Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G23480

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0090697: post-embryonic plant organ morphogenesis0.00E+00
2GO:0006480: N-terminal protein amino acid methylation0.00E+00
3GO:2000469: negative regulation of peroxidase activity0.00E+00
4GO:2000121: regulation of removal of superoxide radicals0.00E+00
5GO:0009647: skotomorphogenesis1.76E-04
6GO:0009963: positive regulation of flavonoid biosynthetic process1.76E-04
7GO:0048442: sepal development2.39E-04
8GO:0009649: entrainment of circadian clock2.39E-04
9GO:0032366: intracellular sterol transport2.39E-04
10GO:0046283: anthocyanin-containing compound metabolic process3.07E-04
11GO:0006665: sphingolipid metabolic process3.07E-04
12GO:0034052: positive regulation of plant-type hypersensitive response3.07E-04
13GO:0010076: maintenance of floral meristem identity4.53E-04
14GO:0048280: vesicle fusion with Golgi apparatus4.53E-04
15GO:2000033: regulation of seed dormancy process4.53E-04
16GO:0000122: negative regulation of transcription from RNA polymerase II promoter5.30E-04
17GO:0030307: positive regulation of cell growth5.30E-04
18GO:0043068: positive regulation of programmed cell death6.10E-04
19GO:0007155: cell adhesion6.10E-04
20GO:0009641: shade avoidance9.59E-04
21GO:0006896: Golgi to vacuole transport9.59E-04
22GO:0048441: petal development9.59E-04
23GO:0048440: carpel development1.35E-03
24GO:0019915: lipid storage1.90E-03
25GO:0048278: vesicle docking1.90E-03
26GO:0009814: defense response, incompatible interaction2.02E-03
27GO:0009294: DNA mediated transformation2.14E-03
28GO:0071369: cellular response to ethylene stimulus2.14E-03
29GO:0048443: stamen development2.26E-03
30GO:0042147: retrograde transport, endosome to Golgi2.39E-03
31GO:0061025: membrane fusion2.78E-03
32GO:0009646: response to absence of light2.78E-03
33GO:0006623: protein targeting to vacuole2.91E-03
34GO:0006891: intra-Golgi vesicle-mediated transport3.05E-03
35GO:0016125: sterol metabolic process3.47E-03
36GO:0010252: auxin homeostasis3.47E-03
37GO:0006906: vesicle fusion4.22E-03
38GO:0048573: photoperiodism, flowering4.37E-03
39GO:0006888: ER to Golgi vesicle-mediated transport4.37E-03
40GO:0048527: lateral root development5.18E-03
41GO:0010119: regulation of stomatal movement5.18E-03
42GO:0006887: exocytosis6.21E-03
43GO:0009640: photomorphogenesis6.57E-03
44GO:0000165: MAPK cascade7.50E-03
45GO:0009585: red, far-red light phototransduction8.08E-03
46GO:0010224: response to UV-B8.28E-03
47GO:0009909: regulation of flower development8.68E-03
48GO:0009626: plant-type hypersensitive response9.50E-03
49GO:0042744: hydrogen peroxide catabolic process1.33E-02
50GO:0030154: cell differentiation1.49E-02
51GO:0010150: leaf senescence1.52E-02
52GO:0045490: pectin catabolic process1.52E-02
53GO:0009739: response to gibberellin1.65E-02
54GO:0009617: response to bacterium1.73E-02
55GO:0045944: positive regulation of transcription from RNA polymerase II promoter1.97E-02
56GO:0009658: chloroplast organization2.07E-02
57GO:0009723: response to ethylene2.30E-02
58GO:0048366: leaf development2.33E-02
59GO:0044550: secondary metabolite biosynthetic process2.57E-02
60GO:0045892: negative regulation of transcription, DNA-templated2.78E-02
61GO:0006886: intracellular protein transport2.81E-02
62GO:0007165: signal transduction2.86E-02
63GO:0009751: response to salicylic acid3.16E-02
64GO:0006281: DNA repair3.19E-02
65GO:0009753: response to jasmonic acid3.36E-02
66GO:0016567: protein ubiquitination4.16E-02
67GO:0009416: response to light stimulus4.80E-02
68GO:0009555: pollen development4.80E-02
RankGO TermAdjusted P value
1GO:0097100: supercoiled DNA binding0.00E+00
2GO:0047259: glucomannan 4-beta-mannosyltransferase activity2.64E-05
3GO:0000149: SNARE binding3.73E-04
4GO:0005484: SNAP receptor activity4.38E-04
5GO:0051753: mannan synthase activity4.53E-04
6GO:0000976: transcription regulatory region sequence-specific DNA binding1.15E-03
7GO:0030570: pectate lyase activity2.14E-03
8GO:0035091: phosphatidylinositol binding6.94E-03
9GO:0016829: lyase activity1.28E-02
10GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding1.33E-02
11GO:0008270: zinc ion binding1.36E-02
12GO:0008565: protein transporter activity1.38E-02
13GO:0008017: microtubule binding1.57E-02
14GO:0042802: identical protein binding1.80E-02
15GO:0004842: ubiquitin-protein transferase activity1.89E-02
16GO:0004601: peroxidase activity2.07E-02
17GO:0020037: heme binding2.16E-02
18GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen2.91E-02
19GO:0003700: transcription factor activity, sequence-specific DNA binding4.94E-02
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Gene type



Gene DE type