GO Enrichment Analysis of Co-expressed Genes with
AT3G24190
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046471: phosphatidylglycerol metabolic process | 0.00E+00 |
| 2 | GO:0052865: 1-deoxy-D-xylulose 5-phosphate biosynthetic process | 0.00E+00 |
| 3 | GO:1902171: regulation of tocopherol cyclase activity | 0.00E+00 |
| 4 | GO:1901918: negative regulation of exoribonuclease activity | 0.00E+00 |
| 5 | GO:0015995: chlorophyll biosynthetic process | 1.42E-05 |
| 6 | GO:0006546: glycine catabolic process | 2.06E-05 |
| 7 | GO:0019464: glycine decarboxylation via glycine cleavage system | 2.06E-05 |
| 8 | GO:0010362: negative regulation of anion channel activity by blue light | 1.62E-04 |
| 9 | GO:0015969: guanosine tetraphosphate metabolic process | 1.62E-04 |
| 10 | GO:1902025: nitrate import | 1.62E-04 |
| 11 | GO:0046467: membrane lipid biosynthetic process | 1.62E-04 |
| 12 | GO:0043087: regulation of GTPase activity | 1.62E-04 |
| 13 | GO:0071461: cellular response to redox state | 1.62E-04 |
| 14 | GO:0046167: glycerol-3-phosphate biosynthetic process | 1.62E-04 |
| 15 | GO:0090548: response to nitrate starvation | 1.62E-04 |
| 16 | GO:0006098: pentose-phosphate shunt | 1.84E-04 |
| 17 | GO:0055114: oxidation-reduction process | 3.34E-04 |
| 18 | GO:0006650: glycerophospholipid metabolic process | 3.69E-04 |
| 19 | GO:0080005: photosystem stoichiometry adjustment | 3.69E-04 |
| 20 | GO:0010541: acropetal auxin transport | 3.69E-04 |
| 21 | GO:0010155: regulation of proton transport | 3.69E-04 |
| 22 | GO:0006094: gluconeogenesis | 3.96E-04 |
| 23 | GO:0010207: photosystem II assembly | 4.47E-04 |
| 24 | GO:0046168: glycerol-3-phosphate catabolic process | 6.04E-04 |
| 25 | GO:0010160: formation of animal organ boundary | 6.04E-04 |
| 26 | GO:0044375: regulation of peroxisome size | 6.04E-04 |
| 27 | GO:0046621: negative regulation of organ growth | 6.04E-04 |
| 28 | GO:0009658: chloroplast organization | 7.49E-04 |
| 29 | GO:0006857: oligopeptide transport | 8.57E-04 |
| 30 | GO:0043481: anthocyanin accumulation in tissues in response to UV light | 8.63E-04 |
| 31 | GO:0006072: glycerol-3-phosphate metabolic process | 8.63E-04 |
| 32 | GO:1990019: protein storage vacuole organization | 8.63E-04 |
| 33 | GO:0042823: pyridoxal phosphate biosynthetic process | 8.63E-04 |
| 34 | GO:2001141: regulation of RNA biosynthetic process | 8.63E-04 |
| 35 | GO:0019722: calcium-mediated signaling | 9.56E-04 |
| 36 | GO:0010021: amylopectin biosynthetic process | 1.14E-03 |
| 37 | GO:0015689: molybdate ion transport | 1.14E-03 |
| 38 | GO:0019252: starch biosynthetic process | 1.37E-03 |
| 39 | GO:0009904: chloroplast accumulation movement | 1.45E-03 |
| 40 | GO:0006465: signal peptide processing | 1.45E-03 |
| 41 | GO:0032502: developmental process | 1.56E-03 |
| 42 | GO:0009920: cell plate formation involved in plant-type cell wall biogenesis | 1.78E-03 |
| 43 | GO:0009228: thiamine biosynthetic process | 1.78E-03 |
| 44 | GO:0060918: auxin transport | 1.78E-03 |
| 45 | GO:0042549: photosystem II stabilization | 1.78E-03 |
| 46 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 1.78E-03 |
| 47 | GO:0007267: cell-cell signaling | 1.88E-03 |
| 48 | GO:0009903: chloroplast avoidance movement | 2.14E-03 |
| 49 | GO:0009554: megasporogenesis | 2.14E-03 |
| 50 | GO:0048437: floral organ development | 2.52E-03 |
| 51 | GO:0050829: defense response to Gram-negative bacterium | 2.52E-03 |
| 52 | GO:0006400: tRNA modification | 2.52E-03 |
| 53 | GO:1900056: negative regulation of leaf senescence | 2.52E-03 |
| 54 | GO:0042255: ribosome assembly | 2.91E-03 |
| 55 | GO:0006353: DNA-templated transcription, termination | 2.91E-03 |
| 56 | GO:0009690: cytokinin metabolic process | 2.91E-03 |
| 57 | GO:0050821: protein stabilization | 2.91E-03 |
| 58 | GO:0016559: peroxisome fission | 2.91E-03 |
| 59 | GO:0007155: cell adhesion | 2.91E-03 |
| 60 | GO:0006811: ion transport | 3.01E-03 |
| 61 | GO:0009657: plastid organization | 3.33E-03 |
| 62 | GO:0009932: cell tip growth | 3.33E-03 |
| 63 | GO:0071482: cellular response to light stimulus | 3.33E-03 |
| 64 | GO:0009637: response to blue light | 3.46E-03 |
| 65 | GO:0009821: alkaloid biosynthetic process | 3.77E-03 |
| 66 | GO:0051865: protein autoubiquitination | 3.77E-03 |
| 67 | GO:0090305: nucleic acid phosphodiester bond hydrolysis | 3.77E-03 |
| 68 | GO:0010380: regulation of chlorophyll biosynthetic process | 4.22E-03 |
| 69 | GO:0009638: phototropism | 4.22E-03 |
| 70 | GO:0010215: cellulose microfibril organization | 4.69E-03 |
| 71 | GO:0006352: DNA-templated transcription, initiation | 5.19E-03 |
| 72 | GO:0016485: protein processing | 5.19E-03 |
| 73 | GO:0016024: CDP-diacylglycerol biosynthetic process | 5.69E-03 |
| 74 | GO:0008361: regulation of cell size | 5.69E-03 |
| 75 | GO:0044550: secondary metabolite biosynthetic process | 6.15E-03 |
| 76 | GO:0009785: blue light signaling pathway | 6.22E-03 |
| 77 | GO:0009718: anthocyanin-containing compound biosynthetic process | 6.22E-03 |
| 78 | GO:0009725: response to hormone | 6.22E-03 |
| 79 | GO:0009767: photosynthetic electron transport chain | 6.22E-03 |
| 80 | GO:0010143: cutin biosynthetic process | 6.76E-03 |
| 81 | GO:0009887: animal organ morphogenesis | 6.76E-03 |
| 82 | GO:0010540: basipetal auxin transport | 6.76E-03 |
| 83 | GO:0006096: glycolytic process | 7.08E-03 |
| 84 | GO:0042343: indole glucosinolate metabolic process | 7.32E-03 |
| 85 | GO:0009825: multidimensional cell growth | 7.32E-03 |
| 86 | GO:0007031: peroxisome organization | 7.32E-03 |
| 87 | GO:0006636: unsaturated fatty acid biosynthetic process | 7.90E-03 |
| 88 | GO:0009833: plant-type primary cell wall biogenesis | 7.90E-03 |
| 89 | GO:0006833: water transport | 7.90E-03 |
| 90 | GO:0016114: terpenoid biosynthetic process | 9.72E-03 |
| 91 | GO:0098542: defense response to other organism | 9.72E-03 |
| 92 | GO:0030433: ubiquitin-dependent ERAD pathway | 1.04E-02 |
| 93 | GO:0019748: secondary metabolic process | 1.04E-02 |
| 94 | GO:0009294: DNA mediated transformation | 1.10E-02 |
| 95 | GO:0048443: stamen development | 1.17E-02 |
| 96 | GO:0006817: phosphate ion transport | 1.17E-02 |
| 97 | GO:0071555: cell wall organization | 1.29E-02 |
| 98 | GO:0034220: ion transmembrane transport | 1.31E-02 |
| 99 | GO:0009958: positive gravitropism | 1.38E-02 |
| 100 | GO:0006520: cellular amino acid metabolic process | 1.38E-02 |
| 101 | GO:0008654: phospholipid biosynthetic process | 1.52E-02 |
| 102 | GO:0007264: small GTPase mediated signal transduction | 1.67E-02 |
| 103 | GO:0009639: response to red or far red light | 1.83E-02 |
| 104 | GO:0009788: negative regulation of abscisic acid-activated signaling pathway | 2.16E-02 |
| 105 | GO:0042128: nitrate assimilation | 2.24E-02 |
| 106 | GO:0010411: xyloglucan metabolic process | 2.33E-02 |
| 107 | GO:0030244: cellulose biosynthetic process | 2.51E-02 |
| 108 | GO:0046686: response to cadmium ion | 2.51E-02 |
| 109 | GO:0018298: protein-chromophore linkage | 2.51E-02 |
| 110 | GO:0055085: transmembrane transport | 2.54E-02 |
| 111 | GO:0000160: phosphorelay signal transduction system | 2.60E-02 |
| 112 | GO:0010218: response to far red light | 2.69E-02 |
| 113 | GO:0048527: lateral root development | 2.78E-02 |
| 114 | GO:0010119: regulation of stomatal movement | 2.78E-02 |
| 115 | GO:0007568: aging | 2.78E-02 |
| 116 | GO:0009910: negative regulation of flower development | 2.78E-02 |
| 117 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 2.94E-02 |
| 118 | GO:0034599: cellular response to oxidative stress | 3.06E-02 |
| 119 | GO:0006631: fatty acid metabolic process | 3.35E-02 |
| 120 | GO:0009640: photomorphogenesis | 3.55E-02 |
| 121 | GO:0010114: response to red light | 3.55E-02 |
| 122 | GO:0009926: auxin polar transport | 3.55E-02 |
| 123 | GO:0009744: response to sucrose | 3.55E-02 |
| 124 | GO:0000209: protein polyubiquitination | 3.66E-02 |
| 125 | GO:0042546: cell wall biogenesis | 3.66E-02 |
| 126 | GO:0032259: methylation | 4.01E-02 |
| 127 | GO:0042538: hyperosmotic salinity response | 4.18E-02 |
| 128 | GO:0006397: mRNA processing | 4.36E-02 |
| 129 | GO:0009585: red, far-red light phototransduction | 4.39E-02 |
| 130 | GO:0006417: regulation of translation | 4.72E-02 |
| 131 | GO:0043086: negative regulation of catalytic activity | 4.94E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009673: low-affinity phosphate transmembrane transporter activity | 0.00E+00 |
| 2 | GO:0033840: NDP-glucose-starch glucosyltransferase activity | 0.00E+00 |
| 3 | GO:0036361: racemase activity, acting on amino acids and derivatives | 0.00E+00 |
| 4 | GO:0016855: racemase and epimerase activity, acting on amino acids and derivatives | 0.00E+00 |
| 5 | GO:0008942: nitrite reductase [NAD(P)H] activity | 0.00E+00 |
| 6 | GO:0052637: delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase activity | 0.00E+00 |
| 7 | GO:0046406: magnesium protoporphyrin IX methyltransferase activity | 0.00E+00 |
| 8 | GO:0004373: glycogen (starch) synthase activity | 4.78E-06 |
| 9 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 1.11E-05 |
| 10 | GO:0009011: starch synthase activity | 2.06E-05 |
| 11 | GO:0000293: ferric-chelate reductase activity | 4.99E-05 |
| 12 | GO:0004332: fructose-bisphosphate aldolase activity | 4.99E-05 |
| 13 | GO:0004328: formamidase activity | 1.62E-04 |
| 14 | GO:0047259: glucomannan 4-beta-mannosyltransferase activity | 1.62E-04 |
| 15 | GO:0018708: thiol S-methyltransferase activity | 3.69E-04 |
| 16 | GO:0008728: GTP diphosphokinase activity | 3.69E-04 |
| 17 | GO:0008661: 1-deoxy-D-xylulose-5-phosphate synthase activity | 3.69E-04 |
| 18 | GO:0033201: alpha-1,4-glucan synthase activity | 3.69E-04 |
| 19 | GO:0004565: beta-galactosidase activity | 3.96E-04 |
| 20 | GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity | 6.04E-04 |
| 21 | GO:0010277: chlorophyllide a oxygenase [overall] activity | 6.04E-04 |
| 22 | GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | 8.63E-04 |
| 23 | GO:0009882: blue light photoreceptor activity | 8.63E-04 |
| 24 | GO:0003727: single-stranded RNA binding | 9.56E-04 |
| 25 | GO:0016987: sigma factor activity | 1.14E-03 |
| 26 | GO:0015098: molybdate ion transmembrane transporter activity | 1.14E-03 |
| 27 | GO:0042277: peptide binding | 1.14E-03 |
| 28 | GO:0001053: plastid sigma factor activity | 1.14E-03 |
| 29 | GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | 1.45E-03 |
| 30 | GO:0016491: oxidoreductase activity | 1.54E-03 |
| 31 | GO:0035673: oligopeptide transmembrane transporter activity | 1.78E-03 |
| 32 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 1.78E-03 |
| 33 | GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity | 1.78E-03 |
| 34 | GO:0004672: protein kinase activity | 1.92E-03 |
| 35 | GO:0051753: mannan synthase activity | 2.14E-03 |
| 36 | GO:0003730: mRNA 3'-UTR binding | 2.14E-03 |
| 37 | GO:0042802: identical protein binding | 3.28E-03 |
| 38 | GO:0016757: transferase activity, transferring glycosyl groups | 3.31E-03 |
| 39 | GO:0016844: strictosidine synthase activity | 4.22E-03 |
| 40 | GO:0035091: phosphatidylinositol binding | 4.81E-03 |
| 41 | GO:0051537: 2 iron, 2 sulfur cluster binding | 4.81E-03 |
| 42 | GO:0015198: oligopeptide transporter activity | 5.69E-03 |
| 43 | GO:0003690: double-stranded DNA binding | 6.20E-03 |
| 44 | GO:0010329: auxin efflux transmembrane transporter activity | 6.22E-03 |
| 45 | GO:0008081: phosphoric diester hydrolase activity | 6.22E-03 |
| 46 | GO:0005315: inorganic phosphate transmembrane transporter activity | 6.22E-03 |
| 47 | GO:0000155: phosphorelay sensor kinase activity | 6.22E-03 |
| 48 | GO:0052689: carboxylic ester hydrolase activity | 6.28E-03 |
| 49 | GO:0031624: ubiquitin conjugating enzyme binding | 6.76E-03 |
| 50 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 7.31E-03 |
| 51 | GO:0004871: signal transducer activity | 7.38E-03 |
| 52 | GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | 7.67E-03 |
| 53 | GO:0016760: cellulose synthase (UDP-forming) activity | 1.10E-02 |
| 54 | GO:0005506: iron ion binding | 1.26E-02 |
| 55 | GO:0046910: pectinesterase inhibitor activity | 1.38E-02 |
| 56 | GO:0010181: FMN binding | 1.45E-02 |
| 57 | GO:0004872: receptor activity | 1.52E-02 |
| 58 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 1.60E-02 |
| 59 | GO:0004518: nuclease activity | 1.67E-02 |
| 60 | GO:0016791: phosphatase activity | 1.83E-02 |
| 61 | GO:0016759: cellulose synthase activity | 1.83E-02 |
| 62 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 1.88E-02 |
| 63 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 1.91E-02 |
| 64 | GO:0015250: water channel activity | 2.07E-02 |
| 65 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 2.33E-02 |
| 66 | GO:0003729: mRNA binding | 2.34E-02 |
| 67 | GO:0005096: GTPase activator activity | 2.60E-02 |
| 68 | GO:0019825: oxygen binding | 2.93E-02 |
| 69 | GO:0061630: ubiquitin protein ligase activity | 2.99E-02 |
| 70 | GO:0004185: serine-type carboxypeptidase activity | 3.55E-02 |
| 71 | GO:0043621: protein self-association | 3.76E-02 |
| 72 | GO:0015293: symporter activity | 3.86E-02 |
| 73 | GO:0051287: NAD binding | 4.07E-02 |
| 74 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 4.39E-02 |
| 75 | GO:0031625: ubiquitin protein ligase binding | 4.72E-02 |
| 76 | GO:0045330: aspartyl esterase activity | 4.72E-02 |