co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G23810

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0005996: monosaccharide metabolic process	0.00E+00
2	GO:0046471: phosphatidylglycerol metabolic process	0.00E+00
3	GO:1901918: negative regulation of exoribonuclease activity	0.00E+00
4	GO:0015979: photosynthesis	2.27E-07
5	GO:0018298: protein-chromophore linkage	8.18E-07
6	GO:0010207: photosystem II assembly	2.03E-05
7	GO:0010600: regulation of auxin biosynthetic process	2.40E-05
8	GO:0006636: unsaturated fatty acid biosynthetic process	2.96E-05
9	GO:0009768: photosynthesis, light harvesting in photosystem I	4.11E-05
10	GO:0010244: response to low fluence blue light stimulus by blue low-fluence system	8.05E-05
11	GO:0009704: de-etiolation	1.37E-04
12	GO:0010928: regulation of auxin mediated signaling pathway	1.37E-04
13	GO:0009658: chloroplast organization	1.43E-04
14	GO:0032544: plastid translation	1.72E-04
15	GO:0051180: vitamin transport	1.77E-04
16	GO:0071277: cellular response to calcium ion	1.77E-04
17	GO:0030974: thiamine pyrophosphate transport	1.77E-04
18	GO:0046467: membrane lipid biosynthetic process	1.77E-04
19	GO:0046900: tetrahydrofolylpolyglutamate metabolic process	1.77E-04
20	GO:1904966: positive regulation of vitamin E biosynthetic process	1.77E-04
21	GO:1904964: positive regulation of phytol biosynthetic process	1.77E-04
22	GO:0015995: chlorophyll biosynthetic process	2.94E-04
23	GO:0018119: peptidyl-cysteine S-nitrosylation	3.42E-04
24	GO:0010218: response to far red light	3.83E-04
25	GO:1902326: positive regulation of chlorophyll biosynthetic process	4.01E-04
26	GO:0015893: drug transport	4.01E-04
27	GO:0008616: queuosine biosynthetic process	4.01E-04
28	GO:0042819: vitamin B6 biosynthetic process	4.01E-04
29	GO:0009637: response to blue light	4.59E-04
30	GO:0055114: oxidation-reduction process	5.65E-04
31	GO:0010114: response to red light	6.32E-04
32	GO:0006081: cellular aldehyde metabolic process	6.55E-04
33	GO:0009585: red, far-red light phototransduction	9.17E-04
34	GO:0042823: pyridoxal phosphate biosynthetic process	9.34E-04
35	GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis	9.34E-04
36	GO:0071484: cellular response to light intensity	9.34E-04
37	GO:0019722: calcium-mediated signaling	1.07E-03
38	GO:0006546: glycine catabolic process	1.24E-03
39	GO:0010021: amylopectin biosynthetic process	1.24E-03
40	GO:0015689: molybdate ion transport	1.24E-03
41	GO:0009765: photosynthesis, light harvesting	1.24E-03
42	GO:0006183: GTP biosynthetic process	1.24E-03
43	GO:0045727: positive regulation of translation	1.24E-03
44	GO:0015994: chlorophyll metabolic process	1.24E-03
45	GO:0019252: starch biosynthetic process	1.55E-03
46	GO:0043097: pyrimidine nucleoside salvage	1.57E-03
47	GO:0035434: copper ion transmembrane transport	1.57E-03
48	GO:0009107: lipoate biosynthetic process	1.57E-03
49	GO:0006206: pyrimidine nucleobase metabolic process	1.94E-03
50	GO:0010190: cytochrome b6f complex assembly	1.94E-03
51	GO:0006086: acetyl-CoA biosynthetic process from pyruvate	1.94E-03
52	GO:0032259: methylation	2.10E-03
53	GO:0007267: cell-cell signaling	2.12E-03
54	GO:0045926: negative regulation of growth	2.32E-03
55	GO:0017148: negative regulation of translation	2.32E-03
56	GO:0010189: vitamin E biosynthetic process	2.32E-03
57	GO:0006810: transport	2.46E-03
58	GO:0009769: photosynthesis, light harvesting in photosystem II	2.74E-03
59	GO:1900057: positive regulation of leaf senescence	2.74E-03
60	GO:0009645: response to low light intensity stimulus	2.74E-03
61	GO:0010161: red light signaling pathway	2.74E-03
62	GO:1900056: negative regulation of leaf senescence	2.74E-03
63	GO:0009231: riboflavin biosynthetic process	3.17E-03
64	GO:0005978: glycogen biosynthetic process	3.17E-03
65	GO:0009657: plastid organization	3.63E-03
66	GO:0009932: cell tip growth	3.63E-03
67	GO:0071482: cellular response to light stimulus	3.63E-03
68	GO:0034599: cellular response to oxidative stress	4.09E-03
69	GO:0010206: photosystem II repair	4.10E-03
70	GO:0034765: regulation of ion transmembrane transport	4.10E-03
71	GO:0090333: regulation of stomatal closure	4.10E-03
72	GO:0006783: heme biosynthetic process	4.10E-03
73	GO:0006754: ATP biosynthetic process	4.10E-03
74	GO:0009245: lipid A biosynthetic process	4.10E-03
75	GO:0010380: regulation of chlorophyll biosynthetic process	4.60E-03
76	GO:0010267: production of ta-siRNAs involved in RNA interference	4.60E-03
77	GO:0042761: very long-chain fatty acid biosynthetic process	4.60E-03
78	GO:0010205: photoinhibition	4.60E-03
79	GO:0006779: porphyrin-containing compound biosynthetic process	4.60E-03
80	GO:0006782: protoporphyrinogen IX biosynthetic process	5.11E-03
81	GO:0009416: response to light stimulus	5.37E-03
82	GO:0009773: photosynthetic electron transport in photosystem I	5.65E-03
83	GO:0019684: photosynthesis, light reaction	5.65E-03
84	GO:0000272: polysaccharide catabolic process	5.65E-03
85	GO:0009698: phenylpropanoid metabolic process	5.65E-03
86	GO:0016925: protein sumoylation	6.20E-03
87	GO:0009767: photosynthetic electron transport chain	6.78E-03
88	GO:0009409: response to cold	7.34E-03
89	GO:0006541: glutamine metabolic process	7.37E-03
90	GO:0019253: reductive pentose-phosphate cycle	7.37E-03
91	GO:0010025: wax biosynthetic process	8.61E-03
92	GO:0009833: plant-type primary cell wall biogenesis	8.61E-03
93	GO:0019762: glucosinolate catabolic process	8.61E-03
94	GO:0006869: lipid transport	9.17E-03
95	GO:0006406: mRNA export from nucleus	9.26E-03
96	GO:0006825: copper ion transport	9.92E-03
97	GO:0019953: sexual reproduction	9.92E-03
98	GO:0006396: RNA processing	9.95E-03
99	GO:0031408: oxylipin biosynthetic process	1.06E-02
100	GO:0061077: chaperone-mediated protein folding	1.06E-02
101	GO:0009269: response to desiccation	1.06E-02
102	GO:0030433: ubiquitin-dependent ERAD pathway	1.13E-02
103	GO:0030245: cellulose catabolic process	1.13E-02
104	GO:0010017: red or far-red light signaling pathway	1.13E-02
105	GO:0009693: ethylene biosynthetic process	1.20E-02
106	GO:0006817: phosphate ion transport	1.27E-02
107	GO:0009306: protein secretion	1.27E-02
108	GO:0042391: regulation of membrane potential	1.43E-02
109	GO:0042631: cellular response to water deprivation	1.43E-02
110	GO:0006662: glycerol ether metabolic process	1.50E-02
111	GO:0048868: pollen tube development	1.50E-02
112	GO:0009741: response to brassinosteroid	1.50E-02
113	GO:0006814: sodium ion transport	1.58E-02
114	GO:0009646: response to absence of light	1.58E-02
115	GO:0007623: circadian rhythm	1.68E-02
116	GO:0010583: response to cyclopentenone	1.83E-02
117	GO:0031047: gene silencing by RNA	1.83E-02
118	GO:0071805: potassium ion transmembrane transport	2.09E-02
119	GO:0010411: xyloglucan metabolic process	2.55E-02
120	GO:0030244: cellulose biosynthetic process	2.74E-02
121	GO:0006499: N-terminal protein myristoylation	2.94E-02
122	GO:0055085: transmembrane transport	2.97E-02
123	GO:0009910: negative regulation of flower development	3.04E-02
124	GO:0006839: mitochondrial transport	3.56E-02
125	GO:0045454: cell redox homeostasis	3.85E-02
126	GO:0000209: protein polyubiquitination	4.00E-02
127	GO:0042546: cell wall biogenesis	4.00E-02
128	GO:0009644: response to high light intensity	4.11E-02
129	GO:0016042: lipid catabolic process	4.60E-02
130	GO:0006364: rRNA processing	4.80E-02
131	GO:0006397: mRNA processing	4.93E-02

Rank	GO Term	Adjusted P value
1	GO:0045550: geranylgeranyl reductase activity	0.00E+00
2	GO:0009979: 16:0 monogalactosyldiacylglycerol desaturase activity	0.00E+00
3	GO:0008974: phosphoribulokinase activity	0.00E+00
4	GO:0019146: arabinose-5-phosphate isomerase activity	0.00E+00
5	GO:0035798: 2-alkenal reductase (NADP+) activity	0.00E+00
6	GO:0052637: delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase activity	0.00E+00
7	GO:0046863: ribulose-1,5-bisphosphate carboxylase/oxygenase activator activity	0.00E+00
8	GO:0030794: (S)-coclaurine-N-methyltransferase activity	0.00E+00
9	GO:0030504: inorganic diphosphate transmembrane transporter activity	0.00E+00
10	GO:0016754: sinapoylglucose-malate O-sinapoyltransferase activity	0.00E+00
11	GO:0009673: low-affinity phosphate transmembrane transporter activity	0.00E+00
12	GO:0018708: thiol S-methyltransferase activity	1.52E-06
13	GO:0016168: chlorophyll binding	1.47E-05
14	GO:0031409: pigment binding	2.96E-05
15	GO:0048038: quinone binding	1.40E-04
16	GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	1.72E-04
17	GO:0010313: phytochrome binding	1.77E-04
18	GO:0008242: omega peptidase activity	1.77E-04
19	GO:0035671: enone reductase activity	1.77E-04
20	GO:0004451: isocitrate lyase activity	1.77E-04
21	GO:0090422: thiamine pyrophosphate transporter activity	1.77E-04
22	GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity	4.01E-04
23	GO:0036381: pyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity	4.01E-04
24	GO:0004802: transketolase activity	4.01E-04
25	GO:0034722: gamma-glutamyl-peptidase activity	4.01E-04
26	GO:0008883: glutamyl-tRNA reductase activity	4.01E-04
27	GO:0047746: chlorophyllase activity	4.01E-04
28	GO:0010297: heteropolysaccharide binding	4.01E-04
29	GO:0008686: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity	4.01E-04
30	GO:0003938: IMP dehydrogenase activity	4.01E-04
31	GO:0004047: aminomethyltransferase activity	4.01E-04
32	GO:0033201: alpha-1,4-glucan synthase activity	4.01E-04
33	GO:0008479: queuine tRNA-ribosyltransferase activity	4.01E-04
34	GO:0004565: beta-galactosidase activity	4.47E-04
35	GO:0005315: inorganic phosphate transmembrane transporter activity	4.47E-04
36	GO:0016491: oxidoreductase activity	5.47E-04
37	GO:0003913: DNA photolyase activity	6.55E-04
38	GO:0003935: GTP cyclohydrolase II activity	6.55E-04
39	GO:0004030: aldehyde dehydrogenase [NAD(P)+] activity	6.55E-04
40	GO:0019948: SUMO activating enzyme activity	6.55E-04
41	GO:0010277: chlorophyllide a oxygenase [overall] activity	6.55E-04
42	GO:0004373: glycogen (starch) synthase activity	6.55E-04
43	GO:0016992: lipoate synthase activity	6.55E-04
44	GO:0042802: identical protein binding	6.71E-04
45	GO:0008168: methyltransferase activity	8.53E-04
46	GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	9.34E-04
47	GO:0048027: mRNA 5'-UTR binding	9.34E-04
48	GO:0015098: molybdate ion transmembrane transporter activity	1.24E-03
49	GO:0043495: protein anchor	1.24E-03
50	GO:0009011: starch synthase activity	1.24E-03
51	GO:0008878: glucose-1-phosphate adenylyltransferase activity	1.24E-03
52	GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity	1.24E-03
53	GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	1.57E-03
54	GO:0004029: aldehyde dehydrogenase (NAD) activity	1.94E-03
55	GO:0031177: phosphopantetheine binding	1.94E-03
56	GO:0004849: uridine kinase activity	2.32E-03
57	GO:0000035: acyl binding	2.32E-03
58	GO:0005242: inward rectifier potassium channel activity	2.32E-03
59	GO:0019899: enzyme binding	2.74E-03
60	GO:0009881: photoreceptor activity	2.74E-03
61	GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process	3.17E-03
62	GO:0005375: copper ion transmembrane transporter activity	3.63E-03
63	GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism	4.10E-03
64	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	4.60E-03
65	GO:0030234: enzyme regulator activity	5.11E-03
66	GO:0015293: symporter activity	5.66E-03
67	GO:0031072: heat shock protein binding	6.78E-03
68	GO:0052689: carboxylic ester hydrolase activity	7.37E-03
69	GO:0004871: signal transducer activity	8.65E-03
70	GO:0003954: NADH dehydrogenase activity	9.26E-03
71	GO:0005528: FK506 binding	9.26E-03
72	GO:0008810: cellulase activity	1.20E-02
73	GO:0016760: cellulose synthase (UDP-forming) activity	1.20E-02
74	GO:0022891: substrate-specific transmembrane transporter activity	1.20E-02
75	GO:0003727: single-stranded RNA binding	1.27E-02
76	GO:0008514: organic anion transmembrane transporter activity	1.27E-02
77	GO:0047134: protein-disulfide reductase activity	1.35E-02
78	GO:0005249: voltage-gated potassium channel activity	1.43E-02
79	GO:0030551: cyclic nucleotide binding	1.43E-02
80	GO:0008080: N-acetyltransferase activity	1.50E-02
81	GO:0010181: FMN binding	1.58E-02
82	GO:0050662: coenzyme binding	1.58E-02
83	GO:0004791: thioredoxin-disulfide reductase activity	1.58E-02
84	GO:0016762: xyloglucan:xyloglucosyl transferase activity	1.75E-02
85	GO:0004518: nuclease activity	1.83E-02
86	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.91E-02
87	GO:0016791: phosphatase activity	2.00E-02
88	GO:0016759: cellulose synthase activity	2.00E-02
89	GO:0016722: oxidoreductase activity, oxidizing metal ions	2.09E-02
90	GO:0008483: transaminase activity	2.09E-02
91	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	2.13E-02
92	GO:0004721: phosphoprotein phosphatase activity	2.55E-02
93	GO:0016798: hydrolase activity, acting on glycosyl bonds	2.55E-02
94	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	2.64E-02
95	GO:0030145: manganese ion binding	3.04E-02
96	GO:0003746: translation elongation factor activity	3.24E-02
97	GO:0005507: copper ion binding	3.42E-02
98	GO:0050661: NADP binding	3.56E-02
99	GO:0004185: serine-type carboxypeptidase activity	3.88E-02
100	GO:0051537: 2 iron, 2 sulfur cluster binding	4.11E-02
101	GO:0043621: protein self-association	4.11E-02
102	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	4.33E-02
103	GO:0016298: lipase activity	4.92E-02