 | GO:0010197: polar nucleus fusion | 9.89E-03 |
| 87 | GO:0048868: pollen tube development | 9.89E-03 |
| 88 | GO:0009416: response to light stimulus | 1.04E-02 |
| 89 | GO:0007166: cell surface receptor signaling pathway | 1.05E-02 |
| 90 | GO:0008380: RNA splicing | 1.10E-02 |
| 91 | GO:0016032: viral process | 1.20E-02 |
| 92 | GO:0032502: developmental process | 1.20E-02 |
| 93 | GO:0009828: plant-type cell wall loosening | 1.31E-02 |
| 94 | GO:0010027: thylakoid membrane organization | 1.49E-02 |
| 95 | GO:0006974: cellular response to DNA damage stimulus | 1.61E-02 |
| 96 | GO:0015995: chlorophyll biosynthetic process | 1.67E-02 |
| 97 | GO:0010411: xyloglucan metabolic process | 1.67E-02 |
| 98 | GO:0018298: protein-chromophore linkage | 1.80E-02 |
| 99 | GO:0009637: response to blue light | 2.12E-02 |
| 100 | GO:0010114: response to red light | 2.54E-02 |
| 101 | GO:0006397: mRNA processing | 2.74E-02 |
| 102 | GO:0009664: plant-type cell wall organization | 2.99E-02 |
| 103 | GO:0006364: rRNA processing | 3.15E-02 |
| 104 | GO:0006508: proteolysis | 3.39E-02 |
| 105 | GO:0009553: embryo sac development | 3.96E-02 |
| 106 | GO:0009624: response to nematode | 4.04E-02 |
| 107 | GO:0006396: RNA processing | 4.13E-02 |
| 108 | GO:0046686: response to cadmium ion | 4.37E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005363: maltose transmembrane transporter activity | 0.00E+00 |
| 2 | GO:0004643: phosphoribosylaminoimidazolecarboxamide formyltransferase activity | 0.00E+00 |
| 3 | GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity | 0.00E+00 |
| 4 | GO:0061634: alpha-D-xyloside xylohydrolase | 0.00E+00 |
| 5 | GO:0043864: indoleacetamide hydrolase activity | 0.00E+00 |
| 6 | GO:0004588: orotate phosphoribosyltransferase activity | 0.00E+00 |
| 7 | GO:0004590: orotidine-5'-phosphate decarboxylase activity | 0.00E+00 |
| 8 | GO:0080176: xyloglucan 1,6-alpha-xylosidase activity | 0.00E+00 |
| 9 | GO:0003937: IMP cyclohydrolase activity | 0.00E+00 |
| 10 | GO:0016851: magnesium chelatase activity | 6.10E-06 |
| 11 | GO:0016987: sigma factor activity | 1.15E-05 |
| 12 | GO:0001053: plastid sigma factor activity | 1.15E-05 |
| 13 | GO:0003723: RNA binding | 1.40E-05 |
| 14 | GO:0003747: translation release factor activity | 1.11E-04 |
| 15 | GO:0004813: alanine-tRNA ligase activity | 1.16E-04 |
| 16 | GO:0008835: diaminohydroxyphosphoribosylaminopyrimidine deaminase activity | 1.16E-04 |
| 17 | GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity | 1.16E-04 |
| 18 | GO:0005525: GTP binding | 2.20E-04 |
| 19 | GO:0004817: cysteine-tRNA ligase activity | 2.69E-04 |
| 20 | GO:0009977: proton motive force dependent protein transmembrane transporter activity | 2.69E-04 |
| 21 | GO:0046524: sucrose-phosphate synthase activity | 4.45E-04 |
| 22 | GO:0003913: DNA photolyase activity | 4.45E-04 |
| 23 | GO:0004176: ATP-dependent peptidase activity | 4.74E-04 |
| 24 | GO:0016149: translation release factor activity, codon specific | 6.38E-04 |
| 25 | GO:0004045: aminoacyl-tRNA hydrolase activity | 8.47E-04 |
| 26 | GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | 8.47E-04 |
| 27 | GO:0009044: xylan 1,4-beta-xylosidase activity | 8.47E-04 |
| 28 | GO:0046556: alpha-L-arabinofuranosidase activity | 8.47E-04 |
| 29 | GO:0004659: prenyltransferase activity | 8.47E-04 |
| 30 | GO:0003924: GTPase activity | 9.15E-04 |
| 31 | GO:0004040: amidase activity | 1.07E-03 |
| 32 | GO:0008237: metallopeptidase activity | 1.19E-03 |
| 33 | GO:0016597: amino acid binding | 1.26E-03 |
| 34 | GO:0003730: mRNA 3'-UTR binding | 1.56E-03 |
| 35 | GO:0004144: diacylglycerol O-acyltransferase activity | 1.56E-03 |
| 36 | GO:0009881: photoreceptor activity | 1.84E-03 |
| 37 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 1.99E-03 |
| 38 | GO:0004805: trehalose-phosphatase activity | 3.41E-03 |
| 39 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 3.76E-03 |
| 40 | GO:0044183: protein binding involved in protein folding | 3.76E-03 |
| 41 | GO:0003690: double-stranded DNA binding | 3.89E-03 |
| 42 | GO:0042803: protein homodimerization activity | 4.06E-03 |
| 43 | GO:0000049: tRNA binding | 4.13E-03 |
| 44 | GO:0009982: pseudouridine synthase activity | 4.50E-03 |
| 45 | GO:0008266: poly(U) RNA binding | 4.89E-03 |
| 46 | GO:0051082: unfolded protein binding | 5.34E-03 |
| 47 | GO:0004519: endonuclease activity | 5.56E-03 |
| 48 | GO:0102336: 3-oxo-arachidoyl-CoA synthase activity | 5.70E-03 |
| 49 | GO:0102337: 3-oxo-cerotoyl-CoA synthase activity | 5.70E-03 |
| 50 | GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity | 5.70E-03 |
| 51 | GO:0005528: FK506 binding | 6.12E-03 |
| 52 | GO:0051536: iron-sulfur cluster binding | 6.12E-03 |
| 53 | GO:0019843: rRNA binding | 6.67E-03 |
| 54 | GO:0030570: pectate lyase activity | 7.92E-03 |
| 55 | GO:0003727: single-stranded RNA binding | 8.40E-03 |
| 56 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 8.59E-03 |
| 57 | GO:0008536: Ran GTPase binding | 9.89E-03 |
| 58 | GO:0003729: mRNA binding | 1.15E-02 |
| 59 | GO:0016791: phosphatase activity | 1.31E-02 |
| 60 | GO:0000287: magnesium ion binding | 1.40E-02 |
| 61 | GO:0050660: flavin adenine dinucleotide binding | 1.66E-02 |
| 62 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 1.80E-02 |
| 63 | GO:0004222: metalloendopeptidase activity | 1.92E-02 |
| 64 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 2.12E-02 |
| 65 | GO:0003746: translation elongation factor activity | 2.12E-02 |
| 66 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 2.84E-02 |
| 67 | GO:0022857: transmembrane transporter activity | 3.87E-02 |