Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G23560

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1900409: positive regulation of cellular response to oxidative stress0.00E+00
2GO:0001789: G-protein coupled receptor signaling pathway, coupled to S1P second messenger0.00E+00
3GO:0031338: regulation of vesicle fusion4.31E-05
4GO:0060862: negative regulation of floral organ abscission4.31E-05
5GO:0071280: cellular response to copper ion4.31E-05
6GO:0046208: spermine catabolic process4.31E-05
7GO:1902600: hydrogen ion transmembrane transport4.31E-05
8GO:0046256: 2,4,6-trinitrotoluene catabolic process4.31E-05
9GO:0034214: protein hexamerization4.31E-05
10GO:0015865: purine nucleotide transport1.07E-04
11GO:1902000: homogentisate catabolic process1.07E-04
12GO:2000693: positive regulation of seed maturation1.07E-04
13GO:0042814: monopolar cell growth1.07E-04
14GO:0006123: mitochondrial electron transport, cytochrome c to oxygen1.07E-04
15GO:0031349: positive regulation of defense response1.07E-04
16GO:1901703: protein localization involved in auxin polar transport1.07E-04
17GO:0080026: response to indolebutyric acid1.07E-04
18GO:0071457: cellular response to ozone1.07E-04
19GO:0006501: C-terminal protein lipidation1.07E-04
20GO:0009062: fatty acid catabolic process1.84E-04
21GO:0090630: activation of GTPase activity1.84E-04
22GO:0009072: aromatic amino acid family metabolic process1.84E-04
23GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway1.84E-04
24GO:0006598: polyamine catabolic process1.84E-04
25GO:0006556: S-adenosylmethionine biosynthetic process1.84E-04
26GO:0080024: indolebutyric acid metabolic process2.70E-04
27GO:0006571: tyrosine biosynthetic process2.70E-04
28GO:0071484: cellular response to light intensity2.70E-04
29GO:0046902: regulation of mitochondrial membrane permeability2.70E-04
30GO:0071329: cellular response to sucrose stimulus2.70E-04
31GO:0006464: cellular protein modification process3.21E-04
32GO:0042594: response to starvation3.64E-04
33GO:0044804: nucleophagy3.64E-04
34GO:0000919: cell plate assembly3.64E-04
35GO:0006564: L-serine biosynthetic process4.63E-04
36GO:0071493: cellular response to UV-B4.63E-04
37GO:0009164: nucleoside catabolic process4.63E-04
38GO:0016131: brassinosteroid metabolic process4.63E-04
39GO:0000422: mitophagy4.63E-04
40GO:0009407: toxin catabolic process5.47E-04
41GO:0010942: positive regulation of cell death5.67E-04
42GO:0009228: thiamine biosynthetic process5.67E-04
43GO:0000045: autophagosome assembly5.67E-04
44GO:0060918: auxin transport5.67E-04
45GO:0006694: steroid biosynthetic process6.76E-04
46GO:0010244: response to low fluence blue light stimulus by blue low-fluence system6.76E-04
47GO:0009094: L-phenylalanine biosynthetic process6.76E-04
48GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c7.90E-04
49GO:0055114: oxidation-reduction process8.25E-04
50GO:0009636: response to toxic substance8.91E-04
51GO:0007186: G-protein coupled receptor signaling pathway1.03E-03
52GO:0010497: plasmodesmata-mediated intercellular transport1.03E-03
53GO:0019430: removal of superoxide radicals1.03E-03
54GO:0090333: regulation of stomatal closure1.16E-03
55GO:0046685: response to arsenic-containing substance1.16E-03
56GO:0030042: actin filament depolymerization1.29E-03
57GO:0048354: mucilage biosynthetic process involved in seed coat development1.29E-03
58GO:2000280: regulation of root development1.29E-03
59GO:0006995: cellular response to nitrogen starvation1.43E-03
60GO:0019538: protein metabolic process1.43E-03
61GO:0072593: reactive oxygen species metabolic process1.57E-03
62GO:0071365: cellular response to auxin stimulus1.72E-03
63GO:0055046: microgametogenesis1.87E-03
64GO:0010102: lateral root morphogenesis1.87E-03
65GO:0009785: blue light signaling pathway1.87E-03
66GO:0006807: nitrogen compound metabolic process1.87E-03
67GO:0010540: basipetal auxin transport2.03E-03
68GO:0046688: response to copper ion2.19E-03
69GO:0010039: response to iron ion2.19E-03
70GO:0010150: leaf senescence2.52E-03
71GO:0006730: one-carbon metabolic process3.06E-03
72GO:0009693: ethylene biosynthetic process3.24E-03
73GO:0071215: cellular response to abscisic acid stimulus3.24E-03
74GO:0042127: regulation of cell proliferation3.43E-03
75GO:0009561: megagametogenesis3.43E-03
76GO:0006817: phosphate ion transport3.43E-03
77GO:0009789: positive regulation of abscisic acid-activated signaling pathway3.63E-03
78GO:0071472: cellular response to salt stress4.02E-03
79GO:0009749: response to glucose4.43E-03
80GO:0006635: fatty acid beta-oxidation4.64E-03
81GO:0010193: response to ozone4.64E-03
82GO:0032502: developmental process4.86E-03
83GO:0009630: gravitropism4.86E-03
84GO:0071281: cellular response to iron ion5.07E-03
85GO:0006914: autophagy5.30E-03
86GO:0071805: potassium ion transmembrane transport5.52E-03
87GO:0006904: vesicle docking involved in exocytosis5.52E-03
88GO:0010027: thylakoid membrane organization5.98E-03
89GO:0009788: negative regulation of abscisic acid-activated signaling pathway6.21E-03
90GO:0008219: cell death7.19E-03
91GO:0048364: root development7.39E-03
92GO:0048767: root hair elongation7.43E-03
93GO:0006499: N-terminal protein myristoylation7.69E-03
94GO:0007568: aging7.95E-03
95GO:0010119: regulation of stomatal movement7.95E-03
96GO:0046686: response to cadmium ion8.41E-03
97GO:0016051: carbohydrate biosynthetic process8.47E-03
98GO:0035195: gene silencing by miRNA8.47E-03
99GO:0034599: cellular response to oxidative stress8.74E-03
100GO:0006839: mitochondrial transport9.28E-03
101GO:0006887: exocytosis9.56E-03
102GO:0008283: cell proliferation1.01E-02
103GO:0000209: protein polyubiquitination1.04E-02
104GO:0031347: regulation of defense response1.16E-02
105GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process1.16E-02
106GO:0009809: lignin biosynthetic process1.25E-02
107GO:0006813: potassium ion transport1.25E-02
108GO:0051603: proteolysis involved in cellular protein catabolic process1.28E-02
109GO:0009740: gibberellic acid mediated signaling pathway1.54E-02
110GO:0009742: brassinosteroid mediated signaling pathway1.67E-02
111GO:0051726: regulation of cell cycle1.67E-02
112GO:0006511: ubiquitin-dependent protein catabolic process1.71E-02
113GO:0009058: biosynthetic process1.95E-02
114GO:0016567: protein ubiquitination1.97E-02
115GO:0009845: seed germination1.99E-02
116GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process2.56E-02
117GO:0009658: chloroplast organization3.22E-02
118GO:0015031: protein transport3.25E-02
119GO:0080167: response to karrikin3.76E-02
120GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway3.85E-02
121GO:0006886: intracellular protein transport4.37E-02
122GO:0009751: response to salicylic acid4.90E-02
123GO:0006629: lipid metabolic process4.95E-02
RankGO TermAdjusted P value
1GO:0016034: maleylacetoacetate isomerase activity0.00E+00
2GO:0016247: channel regulator activity0.00E+00
3GO:0005095: GTPase inhibitor activity0.00E+00
4GO:0004364: glutathione transferase activity4.26E-05
5GO:0052894: norspermine:oxygen oxidoreductase activity4.31E-05
6GO:0052895: N1-acetylspermine:oxygen oxidoreductase (N1-acetylspermidine-forming) activity4.31E-05
7GO:0019172: glyoxalase III activity1.07E-04
8GO:0052901: spermine:oxygen oxidoreductase (spermidine-forming) activity1.07E-04
9GO:0004617: phosphoglycerate dehydrogenase activity1.07E-04
10GO:0022821: potassium ion antiporter activity1.07E-04
11GO:0034432: bis(5'-adenosyl)-pentaphosphatase activity1.07E-04
12GO:0050736: O-malonyltransferase activity1.07E-04
13GO:0003955: NAD(P)H dehydrogenase (quinone) activity1.84E-04
14GO:0004478: methionine adenosyltransferase activity1.84E-04
15GO:0001664: G-protein coupled receptor binding1.84E-04
16GO:0046592: polyamine oxidase activity1.84E-04
17GO:0003854: 3-beta-hydroxy-delta5-steroid dehydrogenase activity1.84E-04
18GO:0031683: G-protein beta/gamma-subunit complex binding1.84E-04
19GO:0022890: inorganic cation transmembrane transporter activity2.70E-04
20GO:0004165: dodecenoyl-CoA delta-isomerase activity2.70E-04
21GO:0019776: Atg8 ligase activity3.64E-04
22GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor3.64E-04
23GO:0005471: ATP:ADP antiporter activity4.63E-04
24GO:0017137: Rab GTPase binding4.63E-04
25GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity5.67E-04
26GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity5.67E-04
27GO:0004784: superoxide dismutase activity5.67E-04
28GO:0051020: GTPase binding6.76E-04
29GO:0043295: glutathione binding7.90E-04
30GO:0052747: sinapyl alcohol dehydrogenase activity9.08E-04
31GO:0004714: transmembrane receptor protein tyrosine kinase activity9.08E-04
32GO:0071949: FAD binding1.16E-03
33GO:0045735: nutrient reservoir activity1.24E-03
34GO:0004713: protein tyrosine kinase activity1.43E-03
35GO:0003779: actin binding1.44E-03
36GO:0015386: potassium:proton antiporter activity1.57E-03
37GO:0045551: cinnamyl-alcohol dehydrogenase activity1.72E-03
38GO:0015095: magnesium ion transmembrane transporter activity1.87E-03
39GO:0008134: transcription factor binding2.52E-03
40GO:0016740: transferase activity2.53E-03
41GO:0015079: potassium ion transmembrane transporter activity2.70E-03
42GO:0015299: solute:proton antiporter activity4.23E-03
43GO:0010181: FMN binding4.23E-03
44GO:0061630: ubiquitin protein ligase activity5.05E-03
45GO:0003824: catalytic activity5.39E-03
46GO:0016597: amino acid binding5.75E-03
47GO:0008375: acetylglucosaminyltransferase activity6.45E-03
48GO:0004806: triglyceride lipase activity6.69E-03
49GO:0003924: GTPase activity7.08E-03
50GO:0005096: GTPase activator activity7.43E-03
51GO:0030145: manganese ion binding7.95E-03
52GO:0051287: NAD binding1.16E-02
53GO:0031625: ubiquitin protein ligase binding1.34E-02
54GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups1.44E-02
55GO:0008270: zinc ion binding1.45E-02
56GO:0005507: copper ion binding1.80E-02
57GO:0030170: pyridoxal phosphate binding2.02E-02
58GO:0005525: GTP binding2.08E-02
59GO:0005515: protein binding2.17E-02
60GO:0046982: protein heterodimerization activity3.18E-02
61GO:0004601: peroxidase activity3.22E-02
62GO:0004842: ubiquitin-protein transferase activity3.53E-02
63GO:0050660: flavin adenine dinucleotide binding3.58E-02
64GO:0004497: monooxygenase activity3.76E-02
65GO:0042803: protein homodimerization activity4.41E-02
66GO:0004871: signal transducer activity4.41E-02
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Gene type



Gene DE type