GO Enrichment Analysis of Co-expressed Genes with
AT3G24180
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0001881: receptor recycling | 0.00E+00 |
| 2 | GO:0072722: response to amitrole | 0.00E+00 |
| 3 | GO:0010055: atrichoblast differentiation | 0.00E+00 |
| 4 | GO:0006903: vesicle targeting | 0.00E+00 |
| 5 | GO:0043620: regulation of DNA-templated transcription in response to stress | 0.00E+00 |
| 6 | GO:2001253: regulation of histone H3-K36 trimethylation | 0.00E+00 |
| 7 | GO:0010793: regulation of mRNA export from nucleus | 0.00E+00 |
| 8 | GO:0010499: proteasomal ubiquitin-independent protein catabolic process | 0.00E+00 |
| 9 | GO:0010227: floral organ abscission | 9.34E-05 |
| 10 | GO:0006623: protein targeting to vacuole | 1.83E-04 |
| 11 | GO:0006511: ubiquitin-dependent protein catabolic process | 2.08E-04 |
| 12 | GO:0032107: regulation of response to nutrient levels | 2.13E-04 |
| 13 | GO:0035266: meristem growth | 2.13E-04 |
| 14 | GO:0007292: female gamete generation | 2.13E-04 |
| 15 | GO:0009623: response to parasitic fungus | 2.13E-04 |
| 16 | GO:0099132: ATP hydrolysis coupled cation transmembrane transport | 2.13E-04 |
| 17 | GO:0042964: thioredoxin reduction | 2.13E-04 |
| 18 | GO:0008202: steroid metabolic process | 3.26E-04 |
| 19 | GO:0006888: ER to Golgi vesicle-mediated transport | 4.13E-04 |
| 20 | GO:0046686: response to cadmium ion | 4.14E-04 |
| 21 | GO:0046939: nucleotide phosphorylation | 4.76E-04 |
| 22 | GO:0050684: regulation of mRNA processing | 4.76E-04 |
| 23 | GO:0051788: response to misfolded protein | 4.76E-04 |
| 24 | GO:0019725: cellular homeostasis | 4.76E-04 |
| 25 | GO:0048209: regulation of vesicle targeting, to, from or within Golgi | 4.76E-04 |
| 26 | GO:0051252: regulation of RNA metabolic process | 4.76E-04 |
| 27 | GO:0043132: NAD transport | 4.76E-04 |
| 28 | GO:0009225: nucleotide-sugar metabolic process | 7.24E-04 |
| 29 | GO:0044375: regulation of peroxisome size | 7.74E-04 |
| 30 | GO:0090630: activation of GTPase activity | 7.74E-04 |
| 31 | GO:0045836: positive regulation of meiotic nuclear division | 7.74E-04 |
| 32 | GO:0010186: positive regulation of cellular defense response | 7.74E-04 |
| 33 | GO:0010272: response to silver ion | 7.74E-04 |
| 34 | GO:0060968: regulation of gene silencing | 7.74E-04 |
| 35 | GO:0008333: endosome to lysosome transport | 7.74E-04 |
| 36 | GO:0032784: regulation of DNA-templated transcription, elongation | 7.74E-04 |
| 37 | GO:0061158: 3'-UTR-mediated mRNA destabilization | 7.74E-04 |
| 38 | GO:0010253: UDP-rhamnose biosynthetic process | 7.74E-04 |
| 39 | GO:0051176: positive regulation of sulfur metabolic process | 7.74E-04 |
| 40 | GO:0006874: cellular calcium ion homeostasis | 9.78E-04 |
| 41 | GO:0016998: cell wall macromolecule catabolic process | 1.07E-03 |
| 42 | GO:0000187: activation of MAPK activity | 1.10E-03 |
| 43 | GO:0006612: protein targeting to membrane | 1.10E-03 |
| 44 | GO:0006893: Golgi to plasma membrane transport | 1.10E-03 |
| 45 | GO:0048577: negative regulation of short-day photoperiodism, flowering | 1.10E-03 |
| 46 | GO:0015858: nucleoside transport | 1.10E-03 |
| 47 | GO:0009814: defense response, incompatible interaction | 1.17E-03 |
| 48 | GO:0030433: ubiquitin-dependent ERAD pathway | 1.17E-03 |
| 49 | GO:0060548: negative regulation of cell death | 1.47E-03 |
| 50 | GO:0033320: UDP-D-xylose biosynthetic process | 1.47E-03 |
| 51 | GO:0006536: glutamate metabolic process | 1.47E-03 |
| 52 | GO:0006878: cellular copper ion homeostasis | 1.47E-03 |
| 53 | GO:0042147: retrograde transport, endosome to Golgi | 1.49E-03 |
| 54 | GO:0048544: recognition of pollen | 1.86E-03 |
| 55 | GO:0045927: positive regulation of growth | 1.87E-03 |
| 56 | GO:0010183: pollen tube guidance | 1.99E-03 |
| 57 | GO:0006891: intra-Golgi vesicle-mediated transport | 2.13E-03 |
| 58 | GO:0048827: phyllome development | 2.31E-03 |
| 59 | GO:0010264: myo-inositol hexakisphosphate biosynthetic process | 2.31E-03 |
| 60 | GO:0048232: male gamete generation | 2.31E-03 |
| 61 | GO:0043248: proteasome assembly | 2.31E-03 |
| 62 | GO:0042732: D-xylose metabolic process | 2.31E-03 |
| 63 | GO:0042176: regulation of protein catabolic process | 2.31E-03 |
| 64 | GO:0060918: auxin transport | 2.31E-03 |
| 65 | GO:0010315: auxin efflux | 2.31E-03 |
| 66 | GO:0003006: developmental process involved in reproduction | 2.31E-03 |
| 67 | GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly | 2.31E-03 |
| 68 | GO:0045454: cell redox homeostasis | 2.43E-03 |
| 69 | GO:0009567: double fertilization forming a zygote and endosperm | 2.58E-03 |
| 70 | GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response | 2.77E-03 |
| 71 | GO:0048280: vesicle fusion with Golgi apparatus | 2.77E-03 |
| 72 | GO:0006468: protein phosphorylation | 3.02E-03 |
| 73 | GO:0009615: response to virus | 3.07E-03 |
| 74 | GO:0080027: response to herbivore | 3.26E-03 |
| 75 | GO:1900056: negative regulation of leaf senescence | 3.26E-03 |
| 76 | GO:0015937: coenzyme A biosynthetic process | 3.26E-03 |
| 77 | GO:0000122: negative regulation of transcription from RNA polymerase II promoter | 3.26E-03 |
| 78 | GO:0009627: systemic acquired resistance | 3.43E-03 |
| 79 | GO:0006102: isocitrate metabolic process | 3.78E-03 |
| 80 | GO:0009819: drought recovery | 3.78E-03 |
| 81 | GO:0010078: maintenance of root meristem identity | 3.78E-03 |
| 82 | GO:0060321: acceptance of pollen | 4.33E-03 |
| 83 | GO:0019430: removal of superoxide radicals | 4.33E-03 |
| 84 | GO:0009657: plastid organization | 4.33E-03 |
| 85 | GO:0006499: N-terminal protein myristoylation | 4.41E-03 |
| 86 | GO:0007338: single fertilization | 4.90E-03 |
| 87 | GO:0006099: tricarboxylic acid cycle | 5.30E-03 |
| 88 | GO:0090332: stomatal closure | 5.50E-03 |
| 89 | GO:0048354: mucilage biosynthetic process involved in seed coat development | 5.50E-03 |
| 90 | GO:0048829: root cap development | 6.12E-03 |
| 91 | GO:0016441: posttranscriptional gene silencing | 6.12E-03 |
| 92 | GO:0051555: flavonol biosynthetic process | 6.12E-03 |
| 93 | GO:0006896: Golgi to vacuole transport | 6.12E-03 |
| 94 | GO:0006032: chitin catabolic process | 6.12E-03 |
| 95 | GO:0030148: sphingolipid biosynthetic process | 6.77E-03 |
| 96 | GO:0010015: root morphogenesis | 6.77E-03 |
| 97 | GO:0072593: reactive oxygen species metabolic process | 6.77E-03 |
| 98 | GO:0000272: polysaccharide catabolic process | 6.77E-03 |
| 99 | GO:0008361: regulation of cell size | 7.44E-03 |
| 100 | GO:0010105: negative regulation of ethylene-activated signaling pathway | 7.44E-03 |
| 101 | GO:0000165: MAPK cascade | 7.91E-03 |
| 102 | GO:0009555: pollen development | 7.99E-03 |
| 103 | GO:0055046: microgametogenesis | 8.13E-03 |
| 104 | GO:0010102: lateral root morphogenesis | 8.13E-03 |
| 105 | GO:0009846: pollen germination | 8.20E-03 |
| 106 | GO:0007165: signal transduction | 8.20E-03 |
| 107 | GO:0009266: response to temperature stimulus | 8.84E-03 |
| 108 | GO:0007034: vacuolar transport | 8.84E-03 |
| 109 | GO:0009933: meristem structural organization | 8.84E-03 |
| 110 | GO:0070588: calcium ion transmembrane transport | 9.58E-03 |
| 111 | GO:0042343: indole glucosinolate metabolic process | 9.58E-03 |
| 112 | GO:0010039: response to iron ion | 9.58E-03 |
| 113 | GO:0090351: seedling development | 9.58E-03 |
| 114 | GO:0044550: secondary metabolite biosynthetic process | 1.01E-02 |
| 115 | GO:0034976: response to endoplasmic reticulum stress | 1.03E-02 |
| 116 | GO:0048316: seed development | 1.08E-02 |
| 117 | GO:0009624: response to nematode | 1.26E-02 |
| 118 | GO:0098542: defense response to other organism | 1.27E-02 |
| 119 | GO:0051321: meiotic cell cycle | 1.27E-02 |
| 120 | GO:0006869: lipid transport | 1.28E-02 |
| 121 | GO:0080092: regulation of pollen tube growth | 1.36E-02 |
| 122 | GO:0071456: cellular response to hypoxia | 1.36E-02 |
| 123 | GO:0016226: iron-sulfur cluster assembly | 1.36E-02 |
| 124 | GO:0071369: cellular response to ethylene stimulus | 1.45E-02 |
| 125 | GO:0006012: galactose metabolic process | 1.45E-02 |
| 126 | GO:0042127: regulation of cell proliferation | 1.53E-02 |
| 127 | GO:0016117: carotenoid biosynthetic process | 1.62E-02 |
| 128 | GO:0070417: cellular response to cold | 1.62E-02 |
| 129 | GO:0008284: positive regulation of cell proliferation | 1.62E-02 |
| 130 | GO:0010051: xylem and phloem pattern formation | 1.72E-02 |
| 131 | GO:0010118: stomatal movement | 1.72E-02 |
| 132 | GO:0048868: pollen tube development | 1.81E-02 |
| 133 | GO:0055072: iron ion homeostasis | 2.00E-02 |
| 134 | GO:0009651: response to salt stress | 2.05E-02 |
| 135 | GO:0040008: regulation of growth | 2.08E-02 |
| 136 | GO:0009630: gravitropism | 2.20E-02 |
| 137 | GO:0030163: protein catabolic process | 2.31E-02 |
| 138 | GO:0042742: defense response to bacterium | 2.31E-02 |
| 139 | GO:0006914: autophagy | 2.41E-02 |
| 140 | GO:0007166: cell surface receptor signaling pathway | 2.49E-02 |
| 141 | GO:0006904: vesicle docking involved in exocytosis | 2.52E-02 |
| 142 | GO:0051607: defense response to virus | 2.62E-02 |
| 143 | GO:0016579: protein deubiquitination | 2.62E-02 |
| 144 | GO:0006906: vesicle fusion | 2.95E-02 |
| 145 | GO:0009416: response to light stimulus | 3.05E-02 |
| 146 | GO:0016049: cell growth | 3.18E-02 |
| 147 | GO:0015031: protein transport | 3.28E-02 |
| 148 | GO:0009817: defense response to fungus, incompatible interaction | 3.30E-02 |
| 149 | GO:0048767: root hair elongation | 3.42E-02 |
| 150 | GO:0010311: lateral root formation | 3.42E-02 |
| 151 | GO:0009407: toxin catabolic process | 3.54E-02 |
| 152 | GO:0006811: ion transport | 3.54E-02 |
| 153 | GO:0009860: pollen tube growth | 3.63E-02 |
| 154 | GO:0010043: response to zinc ion | 3.66E-02 |
| 155 | GO:0009910: negative regulation of flower development | 3.66E-02 |
| 156 | GO:0048527: lateral root development | 3.66E-02 |
| 157 | GO:0009631: cold acclimation | 3.66E-02 |
| 158 | GO:0009723: response to ethylene | 3.89E-02 |
| 159 | GO:0045087: innate immune response | 3.91E-02 |
| 160 | GO:0006839: mitochondrial transport | 4.29E-02 |
| 161 | GO:0006887: exocytosis | 4.41E-02 |
| 162 | GO:0042542: response to hydrogen peroxide | 4.55E-02 |
| 163 | GO:0009644: response to high light intensity | 4.94E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016504: peptidase activator activity | 0.00E+00 |
| 2 | GO:0051766: inositol trisphosphate kinase activity | 0.00E+00 |
| 3 | GO:0051670: inulinase activity | 0.00E+00 |
| 4 | GO:0070577: lysine-acetylated histone binding | 0.00E+00 |
| 5 | GO:0051765: inositol tetrakisphosphate kinase activity | 0.00E+00 |
| 6 | GO:0044610: FMN transmembrane transporter activity | 0.00E+00 |
| 7 | GO:0016853: isomerase activity | 1.66E-04 |
| 8 | GO:0008440: inositol-1,4,5-trisphosphate 3-kinase activity | 2.13E-04 |
| 9 | GO:2001227: quercitrin binding | 2.13E-04 |
| 10 | GO:0000824: inositol tetrakisphosphate 3-kinase activity | 2.13E-04 |
| 11 | GO:0051669: fructan beta-fructosidase activity | 2.13E-04 |
| 12 | GO:0047326: inositol tetrakisphosphate 5-kinase activity | 2.13E-04 |
| 13 | GO:0052631: sphingolipid delta-8 desaturase activity | 2.13E-04 |
| 14 | GO:0000823: inositol-1,4,5-trisphosphate 6-kinase activity | 2.13E-04 |
| 15 | GO:0048037: cofactor binding | 2.13E-04 |
| 16 | GO:0000386: second spliceosomal transesterification activity | 2.13E-04 |
| 17 | GO:0004633: phosphopantothenoylcysteine decarboxylase activity | 2.13E-04 |
| 18 | GO:0015230: FAD transmembrane transporter activity | 2.13E-04 |
| 19 | GO:0031219: levanase activity | 2.13E-04 |
| 20 | GO:0019786: Atg8-specific protease activity | 2.13E-04 |
| 21 | GO:2001147: camalexin binding | 2.13E-04 |
| 22 | GO:0008142: oxysterol binding | 2.25E-04 |
| 23 | GO:0004776: succinate-CoA ligase (GDP-forming) activity | 4.76E-04 |
| 24 | GO:0015228: coenzyme A transmembrane transporter activity | 4.76E-04 |
| 25 | GO:0008460: dTDP-glucose 4,6-dehydratase activity | 4.76E-04 |
| 26 | GO:0010280: UDP-L-rhamnose synthase activity | 4.76E-04 |
| 27 | GO:0051724: NAD transporter activity | 4.76E-04 |
| 28 | GO:0032934: sterol binding | 4.76E-04 |
| 29 | GO:0008428: ribonuclease inhibitor activity | 4.76E-04 |
| 30 | GO:1990585: hydroxyproline O-arabinosyltransferase activity | 4.76E-04 |
| 31 | GO:0004775: succinate-CoA ligase (ADP-forming) activity | 4.76E-04 |
| 32 | GO:0019779: Atg8 activating enzyme activity | 4.76E-04 |
| 33 | GO:0050377: UDP-glucose 4,6-dehydratase activity | 4.76E-04 |
| 34 | GO:0051980: iron-nicotianamine transmembrane transporter activity | 4.76E-04 |
| 35 | GO:0008517: folic acid transporter activity | 4.76E-04 |
| 36 | GO:0047443: 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity | 4.76E-04 |
| 37 | GO:0005524: ATP binding | 7.07E-04 |
| 38 | GO:0004867: serine-type endopeptidase inhibitor activity | 7.24E-04 |
| 39 | GO:0008061: chitin binding | 7.24E-04 |
| 40 | GO:0004970: ionotropic glutamate receptor activity | 7.24E-04 |
| 41 | GO:0005217: intracellular ligand-gated ion channel activity | 7.24E-04 |
| 42 | GO:0016301: kinase activity | 9.28E-04 |
| 43 | GO:0052725: inositol-1,3,4-trisphosphate 6-kinase activity | 1.10E-03 |
| 44 | GO:0004351: glutamate decarboxylase activity | 1.10E-03 |
| 45 | GO:0019201: nucleotide kinase activity | 1.10E-03 |
| 46 | GO:0004449: isocitrate dehydrogenase (NAD+) activity | 1.10E-03 |
| 47 | GO:0003727: single-stranded RNA binding | 1.38E-03 |
| 48 | GO:0070628: proteasome binding | 1.47E-03 |
| 49 | GO:0019776: Atg8 ligase activity | 1.47E-03 |
| 50 | GO:0016004: phospholipase activator activity | 1.47E-03 |
| 51 | GO:0009916: alternative oxidase activity | 1.47E-03 |
| 52 | GO:0004791: thioredoxin-disulfide reductase activity | 1.86E-03 |
| 53 | GO:0008948: oxaloacetate decarboxylase activity | 1.87E-03 |
| 54 | GO:0080122: AMP transmembrane transporter activity | 1.87E-03 |
| 55 | GO:0048040: UDP-glucuronate decarboxylase activity | 2.31E-03 |
| 56 | GO:0036402: proteasome-activating ATPase activity | 2.31E-03 |
| 57 | GO:0051020: GTPase binding | 2.77E-03 |
| 58 | GO:0015217: ADP transmembrane transporter activity | 2.77E-03 |
| 59 | GO:0070403: NAD+ binding | 2.77E-03 |
| 60 | GO:0004017: adenylate kinase activity | 2.77E-03 |
| 61 | GO:0005347: ATP transmembrane transporter activity | 2.77E-03 |
| 62 | GO:0043295: glutathione binding | 3.26E-03 |
| 63 | GO:0004714: transmembrane receptor protein tyrosine kinase activity | 3.78E-03 |
| 64 | GO:0004034: aldose 1-epimerase activity | 3.78E-03 |
| 65 | GO:0005544: calcium-dependent phospholipid binding | 3.78E-03 |
| 66 | GO:0004525: ribonuclease III activity | 3.78E-03 |
| 67 | GO:0004708: MAP kinase kinase activity | 3.78E-03 |
| 68 | GO:0005096: GTPase activator activity | 4.20E-03 |
| 69 | GO:0000149: SNARE binding | 5.53E-03 |
| 70 | GO:0030234: enzyme regulator activity | 6.12E-03 |
| 71 | GO:0004568: chitinase activity | 6.12E-03 |
| 72 | GO:0016308: 1-phosphatidylinositol-4-phosphate 5-kinase activity | 6.12E-03 |
| 73 | GO:0008047: enzyme activator activity | 6.12E-03 |
| 74 | GO:0005484: SNAP receptor activity | 6.53E-03 |
| 75 | GO:0008559: xenobiotic-transporting ATPase activity | 6.77E-03 |
| 76 | GO:0008327: methyl-CpG binding | 6.77E-03 |
| 77 | GO:0015198: oligopeptide transporter activity | 7.44E-03 |
| 78 | GO:0005388: calcium-transporting ATPase activity | 8.13E-03 |
| 79 | GO:0004565: beta-galactosidase activity | 8.13E-03 |
| 80 | GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | 8.13E-03 |
| 81 | GO:0004497: monooxygenase activity | 9.04E-03 |
| 82 | GO:0017025: TBP-class protein binding | 9.58E-03 |
| 83 | GO:0001046: core promoter sequence-specific DNA binding | 1.11E-02 |
| 84 | GO:0016874: ligase activity | 1.18E-02 |
| 85 | GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | 1.25E-02 |
| 86 | GO:0004540: ribonuclease activity | 1.27E-02 |
| 87 | GO:0004298: threonine-type endopeptidase activity | 1.27E-02 |
| 88 | GO:0005516: calmodulin binding | 1.48E-02 |
| 89 | GO:0003756: protein disulfide isomerase activity | 1.53E-02 |
| 90 | GO:0004499: N,N-dimethylaniline monooxygenase activity | 1.53E-02 |
| 91 | GO:0047134: protein-disulfide reductase activity | 1.62E-02 |
| 92 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 1.62E-02 |
| 93 | GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding | 1.80E-02 |
| 94 | GO:0005199: structural constituent of cell wall | 1.81E-02 |
| 95 | GO:0001085: RNA polymerase II transcription factor binding | 1.81E-02 |
| 96 | GO:0010181: FMN binding | 1.91E-02 |
| 97 | GO:0004872: receptor activity | 2.00E-02 |
| 98 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 2.03E-02 |
| 99 | GO:0004843: thiol-dependent ubiquitin-specific protease activity | 2.10E-02 |
| 100 | GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity | 2.52E-02 |
| 101 | GO:0003824: catalytic activity | 2.65E-02 |
| 102 | GO:0004683: calmodulin-dependent protein kinase activity | 3.07E-02 |
| 103 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 3.07E-02 |
| 104 | GO:0030247: polysaccharide binding | 3.07E-02 |
| 105 | GO:0000287: magnesium ion binding | 3.31E-02 |
| 106 | GO:0004601: peroxidase activity | 3.37E-02 |
| 107 | GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 3.66E-02 |
| 108 | GO:0004674: protein serine/threonine kinase activity | 4.16E-02 |
| 109 | GO:0050661: NADP binding | 4.29E-02 |
| 110 | GO:0030246: carbohydrate binding | 4.40E-02 |
| 111 | GO:0020037: heme binding | 4.48E-02 |
| 112 | GO:0004364: glutathione transferase activity | 4.55E-02 |
| 113 | GO:0046872: metal ion binding | 4.59E-02 |
| 114 | GO:0019825: oxygen binding | 4.71E-02 |
| 115 | GO:0035091: phosphatidylinositol binding | 4.94E-02 |