GO Enrichment Analysis of Co-expressed Genes with
AT3G24560
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0048263: determination of dorsal identity | 0.00E+00 |
| 2 | GO:1901528: hydrogen peroxide mediated signaling pathway involved in stomatal movement | 0.00E+00 |
| 3 | GO:0080127: fruit septum development | 0.00E+00 |
| 4 | GO:0019988: charged-tRNA amino acid modification | 0.00E+00 |
| 5 | GO:0008064: regulation of actin polymerization or depolymerization | 0.00E+00 |
| 6 | GO:0051493: regulation of cytoskeleton organization | 0.00E+00 |
| 7 | GO:0045014: negative regulation of transcription by glucose | 0.00E+00 |
| 8 | GO:0071951: conversion of methionyl-tRNA to N-formyl-methionyl-tRNA | 0.00E+00 |
| 9 | GO:0042255: ribosome assembly | 1.67E-04 |
| 10 | GO:0036228: protein targeting to nuclear inner membrane | 2.02E-04 |
| 11 | GO:0033206: meiotic cytokinesis | 2.02E-04 |
| 12 | GO:0006390: transcription from mitochondrial promoter | 2.02E-04 |
| 13 | GO:0006264: mitochondrial DNA replication | 2.02E-04 |
| 14 | GO:0033259: plastid DNA replication | 2.02E-04 |
| 15 | GO:0006430: lysyl-tRNA aminoacylation | 2.02E-04 |
| 16 | GO:0006999: nuclear pore organization | 2.02E-04 |
| 17 | GO:1901529: positive regulation of anion channel activity | 4.52E-04 |
| 18 | GO:2000071: regulation of defense response by callose deposition | 4.52E-04 |
| 19 | GO:0010152: pollen maturation | 4.70E-04 |
| 20 | GO:0009887: animal organ morphogenesis | 6.01E-04 |
| 21 | GO:1901527: abscisic acid-activated signaling pathway involved in stomatal movement | 7.36E-04 |
| 22 | GO:1904278: positive regulation of wax biosynthetic process | 7.36E-04 |
| 23 | GO:0033169: histone H3-K9 demethylation | 1.05E-03 |
| 24 | GO:0009102: biotin biosynthetic process | 1.05E-03 |
| 25 | GO:0009152: purine ribonucleotide biosynthetic process | 1.05E-03 |
| 26 | GO:0007276: gamete generation | 1.05E-03 |
| 27 | GO:0043481: anthocyanin accumulation in tissues in response to UV light | 1.05E-03 |
| 28 | GO:0009855: determination of bilateral symmetry | 1.05E-03 |
| 29 | GO:0009658: chloroplast organization | 1.18E-03 |
| 30 | GO:0048443: stamen development | 1.28E-03 |
| 31 | GO:0006808: regulation of nitrogen utilization | 1.40E-03 |
| 32 | GO:0071249: cellular response to nitrate | 1.40E-03 |
| 33 | GO:0080022: primary root development | 1.49E-03 |
| 34 | GO:0010087: phloem or xylem histogenesis | 1.49E-03 |
| 35 | GO:0016131: brassinosteroid metabolic process | 1.78E-03 |
| 36 | GO:0016558: protein import into peroxisome matrix | 1.78E-03 |
| 37 | GO:0042793: transcription from plastid promoter | 2.19E-03 |
| 38 | GO:0003006: developmental process involved in reproduction | 2.19E-03 |
| 39 | GO:0010014: meristem initiation | 2.63E-03 |
| 40 | GO:0010019: chloroplast-nucleus signaling pathway | 2.63E-03 |
| 41 | GO:0048444: floral organ morphogenesis | 2.63E-03 |
| 42 | GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity | 2.63E-03 |
| 43 | GO:0080060: integument development | 2.63E-03 |
| 44 | GO:2000033: regulation of seed dormancy process | 2.63E-03 |
| 45 | GO:0006281: DNA repair | 2.97E-03 |
| 46 | GO:0006401: RNA catabolic process | 3.09E-03 |
| 47 | GO:0010374: stomatal complex development | 3.09E-03 |
| 48 | GO:1900056: negative regulation of leaf senescence | 3.09E-03 |
| 49 | GO:0040008: regulation of growth | 3.37E-03 |
| 50 | GO:0009938: negative regulation of gibberellic acid mediated signaling pathway | 3.59E-03 |
| 51 | GO:0010492: maintenance of shoot apical meristem identity | 3.59E-03 |
| 52 | GO:0010928: regulation of auxin mediated signaling pathway | 3.59E-03 |
| 53 | GO:0005978: glycogen biosynthetic process | 3.59E-03 |
| 54 | GO:0009787: regulation of abscisic acid-activated signaling pathway | 3.59E-03 |
| 55 | GO:0006353: DNA-templated transcription, termination | 3.59E-03 |
| 56 | GO:0009451: RNA modification | 3.68E-03 |
| 57 | GO:0010052: guard cell differentiation | 4.10E-03 |
| 58 | GO:0010100: negative regulation of photomorphogenesis | 4.10E-03 |
| 59 | GO:0007389: pattern specification process | 4.10E-03 |
| 60 | GO:0009827: plant-type cell wall modification | 4.10E-03 |
| 61 | GO:0010233: phloem transport | 4.10E-03 |
| 62 | GO:0048589: developmental growth | 4.65E-03 |
| 63 | GO:0006607: NLS-bearing protein import into nucleus | 4.65E-03 |
| 64 | GO:0048507: meristem development | 4.65E-03 |
| 65 | GO:0009867: jasmonic acid mediated signaling pathway | 4.69E-03 |
| 66 | GO:0048829: root cap development | 5.80E-03 |
| 67 | GO:0006298: mismatch repair | 5.80E-03 |
| 68 | GO:0016441: posttranscriptional gene silencing | 5.80E-03 |
| 69 | GO:0006949: syncytium formation | 5.80E-03 |
| 70 | GO:0006259: DNA metabolic process | 5.80E-03 |
| 71 | GO:0006265: DNA topological change | 6.41E-03 |
| 72 | GO:0048765: root hair cell differentiation | 6.41E-03 |
| 73 | GO:0009682: induced systemic resistance | 6.41E-03 |
| 74 | GO:0009965: leaf morphogenesis | 6.78E-03 |
| 75 | GO:0010582: floral meristem determinacy | 7.04E-03 |
| 76 | GO:0006260: DNA replication | 7.31E-03 |
| 77 | GO:0010075: regulation of meristem growth | 7.70E-03 |
| 78 | GO:0010588: cotyledon vascular tissue pattern formation | 7.70E-03 |
| 79 | GO:0006364: rRNA processing | 8.14E-03 |
| 80 | GO:0009934: regulation of meristem structural organization | 8.37E-03 |
| 81 | GO:0006302: double-strand break repair | 8.37E-03 |
| 82 | GO:0048467: gynoecium development | 8.37E-03 |
| 83 | GO:0006541: glutamine metabolic process | 8.37E-03 |
| 84 | GO:0010020: chloroplast fission | 8.37E-03 |
| 85 | GO:0006270: DNA replication initiation | 8.37E-03 |
| 86 | GO:0009793: embryo development ending in seed dormancy | 8.62E-03 |
| 87 | GO:0006636: unsaturated fatty acid biosynthetic process | 9.79E-03 |
| 88 | GO:0048367: shoot system development | 9.95E-03 |
| 89 | GO:2000377: regulation of reactive oxygen species metabolic process | 1.05E-02 |
| 90 | GO:0000027: ribosomal large subunit assembly | 1.05E-02 |
| 91 | GO:0009863: salicylic acid mediated signaling pathway | 1.05E-02 |
| 92 | GO:0010187: negative regulation of seed germination | 1.05E-02 |
| 93 | GO:0010073: meristem maintenance | 1.13E-02 |
| 94 | GO:0051302: regulation of cell division | 1.13E-02 |
| 95 | GO:0006418: tRNA aminoacylation for protein translation | 1.13E-02 |
| 96 | GO:0003333: amino acid transmembrane transport | 1.21E-02 |
| 97 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 1.29E-02 |
| 98 | GO:0030245: cellulose catabolic process | 1.29E-02 |
| 99 | GO:0006355: regulation of transcription, DNA-templated | 1.31E-02 |
| 100 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 1.37E-02 |
| 101 | GO:0042127: regulation of cell proliferation | 1.45E-02 |
| 102 | GO:0006284: base-excision repair | 1.45E-02 |
| 103 | GO:0051028: mRNA transport | 1.54E-02 |
| 104 | GO:0009058: biosynthetic process | 1.54E-02 |
| 105 | GO:0008033: tRNA processing | 1.62E-02 |
| 106 | GO:0010501: RNA secondary structure unwinding | 1.62E-02 |
| 107 | GO:0010118: stomatal movement | 1.62E-02 |
| 108 | GO:0042335: cuticle development | 1.62E-02 |
| 109 | GO:0008360: regulation of cell shape | 1.71E-02 |
| 110 | GO:0009958: positive gravitropism | 1.71E-02 |
| 111 | GO:0009741: response to brassinosteroid | 1.71E-02 |
| 112 | GO:0010268: brassinosteroid homeostasis | 1.71E-02 |
| 113 | GO:0010305: leaf vascular tissue pattern formation | 1.71E-02 |
| 114 | GO:0007059: chromosome segregation | 1.80E-02 |
| 115 | GO:0009749: response to glucose | 1.89E-02 |
| 116 | GO:0019252: starch biosynthetic process | 1.89E-02 |
| 117 | GO:0009791: post-embryonic development | 1.89E-02 |
| 118 | GO:0006635: fatty acid beta-oxidation | 1.99E-02 |
| 119 | GO:0080156: mitochondrial mRNA modification | 1.99E-02 |
| 120 | GO:0002229: defense response to oomycetes | 1.99E-02 |
| 121 | GO:0032502: developmental process | 2.08E-02 |
| 122 | GO:0007264: small GTPase mediated signal transduction | 2.08E-02 |
| 123 | GO:0006464: cellular protein modification process | 2.28E-02 |
| 124 | GO:0009828: plant-type cell wall loosening | 2.28E-02 |
| 125 | GO:0019760: glucosinolate metabolic process | 2.28E-02 |
| 126 | GO:0008380: RNA splicing | 2.40E-02 |
| 127 | GO:0010029: regulation of seed germination | 2.69E-02 |
| 128 | GO:0009627: systemic acquired resistance | 2.80E-02 |
| 129 | GO:0016311: dephosphorylation | 3.01E-02 |
| 130 | GO:0048481: plant ovule development | 3.12E-02 |
| 131 | GO:0045893: positive regulation of transcription, DNA-templated | 3.29E-02 |
| 132 | GO:0010218: response to far red light | 3.35E-02 |
| 133 | GO:0048527: lateral root development | 3.46E-02 |
| 134 | GO:0006865: amino acid transport | 3.58E-02 |
| 135 | GO:0006351: transcription, DNA-templated | 3.65E-02 |
| 136 | GO:0030001: metal ion transport | 4.05E-02 |
| 137 | GO:0008283: cell proliferation | 4.42E-02 |
| 138 | GO:0051707: response to other organism | 4.42E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004479: methionyl-tRNA formyltransferase activity | 0.00E+00 |
| 2 | GO:0004808: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity | 0.00E+00 |
| 3 | GO:0004835: tubulin-tyrosine ligase activity | 0.00E+00 |
| 4 | GO:0004015: adenosylmethionine-8-amino-7-oxononanoate transaminase activity | 0.00E+00 |
| 5 | GO:0003922: GMP synthase (glutamine-hydrolyzing) activity | 0.00E+00 |
| 6 | GO:0043399: tRNA A64-2'-O-ribosylphosphate transferase activity | 0.00E+00 |
| 7 | GO:0016763: transferase activity, transferring pentosyl groups | 0.00E+00 |
| 8 | GO:0008859: exoribonuclease II activity | 0.00E+00 |
| 9 | GO:0004141: dethiobiotin synthase activity | 0.00E+00 |
| 10 | GO:0000979: RNA polymerase II core promoter sequence-specific DNA binding | 0.00E+00 |
| 11 | GO:0010011: auxin binding | 3.00E-05 |
| 12 | GO:0003723: RNA binding | 1.11E-04 |
| 13 | GO:0008395: steroid hydroxylase activity | 2.02E-04 |
| 14 | GO:0034335: DNA supercoiling activity | 2.02E-04 |
| 15 | GO:0016901: oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor | 2.02E-04 |
| 16 | GO:0004824: lysine-tRNA ligase activity | 2.02E-04 |
| 17 | GO:0003844: 1,4-alpha-glucan branching enzyme activity | 4.52E-04 |
| 18 | GO:0032454: histone demethylase activity (H3-K9 specific) | 4.52E-04 |
| 19 | GO:0042389: omega-3 fatty acid desaturase activity | 4.52E-04 |
| 20 | GO:0004809: tRNA (guanine-N2-)-methyltransferase activity | 4.52E-04 |
| 21 | GO:0016742: hydroxymethyl-, formyl- and related transferase activity | 7.36E-04 |
| 22 | GO:0008864: formyltetrahydrofolate deformylase activity | 7.36E-04 |
| 23 | GO:0043169: cation binding | 7.36E-04 |
| 24 | GO:0008097: 5S rRNA binding | 1.05E-03 |
| 25 | GO:0003916: DNA topoisomerase activity | 1.05E-03 |
| 26 | GO:0003727: single-stranded RNA binding | 1.28E-03 |
| 27 | GO:0008409: 5'-3' exonuclease activity | 1.40E-03 |
| 28 | GO:0010328: auxin influx transmembrane transporter activity | 1.40E-03 |
| 29 | GO:0008725: DNA-3-methyladenine glycosylase activity | 1.78E-03 |
| 30 | GO:0004556: alpha-amylase activity | 2.19E-03 |
| 31 | GO:0016462: pyrophosphatase activity | 2.19E-03 |
| 32 | GO:0003688: DNA replication origin binding | 2.19E-03 |
| 33 | GO:0004519: endonuclease activity | 3.37E-03 |
| 34 | GO:0017056: structural constituent of nuclear pore | 3.59E-03 |
| 35 | GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity | 4.10E-03 |
| 36 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 4.10E-03 |
| 37 | GO:0000989: transcription factor activity, transcription factor binding | 4.65E-03 |
| 38 | GO:0003700: transcription factor activity, sequence-specific DNA binding | 4.88E-03 |
| 39 | GO:0003993: acid phosphatase activity | 4.90E-03 |
| 40 | GO:0005487: nucleocytoplasmic transporter activity | 5.21E-03 |
| 41 | GO:0031490: chromatin DNA binding | 5.21E-03 |
| 42 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 6.41E-03 |
| 43 | GO:0000976: transcription regulatory region sequence-specific DNA binding | 7.04E-03 |
| 44 | GO:0003725: double-stranded RNA binding | 7.70E-03 |
| 45 | GO:0009982: pseudouridine synthase activity | 7.70E-03 |
| 46 | GO:0000175: 3'-5'-exoribonuclease activity | 7.70E-03 |
| 47 | GO:0008266: poly(U) RNA binding | 8.37E-03 |
| 48 | GO:0003887: DNA-directed DNA polymerase activity | 9.79E-03 |
| 49 | GO:0016874: ligase activity | 1.09E-02 |
| 50 | GO:0003779: actin binding | 1.13E-02 |
| 51 | GO:0004722: protein serine/threonine phosphatase activity | 1.16E-02 |
| 52 | GO:0008408: 3'-5' exonuclease activity | 1.21E-02 |
| 53 | GO:0004540: ribonuclease activity | 1.21E-02 |
| 54 | GO:0008026: ATP-dependent helicase activity | 1.23E-02 |
| 55 | GO:0008810: cellulase activity | 1.37E-02 |
| 56 | GO:0019843: rRNA binding | 1.46E-02 |
| 57 | GO:0004812: aminoacyl-tRNA ligase activity | 1.54E-02 |
| 58 | GO:0003677: DNA binding | 1.64E-02 |
| 59 | GO:0019901: protein kinase binding | 1.89E-02 |
| 60 | GO:0048038: quinone binding | 1.99E-02 |
| 61 | GO:0008289: lipid binding | 2.04E-02 |
| 62 | GO:0003684: damaged DNA binding | 2.28E-02 |
| 63 | GO:0016791: phosphatase activity | 2.28E-02 |
| 64 | GO:0016887: ATPase activity | 2.34E-02 |
| 65 | GO:0004004: ATP-dependent RNA helicase activity | 2.90E-02 |
| 66 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 3.35E-02 |
| 67 | GO:0003697: single-stranded DNA binding | 3.69E-02 |
| 68 | GO:0043565: sequence-specific DNA binding | 3.86E-02 |
| 69 | GO:0004712: protein serine/threonine/tyrosine kinase activity | 3.93E-02 |
| 70 | GO:0005524: ATP binding | 4.00E-02 |
| 71 | GO:0043621: protein self-association | 4.68E-02 |
| 72 | GO:0015293: symporter activity | 4.80E-02 |
| 73 | GO:0042803: protein homodimerization activity | 4.82E-02 |