co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G26710

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0018023: peptidyl-lysine trimethylation	0.00E+00
2	GO:0031054: pre-miRNA processing	0.00E+00
3	GO:0090279: regulation of calcium ion import	0.00E+00
4	GO:0042820: vitamin B6 catabolic process	0.00E+00
5	GO:1903508: positive regulation of nucleic acid-templated transcription	0.00E+00
6	GO:0071474: cellular hyperosmotic response	0.00E+00
7	GO:1902458: positive regulation of stomatal opening	0.00E+00
8	GO:0009249: protein lipoylation	0.00E+00
9	GO:2000505: regulation of energy homeostasis	0.00E+00
10	GO:0002184: cytoplasmic translational termination	0.00E+00
11	GO:0090470: shoot organ boundary specification	0.00E+00
12	GO:0042821: pyridoxal biosynthetic process	0.00E+00
13	GO:0042407: cristae formation	0.00E+00
14	GO:0009106: lipoate metabolic process	0.00E+00
15	GO:0090042: tubulin deacetylation	0.00E+00
16	GO:0045038: protein import into chloroplast thylakoid membrane	6.96E-07
17	GO:1903426: regulation of reactive oxygen species biosynthetic process	3.24E-06
18	GO:0010207: photosystem II assembly	5.02E-05
19	GO:0006655: phosphatidylglycerol biosynthetic process	1.10E-04
20	GO:2000070: regulation of response to water deprivation	2.52E-04
21	GO:0000967: rRNA 5'-end processing	2.65E-04
22	GO:0043266: regulation of potassium ion transport	2.65E-04
23	GO:2000021: regulation of ion homeostasis	2.65E-04
24	GO:0048363: mucilage pectin metabolic process	2.65E-04
25	GO:0000476: maturation of 4.5S rRNA	2.65E-04
26	GO:0009443: pyridoxal 5'-phosphate salvage	2.65E-04
27	GO:0010206: photosystem II repair	3.74E-04
28	GO:1900871: chloroplast mRNA modification	5.83E-04
29	GO:0018026: peptidyl-lysine monomethylation	5.83E-04
30	GO:0071668: plant-type cell wall assembly	5.83E-04
31	GO:0080183: response to photooxidative stress	5.83E-04
32	GO:0080185: effector dependent induction by symbiont of host immune response	5.83E-04
33	GO:0051262: protein tetramerization	5.83E-04
34	GO:0034470: ncRNA processing	5.83E-04
35	GO:0006423: cysteinyl-tRNA aminoacylation	5.83E-04
36	GO:0006435: threonyl-tRNA aminoacylation	5.83E-04
37	GO:0009089: lysine biosynthetic process via diaminopimelate	5.99E-04
38	GO:0016024: CDP-diacylglycerol biosynthetic process	6.85E-04
39	GO:0045037: protein import into chloroplast stroma	6.85E-04
40	GO:0015979: photosynthesis	8.06E-04
41	GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition	9.47E-04
42	GO:0010589: leaf proximal/distal pattern formation	9.47E-04
43	GO:0045493: xylan catabolic process	9.47E-04
44	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	1.35E-03
45	GO:0010371: regulation of gibberellin biosynthetic process	1.35E-03
46	GO:0009102: biotin biosynthetic process	1.35E-03
47	GO:0046653: tetrahydrofolate metabolic process	1.35E-03
48	GO:0071483: cellular response to blue light	1.81E-03
49	GO:2000306: positive regulation of photomorphogenesis	1.81E-03
50	GO:0035279: mRNA cleavage involved in gene silencing by miRNA	1.81E-03
51	GO:0022622: root system development	1.81E-03
52	GO:0009306: protein secretion	1.87E-03
53	GO:0009107: lipoate biosynthetic process	2.31E-03
54	GO:0016123: xanthophyll biosynthetic process	2.31E-03
55	GO:0010190: cytochrome b6f complex assembly	2.85E-03
56	GO:0016554: cytidine to uridine editing	2.85E-03
57	GO:0045962: positive regulation of development, heterochronic	2.85E-03
58	GO:0030488: tRNA methylation	3.43E-03
59	GO:0035196: production of miRNAs involved in gene silencing by miRNA	4.04E-03
60	GO:0032880: regulation of protein localization	4.04E-03
61	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	4.04E-03
62	GO:0010027: thylakoid membrane organization	4.19E-03
63	GO:0009627: systemic acquired resistance	4.68E-03
64	GO:0006875: cellular metal ion homeostasis	4.69E-03
65	GO:0006605: protein targeting	4.69E-03
66	GO:0016559: peroxisome fission	4.69E-03
67	GO:0048564: photosystem I assembly	4.69E-03
68	GO:0055114: oxidation-reduction process	5.22E-03
69	GO:0032544: plastid translation	5.37E-03
70	GO:0071482: cellular response to light stimulus	5.37E-03
71	GO:0022900: electron transport chain	5.37E-03
72	GO:0015996: chlorophyll catabolic process	5.37E-03
73	GO:0007186: G-protein coupled receptor signaling pathway	5.37E-03
74	GO:0009821: alkaloid biosynthetic process	6.09E-03
75	GO:0007568: aging	6.32E-03
76	GO:1900426: positive regulation of defense response to bacterium	6.83E-03
77	GO:0043067: regulation of programmed cell death	6.83E-03
78	GO:0006779: porphyrin-containing compound biosynthetic process	6.83E-03
79	GO:1900865: chloroplast RNA modification	6.83E-03
80	GO:0048354: mucilage biosynthetic process involved in seed coat development	6.83E-03
81	GO:0010267: production of ta-siRNAs involved in RNA interference	6.83E-03
82	GO:0006782: protoporphyrinogen IX biosynthetic process	7.61E-03
83	GO:0006631: fatty acid metabolic process	8.24E-03
84	GO:1903507: negative regulation of nucleic acid-templated transcription	8.42E-03
85	GO:0006352: DNA-templated transcription, initiation	8.42E-03
86	GO:0018119: peptidyl-cysteine S-nitrosylation	8.42E-03
87	GO:0009773: photosynthetic electron transport in photosystem I	8.42E-03
88	GO:0008285: negative regulation of cell proliferation	8.42E-03
89	GO:0019684: photosynthesis, light reaction	8.42E-03
90	GO:0005983: starch catabolic process	9.26E-03
91	GO:0009725: response to hormone	1.01E-02
92	GO:2000012: regulation of auxin polar transport	1.01E-02
93	GO:0009658: chloroplast organization	1.03E-02
94	GO:0010020: chloroplast fission	1.10E-02
95	GO:0042538: hyperosmotic salinity response	1.12E-02
96	GO:0090351: seedling development	1.20E-02
97	GO:0009768: photosynthesis, light harvesting in photosystem I	1.49E-02
98	GO:0010073: meristem maintenance	1.49E-02
99	GO:0016575: histone deacetylation	1.49E-02
100	GO:0016998: cell wall macromolecule catabolic process	1.59E-02
101	GO:0061077: chaperone-mediated protein folding	1.59E-02
102	GO:2000022: regulation of jasmonic acid mediated signaling pathway	1.70E-02
103	GO:0080092: regulation of pollen tube growth	1.70E-02
104	GO:0019748: secondary metabolic process	1.70E-02
105	GO:0010227: floral organ abscission	1.81E-02
106	GO:0008284: positive regulation of cell proliferation	2.03E-02
107	GO:0016117: carotenoid biosynthetic process	2.03E-02
108	GO:0000271: polysaccharide biosynthetic process	2.15E-02
109	GO:0010305: leaf vascular tissue pattern formation	2.26E-02
110	GO:0010197: polar nucleus fusion	2.26E-02
111	GO:0010182: sugar mediated signaling pathway	2.26E-02
112	GO:0045489: pectin biosynthetic process	2.26E-02
113	GO:0009958: positive gravitropism	2.26E-02
114	GO:0010183: pollen tube guidance	2.51E-02
115	GO:0030163: protein catabolic process	2.88E-02
116	GO:0007623: circadian rhythm	2.98E-02
117	GO:0010286: heat acclimation	3.15E-02
118	GO:0016126: sterol biosynthetic process	3.42E-02
119	GO:0010411: xyloglucan metabolic process	3.84E-02
120	GO:0015995: chlorophyll biosynthetic process	3.84E-02
121	GO:0016311: dephosphorylation	3.98E-02
122	GO:0018298: protein-chromophore linkage	4.13E-02
123	GO:0009817: defense response to fungus, incompatible interaction	4.13E-02
124	GO:0009813: flavonoid biosynthetic process	4.28E-02
125	GO:0048527: lateral root development	4.58E-02
126	GO:0042254: ribosome biogenesis	4.68E-02
127	GO:0009793: embryo development ending in seed dormancy	4.83E-02
128	GO:0016051: carbohydrate biosynthetic process	4.88E-02
129	GO:0009637: response to blue light	4.88E-02

Rank	GO Term	Adjusted P value
1	GO:0008115: sarcosine oxidase activity	0.00E+00
2	GO:0050613: delta14-sterol reductase activity	0.00E+00
3	GO:0043014: alpha-tubulin binding	0.00E+00
4	GO:0080176: xyloglucan 1,6-alpha-xylosidase activity	0.00E+00
5	GO:0003858: 3-hydroxybutyrate dehydrogenase activity	0.00E+00
6	GO:0036033: mediator complex binding	0.00E+00
7	GO:0033819: lipoyl(octanoyl) transferase activity	0.00E+00
8	GO:0005048: signal sequence binding	0.00E+00
9	GO:0004076: biotin synthase activity	0.00E+00
10	GO:0050236: pyridoxine:NADP 4-dehydrogenase activity	0.00E+00
11	GO:0051721: protein phosphatase 2A binding	0.00E+00
12	GO:0042903: tubulin deacetylase activity	0.00E+00
13	GO:0061634: alpha-D-xyloside xylohydrolase	0.00E+00
14	GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase	3.24E-06
15	GO:0030267: glyoxylate reductase (NADP) activity	1.17E-05
16	GO:0070402: NADPH binding	1.17E-05
17	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	1.51E-04
18	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	2.16E-04
19	GO:0004856: xylulokinase activity	2.65E-04
20	GO:0009496: plastoquinol--plastocyanin reductase activity	2.65E-04
21	GO:0015088: copper uptake transmembrane transporter activity	2.65E-04
22	GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity	2.65E-04
23	GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity	2.65E-04
24	GO:0005227: calcium activated cation channel activity	2.65E-04
25	GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity	2.65E-04
26	GO:0004829: threonine-tRNA ligase activity	5.83E-04
27	GO:0010291: carotene beta-ring hydroxylase activity	5.83E-04
28	GO:0017118: lipoyltransferase activity	5.83E-04
29	GO:0009977: proton motive force dependent protein transmembrane transporter activity	5.83E-04
30	GO:0016415: octanoyltransferase activity	5.83E-04
31	GO:0004817: cysteine-tRNA ligase activity	5.83E-04
32	GO:0005504: fatty acid binding	9.47E-04
33	GO:0003955: NAD(P)H dehydrogenase (quinone) activity	9.47E-04
34	GO:0008265: Mo-molybdopterin cofactor sulfurase activity	9.47E-04
35	GO:0003913: DNA photolyase activity	9.47E-04
36	GO:0005528: FK506 binding	1.20E-03
37	GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	1.35E-03
38	GO:0016851: magnesium chelatase activity	1.35E-03
39	GO:0048487: beta-tubulin binding	1.35E-03
40	GO:0043023: ribosomal large subunit binding	1.35E-03
41	GO:0035198: miRNA binding	1.35E-03
42	GO:0045430: chalcone isomerase activity	1.81E-03
43	GO:0009044: xylan 1,4-beta-xylosidase activity	1.81E-03
44	GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity	1.81E-03
45	GO:0046556: alpha-L-arabinofuranosidase activity	1.81E-03
46	GO:0016279: protein-lysine N-methyltransferase activity	1.81E-03
47	GO:0001053: plastid sigma factor activity	1.81E-03
48	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	1.81E-03
49	GO:0004045: aminoacyl-tRNA hydrolase activity	1.81E-03
50	GO:0016987: sigma factor activity	1.81E-03
51	GO:0016491: oxidoreductase activity	1.95E-03
52	GO:0016788: hydrolase activity, acting on ester bonds	2.21E-03
53	GO:0030151: molybdenum ion binding	2.31E-03
54	GO:0016773: phosphotransferase activity, alcohol group as acceptor	2.31E-03
55	GO:0004040: amidase activity	2.31E-03
56	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	2.85E-03
57	GO:0042578: phosphoric ester hydrolase activity	2.85E-03
58	GO:0048038: quinone binding	2.90E-03
59	GO:0005509: calcium ion binding	3.09E-03
60	GO:0004017: adenylate kinase activity	3.43E-03
61	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	3.43E-03
62	GO:0051920: peroxiredoxin activity	3.43E-03
63	GO:0016832: aldehyde-lyase activity	3.43E-03
64	GO:0005261: cation channel activity	3.43E-03
65	GO:0009881: photoreceptor activity	4.04E-03
66	GO:0043022: ribosome binding	4.69E-03
67	GO:0016209: antioxidant activity	4.69E-03
68	GO:0008312: 7S RNA binding	4.69E-03
69	GO:0004033: aldo-keto reductase (NADP) activity	4.69E-03
70	GO:0008236: serine-type peptidase activity	5.20E-03
71	GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific)	5.37E-03
72	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	6.32E-03
73	GO:0016844: strictosidine synthase activity	6.83E-03
74	GO:0005381: iron ion transmembrane transporter activity	6.83E-03
75	GO:0003993: acid phosphatase activity	7.24E-03
76	GO:0005089: Rho guanyl-nucleotide exchange factor activity	8.42E-03
77	GO:0051537: 2 iron, 2 sulfur cluster binding	9.68E-03
78	GO:0004022: alcohol dehydrogenase (NAD) activity	1.01E-02
79	GO:0031072: heat shock protein binding	1.01E-02
80	GO:0003725: double-stranded RNA binding	1.01E-02
81	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	1.10E-02
82	GO:0008083: growth factor activity	1.10E-02
83	GO:0031409: pigment binding	1.29E-02
84	GO:0051536: iron-sulfur cluster binding	1.39E-02
85	GO:0004857: enzyme inhibitor activity	1.39E-02
86	GO:0004407: histone deacetylase activity	1.39E-02
87	GO:0003714: transcription corepressor activity	1.39E-02
88	GO:0052689: carboxylic ester hydrolase activity	1.53E-02
89	GO:0004176: ATP-dependent peptidase activity	1.59E-02
90	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	1.70E-02
91	GO:0016746: transferase activity, transferring acyl groups	1.78E-02
92	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	1.95E-02
93	GO:0008080: N-acetyltransferase activity	2.26E-02
94	GO:0030170: pyridoxal phosphate binding	2.40E-02
95	GO:0004252: serine-type endopeptidase activity	2.40E-02
96	GO:0004872: receptor activity	2.51E-02
97	GO:0005525: GTP binding	2.70E-02
98	GO:0008017: microtubule binding	3.12E-02
99	GO:0008483: transaminase activity	3.15E-02
100	GO:0016168: chlorophyll binding	3.56E-02
101	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	4.13E-02
102	GO:0015238: drug transmembrane transporter activity	4.28E-02
103	GO:0004222: metalloendopeptidase activity	4.43E-02
104	GO:0003746: translation elongation factor activity	4.88E-02
105	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	4.88E-02