Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G26570

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0034337: RNA folding0.00E+00
2GO:0006982: response to lipid hydroperoxide0.00E+00
3GO:0010335: response to non-ionic osmotic stress0.00E+00
4GO:1902171: regulation of tocopherol cyclase activity0.00E+00
5GO:1901918: negative regulation of exoribonuclease activity0.00E+00
6GO:0016553: base conversion or substitution editing0.00E+00
7GO:0033494: ferulate metabolic process0.00E+00
8GO:2000042: negative regulation of double-strand break repair via homologous recombination0.00E+00
9GO:0009661: chromoplast organization0.00E+00
10GO:0046471: phosphatidylglycerol metabolic process0.00E+00
11GO:0052865: 1-deoxy-D-xylulose 5-phosphate biosynthetic process0.00E+00
12GO:1905157: positive regulation of photosynthesis0.00E+00
13GO:0015995: chlorophyll biosynthetic process6.17E-10
14GO:0055114: oxidation-reduction process6.94E-07
15GO:0006094: gluconeogenesis3.45E-06
16GO:0010207: photosystem II assembly1.22E-04
17GO:0010143: cutin biosynthetic process1.22E-04
18GO:0006636: unsaturated fatty acid biosynthetic process1.70E-04
19GO:0009658: chloroplast organization2.74E-04
20GO:0019510: S-adenosylhomocysteine catabolic process3.97E-04
21GO:0051180: vitamin transport3.97E-04
22GO:0010362: negative regulation of anion channel activity by blue light3.97E-04
23GO:0015969: guanosine tetraphosphate metabolic process3.97E-04
24GO:0030974: thiamine pyrophosphate transport3.97E-04
25GO:0046467: membrane lipid biosynthetic process3.97E-04
26GO:0031426: polycistronic mRNA processing3.97E-04
27GO:0043489: RNA stabilization3.97E-04
28GO:0000481: maturation of 5S rRNA3.97E-04
29GO:0043953: protein transport by the Tat complex3.97E-04
30GO:0010426: DNA methylation on cytosine within a CHH sequence3.97E-04
31GO:0065002: intracellular protein transmembrane transport3.97E-04
32GO:0043087: regulation of GTPase activity3.97E-04
33GO:0071461: cellular response to redox state3.97E-04
34GO:1902025: nitrate import3.97E-04
35GO:0071277: cellular response to calcium ion3.97E-04
36GO:0046167: glycerol-3-phosphate biosynthetic process3.97E-04
37GO:0043007: maintenance of rDNA3.97E-04
38GO:0090548: response to nitrate starvation3.97E-04
39GO:1902458: positive regulation of stomatal opening3.97E-04
40GO:0016559: peroxisome fission4.58E-04
41GO:0009704: de-etiolation4.58E-04
42GO:0050821: protein stabilization4.58E-04
43GO:0006520: cellular amino acid metabolic process5.03E-04
44GO:0044550: secondary metabolite biosynthetic process5.14E-04
45GO:0019252: starch biosynthetic process6.04E-04
46GO:0006098: pentose-phosphate shunt6.69E-04
47GO:1903426: regulation of reactive oxygen species biosynthetic process8.60E-04
48GO:0015790: UDP-xylose transport8.60E-04
49GO:0030388: fructose 1,6-bisphosphate metabolic process8.60E-04
50GO:0080005: photosystem stoichiometry adjustment8.60E-04
51GO:0033353: S-adenosylmethionine cycle8.60E-04
52GO:0042819: vitamin B6 biosynthetic process8.60E-04
53GO:0010541: acropetal auxin transport8.60E-04
54GO:1904143: positive regulation of carotenoid biosynthetic process8.60E-04
55GO:0015893: drug transport8.60E-04
56GO:0006650: glycerophospholipid metabolic process8.60E-04
57GO:0010155: regulation of proton transport8.60E-04
58GO:0006096: glycolytic process9.02E-04
59GO:0071555: cell wall organization1.32E-03
60GO:0006000: fructose metabolic process1.40E-03
61GO:0046168: glycerol-3-phosphate catabolic process1.40E-03
62GO:0044375: regulation of peroxisome size1.40E-03
63GO:0010160: formation of animal organ boundary1.40E-03
64GO:0006081: cellular aldehyde metabolic process1.40E-03
65GO:0046621: negative regulation of organ growth1.40E-03
66GO:0010025: wax biosynthetic process1.93E-03
67GO:0009152: purine ribonucleotide biosynthetic process2.02E-03
68GO:0046653: tetrahydrofolate metabolic process2.02E-03
69GO:0010239: chloroplast mRNA processing2.02E-03
70GO:0033014: tetrapyrrole biosynthetic process2.02E-03
71GO:0008615: pyridoxine biosynthetic process2.02E-03
72GO:0043481: anthocyanin accumulation in tissues in response to UV light2.02E-03
73GO:0006072: glycerol-3-phosphate metabolic process2.02E-03
74GO:2001141: regulation of RNA biosynthetic process2.02E-03
75GO:0042823: pyridoxal phosphate biosynthetic process2.02E-03
76GO:0006631: fatty acid metabolic process2.46E-03
77GO:0015689: molybdate ion transport2.71E-03
78GO:0019464: glycine decarboxylation via glycine cleavage system2.71E-03
79GO:0015994: chlorophyll metabolic process2.71E-03
80GO:0006546: glycine catabolic process2.71E-03
81GO:0010600: regulation of auxin biosynthetic process2.71E-03
82GO:0010021: amylopectin biosynthetic process2.71E-03
83GO:0042546: cell wall biogenesis2.88E-03
84GO:0019722: calcium-mediated signaling3.37E-03
85GO:0016123: xanthophyll biosynthetic process3.47E-03
86GO:0006465: signal peptide processing3.47E-03
87GO:0006564: L-serine biosynthetic process3.47E-03
88GO:0009904: chloroplast accumulation movement3.47E-03
89GO:0045038: protein import into chloroplast thylakoid membrane3.47E-03
90GO:0016120: carotene biosynthetic process3.47E-03
91GO:0009107: lipoate biosynthetic process3.47E-03
92GO:0045489: pectin biosynthetic process4.26E-03
93GO:0010182: sugar mediated signaling pathway4.26E-03
94GO:0042549: photosystem II stabilization4.29E-03
95GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway4.29E-03
96GO:0060918: auxin transport4.29E-03
97GO:0009920: cell plate formation involved in plant-type cell wall biogenesis4.29E-03
98GO:0009643: photosynthetic acclimation4.29E-03
99GO:0009228: thiamine biosynthetic process4.29E-03
100GO:0009791: post-embryonic development4.91E-03
101GO:0017148: negative regulation of translation5.17E-03
102GO:0010244: response to low fluence blue light stimulus by blue low-fluence system5.17E-03
103GO:0009903: chloroplast avoidance movement5.17E-03
104GO:0010189: vitamin E biosynthetic process5.17E-03
105GO:0009554: megasporogenesis5.17E-03
106GO:1901259: chloroplast rRNA processing5.17E-03
107GO:0000054: ribosomal subunit export from nucleus5.17E-03
108GO:0010019: chloroplast-nucleus signaling pathway5.17E-03
109GO:0007264: small GTPase mediated signal transduction5.62E-03
110GO:0032502: developmental process5.62E-03
111GO:0010161: red light signaling pathway6.11E-03
112GO:1900056: negative regulation of leaf senescence6.11E-03
113GO:1900057: positive regulation of leaf senescence6.11E-03
114GO:0048437: floral organ development6.11E-03
115GO:0006400: tRNA modification6.11E-03
116GO:0050829: defense response to Gram-negative bacterium6.11E-03
117GO:0006396: RNA processing6.51E-03
118GO:0007267: cell-cell signaling6.78E-03
119GO:0007155: cell adhesion7.10E-03
120GO:0010928: regulation of auxin mediated signaling pathway7.10E-03
121GO:0009690: cytokinin metabolic process7.10E-03
122GO:0032508: DNA duplex unwinding7.10E-03
123GO:2000070: regulation of response to water deprivation7.10E-03
124GO:0042255: ribosome assembly7.10E-03
125GO:0006353: DNA-templated transcription, termination7.10E-03
126GO:0000105: histidine biosynthetic process7.10E-03
127GO:0010027: thylakoid membrane organization7.61E-03
128GO:0009932: cell tip growth8.15E-03
129GO:0006002: fructose 6-phosphate metabolic process8.15E-03
130GO:0071482: cellular response to light stimulus8.15E-03
131GO:0015996: chlorophyll catabolic process8.15E-03
132GO:0006526: arginine biosynthetic process8.15E-03
133GO:0007186: G-protein coupled receptor signaling pathway8.15E-03
134GO:0009657: plastid organization8.15E-03
135GO:0010411: xyloglucan metabolic process8.98E-03
136GO:0009821: alkaloid biosynthetic process9.25E-03
137GO:0051865: protein autoubiquitination9.25E-03
138GO:0090305: nucleic acid phosphodiester bond hydrolysis9.25E-03
139GO:0090333: regulation of stomatal closure9.25E-03
140GO:0006783: heme biosynthetic process9.25E-03
141GO:0006754: ATP biosynthetic process9.25E-03
142GO:0048507: meristem development9.25E-03
143GO:0010205: photoinhibition1.04E-02
144GO:0009638: phototropism1.04E-02
145GO:0006779: porphyrin-containing compound biosynthetic process1.04E-02
146GO:0010380: regulation of chlorophyll biosynthetic process1.04E-02
147GO:0006811: ion transport1.10E-02
148GO:0006633: fatty acid biosynthetic process1.12E-02
149GO:0007568: aging1.15E-02
150GO:0010215: cellulose microfibril organization1.16E-02
151GO:0009688: abscisic acid biosynthetic process1.16E-02
152GO:0043069: negative regulation of programmed cell death1.16E-02
153GO:0009641: shade avoidance1.16E-02
154GO:0007623: circadian rhythm1.26E-02
155GO:0016051: carbohydrate biosynthetic process1.27E-02
156GO:0009637: response to blue light1.27E-02
157GO:0043085: positive regulation of catalytic activity1.29E-02
158GO:0009773: photosynthetic electron transport in photosystem I1.29E-02
159GO:0006352: DNA-templated transcription, initiation1.29E-02
160GO:0016485: protein processing1.29E-02
161GO:0006415: translational termination1.29E-02
162GO:0009408: response to heat1.34E-02
163GO:0008361: regulation of cell size1.42E-02
164GO:0016024: CDP-diacylglycerol biosynthetic process1.42E-02
165GO:0045037: protein import into chloroplast stroma1.42E-02
166GO:0009725: response to hormone1.55E-02
167GO:0009767: photosynthetic electron transport chain1.55E-02
168GO:0005986: sucrose biosynthetic process1.55E-02
169GO:0030048: actin filament-based movement1.55E-02
170GO:0009785: blue light signaling pathway1.55E-02
171GO:0018107: peptidyl-threonine phosphorylation1.55E-02
172GO:0009718: anthocyanin-containing compound biosynthetic process1.55E-02
173GO:0010114: response to red light1.64E-02
174GO:0010540: basipetal auxin transport1.69E-02
175GO:0009266: response to temperature stimulus1.69E-02
176GO:0034605: cellular response to heat1.69E-02
177GO:0010020: chloroplast fission1.69E-02
178GO:0010223: secondary shoot formation1.69E-02
179GO:0019253: reductive pentose-phosphate cycle1.69E-02
180GO:0007031: peroxisome organization1.83E-02
181GO:0042343: indole glucosinolate metabolic process1.83E-02
182GO:0009825: multidimensional cell growth1.83E-02
183GO:0006833: water transport1.98E-02
184GO:0019762: glucosinolate catabolic process1.98E-02
185GO:0009833: plant-type primary cell wall biogenesis1.98E-02
186GO:0042538: hyperosmotic salinity response2.06E-02
187GO:0009585: red, far-red light phototransduction2.21E-02
188GO:0006857: oligopeptide transport2.37E-02
189GO:0098542: defense response to other organism2.44E-02
190GO:0010431: seed maturation2.44E-02
191GO:0006810: transport2.44E-02
192GO:0061077: chaperone-mediated protein folding2.44E-02
193GO:0031408: oxylipin biosynthetic process2.44E-02
194GO:0016114: terpenoid biosynthetic process2.44E-02
195GO:0006306: DNA methylation2.44E-02
196GO:0005975: carbohydrate metabolic process2.60E-02
197GO:0016226: iron-sulfur cluster assembly2.61E-02
198GO:0010017: red or far-red light signaling pathway2.61E-02
199GO:0043086: negative regulation of catalytic activity2.61E-02
200GO:0030433: ubiquitin-dependent ERAD pathway2.61E-02
201GO:0006730: one-carbon metabolic process2.61E-02
202GO:0019748: secondary metabolic process2.61E-02
203GO:0046686: response to cadmium ion2.73E-02
204GO:0009294: DNA mediated transformation2.77E-02
205GO:0048443: stamen development2.94E-02
206GO:0009306: protein secretion2.94E-02
207GO:0034220: ion transmembrane transport3.29E-02
208GO:0015979: photosynthesis3.39E-02
209GO:0009741: response to brassinosteroid3.48E-02
210GO:0009958: positive gravitropism3.48E-02
211GO:0007059: chromosome segregation3.66E-02
212GO:0009646: response to absence of light3.66E-02
213GO:0008654: phospholipid biosynthetic process3.85E-02
214GO:0009058: biosynthetic process4.14E-02
215GO:0010583: response to cyclopentenone4.23E-02
216GO:0032259: methylation4.41E-02
217GO:0009567: double fertilization forming a zygote and endosperm4.63E-02
218GO:0009639: response to red or far red light4.63E-02
219GO:0009737: response to abscisic acid4.83E-02
220GO:0006397: mRNA processing4.89E-02
RankGO TermAdjusted P value
1GO:0035798: 2-alkenal reductase (NADP+) activity0.00E+00
2GO:0009540: zeaxanthin epoxidase [overall] activity0.00E+00
3GO:0052637: delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase activity0.00E+00
4GO:0046406: magnesium protoporphyrin IX methyltransferase activity0.00E+00
5GO:0036361: racemase activity, acting on amino acids and derivatives0.00E+00
6GO:0045550: geranylgeranyl reductase activity0.00E+00
7GO:0009979: 16:0 monogalactosyldiacylglycerol desaturase activity0.00E+00
8GO:0050278: sedoheptulose-bisphosphatase activity0.00E+00
9GO:0016855: racemase and epimerase activity, acting on amino acids and derivatives0.00E+00
10GO:0033840: NDP-glucose-starch glucosyltransferase activity0.00E+00
11GO:0008942: nitrite reductase [NAD(P)H] activity0.00E+00
12GO:0004332: fructose-bisphosphate aldolase activity3.87E-06
13GO:0018708: thiol S-methyltransferase activity7.04E-06
14GO:0004373: glycogen (starch) synthase activity2.45E-05
15GO:0048027: mRNA 5'-UTR binding5.35E-05
16GO:0016491: oxidoreductase activity7.53E-05
17GO:0009011: starch synthase activity9.42E-05
18GO:0000293: ferric-chelate reductase activity2.10E-04
19GO:0035671: enone reductase activity3.97E-04
20GO:0008886: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity3.97E-04
21GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity3.97E-04
22GO:0046906: tetrapyrrole binding3.97E-04
23GO:0047259: glucomannan 4-beta-mannosyltransferase activity3.97E-04
24GO:0090422: thiamine pyrophosphate transporter activity3.97E-04
25GO:0004013: adenosylhomocysteinase activity3.97E-04
26GO:0080132: fatty acid alpha-hydroxylase activity3.97E-04
27GO:0004325: ferrochelatase activity3.97E-04
28GO:0004328: formamidase activity3.97E-04
29GO:0003879: ATP phosphoribosyltransferase activity3.97E-04
30GO:0010313: phytochrome binding3.97E-04
31GO:0031957: very long-chain fatty acid-CoA ligase activity3.97E-04
32GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water5.59E-04
33GO:0051287: NAD binding5.94E-04
34GO:0071949: FAD binding6.69E-04
35GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity7.90E-04
36GO:0009977: proton motive force dependent protein transmembrane transporter activity8.60E-04
37GO:0004617: phosphoglycerate dehydrogenase activity8.60E-04
38GO:0008661: 1-deoxy-D-xylulose-5-phosphate synthase activity8.60E-04
39GO:0033201: alpha-1,4-glucan synthase activity8.60E-04
40GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity8.60E-04
41GO:0043024: ribosomal small subunit binding8.60E-04
42GO:0008728: GTP diphosphokinase activity8.60E-04
43GO:0005464: UDP-xylose transmembrane transporter activity8.60E-04
44GO:0036381: pyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity8.60E-04
45GO:0080045: quercetin 3'-O-glucosyltransferase activity8.60E-04
46GO:0048531: beta-1,3-galactosyltransferase activity8.60E-04
47GO:0042389: omega-3 fatty acid desaturase activity8.60E-04
48GO:0042802: identical protein binding8.85E-04
49GO:0003729: mRNA binding1.19E-03
50GO:0004565: beta-galactosidase activity1.37E-03
51GO:0010277: chlorophyllide a oxygenase [overall] activity1.40E-03
52GO:0050734: hydroxycinnamoyltransferase activity1.40E-03
53GO:0016992: lipoate synthase activity1.40E-03
54GO:0016742: hydroxymethyl-, formyl- and related transferase activity1.40E-03
55GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity1.40E-03
56GO:0004030: aldehyde dehydrogenase [NAD(P)+] activity1.40E-03
57GO:0008864: formyltetrahydrofolate deformylase activity1.40E-03
58GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor1.40E-03
59GO:0004375: glycine dehydrogenase (decarboxylating) activity2.02E-03
60GO:0022890: inorganic cation transmembrane transporter activity2.02E-03
61GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides2.02E-03
62GO:0009882: blue light photoreceptor activity2.02E-03
63GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor2.02E-03
64GO:0016851: magnesium chelatase activity2.02E-03
65GO:0001053: plastid sigma factor activity2.71E-03
66GO:0016987: sigma factor activity2.71E-03
67GO:0042277: peptide binding2.71E-03
68GO:0015098: molybdate ion transmembrane transporter activity2.71E-03
69GO:0004672: protein kinase activity3.30E-03
70GO:0003727: single-stranded RNA binding3.37E-03
71GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen3.47E-03
72GO:0005506: iron ion binding3.87E-03
73GO:0080046: quercetin 4'-O-glucosyltransferase activity4.29E-03
74GO:0004029: aldehyde dehydrogenase (NAD) activity4.29E-03
75GO:0035673: oligopeptide transmembrane transporter activity4.29E-03
76GO:0004366: glycerol-3-phosphate O-acyltransferase activity4.29E-03
77GO:0042578: phosphoric ester hydrolase activity4.29E-03
78GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity4.29E-03
79GO:0051753: mannan synthase activity5.17E-03
80GO:0003730: mRNA 3'-UTR binding5.17E-03
81GO:0102391: decanoate--CoA ligase activity5.17E-03
82GO:0003886: DNA (cytosine-5-)-methyltransferase activity5.17E-03
83GO:0016762: xyloglucan:xyloglucosyl transferase activity5.26E-03
84GO:0004518: nuclease activity5.62E-03
85GO:0019899: enzyme binding6.11E-03
86GO:0004467: long-chain fatty acid-CoA ligase activity6.11E-03
87GO:0005525: GTP binding7.85E-03
88GO:0008135: translation factor activity, RNA binding8.15E-03
89GO:0016798: hydrolase activity, acting on glycosyl bonds8.98E-03
90GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism9.25E-03
91GO:0016757: transferase activity, transferring glycosyl groups9.82E-03
92GO:0004743: pyruvate kinase activity1.04E-02
93GO:0030955: potassium ion binding1.04E-02
94GO:0016844: strictosidine synthase activity1.04E-02
95GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen1.10E-02
96GO:0046910: pectinesterase inhibitor activity1.15E-02
97GO:0003746: translation elongation factor activity1.27E-02
98GO:0015386: potassium:proton antiporter activity1.29E-02
99GO:0015198: oligopeptide transporter activity1.42E-02
100GO:0010329: auxin efflux transmembrane transporter activity1.55E-02
101GO:0031072: heat shock protein binding1.55E-02
102GO:0000155: phosphorelay sensor kinase activity1.55E-02
103GO:0003774: motor activity1.69E-02
104GO:0031624: ubiquitin conjugating enzyme binding1.69E-02
105GO:0008266: poly(U) RNA binding1.69E-02
106GO:0042626: ATPase activity, coupled to transmembrane movement of substances1.71E-02
107GO:0051537: 2 iron, 2 sulfur cluster binding1.77E-02
108GO:0035091: phosphatidylinositol binding1.77E-02
109GO:0003755: peptidyl-prolyl cis-trans isomerase activity1.91E-02
110GO:0005528: FK506 binding2.13E-02
111GO:0051536: iron-sulfur cluster binding2.13E-02
112GO:0015079: potassium ion transmembrane transporter activity2.29E-02
113GO:0003690: double-stranded DNA binding2.29E-02
114GO:0016887: ATPase activity2.58E-02
115GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity2.61E-02
116GO:0016760: cellulose synthase (UDP-forming) activity2.77E-02
117GO:0016874: ligase activity2.96E-02
118GO:0052689: carboxylic ester hydrolase activity3.25E-02
119GO:0008080: N-acetyltransferase activity3.48E-02
120GO:0015299: solute:proton antiporter activity3.66E-02
121GO:0010181: FMN binding3.66E-02
122GO:0004871: signal transducer activity3.81E-02
123GO:0004872: receptor activity3.85E-02
124GO:0019843: rRNA binding3.93E-02
125GO:0005515: protein binding4.18E-02
126GO:0016791: phosphatase activity4.63E-02
127GO:0016759: cellulose synthase activity4.63E-02
128GO:0003924: GTPase activity4.65E-02
129GO:0005524: ATP binding4.80E-02
130GO:0016722: oxidoreductase activity, oxidizing metal ions4.83E-02
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Gene type



Gene DE type