co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G22820

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0090322: regulation of superoxide metabolic process	0.00E+00
2	GO:1901528: hydrogen peroxide mediated signaling pathway involved in stomatal movement	0.00E+00
3	GO:0080127: fruit septum development	0.00E+00
4	GO:0032268: regulation of cellular protein metabolic process	0.00E+00
5	GO:0019988: charged-tRNA amino acid modification	0.00E+00
6	GO:0045014: negative regulation of transcription by glucose	0.00E+00
7	GO:0071951: conversion of methionyl-tRNA to N-formyl-methionyl-tRNA	0.00E+00
8	GO:0006353: DNA-templated transcription, termination	1.56E-04
9	GO:0036228: protein targeting to nuclear inner membrane	1.93E-04
10	GO:0033206: meiotic cytokinesis	1.93E-04
11	GO:0006999: nuclear pore organization	1.93E-04
12	GO:0048829: root cap development	3.32E-04
13	GO:2000071: regulation of defense response by callose deposition	4.33E-04
14	GO:1901529: positive regulation of anion channel activity	4.33E-04
15	GO:0048731: system development	4.33E-04
16	GO:0010588: cotyledon vascular tissue pattern formation	5.01E-04
17	GO:1901527: abscisic acid-activated signaling pathway involved in stomatal movement	7.06E-04
18	GO:0003333: amino acid transmembrane transport	9.35E-04
19	GO:0006168: adenine salvage	1.01E-03
20	GO:0006166: purine ribonucleoside salvage	1.01E-03
21	GO:0009102: biotin biosynthetic process	1.01E-03
22	GO:0009152: purine ribonucleotide biosynthetic process	1.01E-03
23	GO:0007276: gamete generation	1.01E-03
24	GO:2000022: regulation of jasmonic acid mediated signaling pathway	1.02E-03
25	GO:0042127: regulation of cell proliferation	1.20E-03
26	GO:2000032: regulation of secondary shoot formation	1.34E-03
27	GO:0006808: regulation of nitrogen utilization	1.34E-03
28	GO:1900864: mitochondrial RNA modification	1.34E-03
29	GO:0016131: brassinosteroid metabolic process	1.70E-03
30	GO:0044209: AMP salvage	1.70E-03
31	GO:0009733: response to auxin	1.83E-03
32	GO:0003006: developmental process involved in reproduction	2.10E-03
33	GO:0009643: photosynthetic acclimation	2.10E-03
34	GO:1904668: positive regulation of ubiquitin protein ligase activity	2.10E-03
35	GO:0035435: phosphate ion transmembrane transport	2.10E-03
36	GO:0032259: methylation	2.52E-03
37	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	2.52E-03
38	GO:0010310: regulation of hydrogen peroxide metabolic process	2.52E-03
39	GO:2000033: regulation of seed dormancy process	2.52E-03
40	GO:0010098: suspensor development	2.96E-03
41	GO:0010103: stomatal complex morphogenesis	2.96E-03
42	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	2.96E-03
43	GO:0009938: negative regulation of gibberellic acid mediated signaling pathway	3.43E-03
44	GO:0010492: maintenance of shoot apical meristem identity	3.43E-03
45	GO:0009787: regulation of abscisic acid-activated signaling pathway	3.43E-03
46	GO:0042255: ribosome assembly	3.43E-03
47	GO:0046620: regulation of organ growth	3.43E-03
48	GO:0007186: G-protein coupled receptor signaling pathway	3.93E-03
49	GO:0010233: phloem transport	3.93E-03
50	GO:0006865: amino acid transport	4.20E-03
51	GO:0009867: jasmonic acid mediated signaling pathway	4.40E-03
52	GO:0048589: developmental growth	4.44E-03
53	GO:0006607: NLS-bearing protein import into nucleus	4.44E-03
54	GO:0048507: meristem development	4.44E-03
55	GO:0009734: auxin-activated signaling pathway	4.53E-03
56	GO:0030001: metal ion transport	5.01E-03
57	GO:0006535: cysteine biosynthetic process from serine	5.55E-03
58	GO:0006949: syncytium formation	5.55E-03
59	GO:0009658: chloroplast organization	5.73E-03
60	GO:1903507: negative regulation of nucleic acid-templated transcription	6.13E-03
61	GO:0009750: response to fructose	6.13E-03
62	GO:0009682: induced systemic resistance	6.13E-03
63	GO:0010152: pollen maturation	6.73E-03
64	GO:0012501: programmed cell death	6.73E-03
65	GO:0010582: floral meristem determinacy	6.73E-03
66	GO:0031347: regulation of defense response	6.85E-03
67	GO:0046274: lignin catabolic process	7.36E-03
68	GO:0010102: lateral root morphogenesis	7.36E-03
69	GO:0006270: DNA replication initiation	8.01E-03
70	GO:0009887: animal organ morphogenesis	8.01E-03
71	GO:0048467: gynoecium development	8.01E-03
72	GO:0010020: chloroplast fission	8.01E-03
73	GO:0048367: shoot system development	9.32E-03
74	GO:0006636: unsaturated fatty acid biosynthetic process	9.35E-03
75	GO:0010187: negative regulation of seed germination	1.01E-02
76	GO:2000377: regulation of reactive oxygen species metabolic process	1.01E-02
77	GO:0019344: cysteine biosynthetic process	1.01E-02
78	GO:0009863: salicylic acid mediated signaling pathway	1.01E-02
79	GO:0009740: gibberellic acid mediated signaling pathway	1.02E-02
80	GO:0006825: copper ion transport	1.08E-02
81	GO:0006874: cellular calcium ion homeostasis	1.08E-02
82	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	1.31E-02
83	GO:0048443: stamen development	1.39E-02
84	GO:0006284: base-excision repair	1.39E-02
85	GO:0009058: biosynthetic process	1.44E-02
86	GO:0051028: mRNA transport	1.47E-02
87	GO:0080022: primary root development	1.55E-02
88	GO:0010501: RNA secondary structure unwinding	1.55E-02
89	GO:0010087: phloem or xylem histogenesis	1.55E-02
90	GO:0010118: stomatal movement	1.55E-02
91	GO:0009741: response to brassinosteroid	1.63E-02
92	GO:0010268: brassinosteroid homeostasis	1.63E-02
93	GO:0010305: leaf vascular tissue pattern formation	1.63E-02
94	GO:0040008: regulation of growth	1.80E-02
95	GO:0009749: response to glucose	1.81E-02
96	GO:0007165: signal transduction	1.89E-02
97	GO:0080156: mitochondrial mRNA modification	1.90E-02
98	GO:0002229: defense response to oomycetes	1.90E-02
99	GO:0030163: protein catabolic process	2.08E-02
100	GO:0009739: response to gibberellin	2.11E-02
101	GO:0007166: cell surface receptor signaling pathway	2.16E-02
102	GO:0006464: cellular protein modification process	2.18E-02
103	GO:0009828: plant-type cell wall loosening	2.18E-02
104	GO:0019760: glucosinolate metabolic process	2.18E-02
105	GO:0009416: response to light stimulus	2.55E-02
106	GO:0010029: regulation of seed germination	2.57E-02
107	GO:0016311: dephosphorylation	2.88E-02
108	GO:0048481: plant ovule development	2.98E-02
109	GO:0006351: transcription, DNA-templated	2.99E-02
110	GO:0010218: response to far red light	3.20E-02
111	GO:0006811: ion transport	3.20E-02
112	GO:0006355: regulation of transcription, DNA-templated	3.34E-02
113	GO:0080167: response to karrikin	3.62E-02
114	GO:0009926: auxin polar transport	4.23E-02
115	GO:0009744: response to sucrose	4.23E-02
116	GO:0051707: response to other organism	4.23E-02
117	GO:0009644: response to high light intensity	4.47E-02
118	GO:0006260: DNA replication	4.84E-02
119	GO:0009664: plant-type cell wall organization	4.96E-02
120	GO:0042538: hyperosmotic salinity response	4.96E-02
121	GO:0007275: multicellular organism development	4.99E-02

Rank	GO Term	Adjusted P value
1	GO:0004479: methionyl-tRNA formyltransferase activity	0.00E+00
2	GO:0004835: tubulin-tyrosine ligase activity	0.00E+00
3	GO:0004015: adenosylmethionine-8-amino-7-oxononanoate transaminase activity	0.00E+00
4	GO:0043399: tRNA A64-2'-O-ribosylphosphate transferase activity	0.00E+00
5	GO:0016763: transferase activity, transferring pentosyl groups	0.00E+00
6	GO:0004141: dethiobiotin synthase activity	0.00E+00
7	GO:0008395: steroid hydroxylase activity	1.93E-04
8	GO:0016901: oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor	1.93E-04
9	GO:0004016: adenylate cyclase activity	1.93E-04
10	GO:0042389: omega-3 fatty acid desaturase activity	4.33E-04
11	GO:0016742: hydroxymethyl-, formyl- and related transferase activity	7.06E-04
12	GO:0008864: formyltetrahydrofolate deformylase activity	7.06E-04
13	GO:0003999: adenine phosphoribosyltransferase activity	1.01E-03
14	GO:0008168: methyltransferase activity	1.02E-03
15	GO:0004930: G-protein coupled receptor activity	1.34E-03
16	GO:0010011: auxin binding	1.34E-03
17	GO:0010328: auxin influx transmembrane transporter activity	1.34E-03
18	GO:0008725: DNA-3-methyladenine glycosylase activity	1.70E-03
19	GO:0097027: ubiquitin-protein transferase activator activity	2.10E-03
20	GO:0003688: DNA replication origin binding	2.10E-03
21	GO:0004124: cysteine synthase activity	2.52E-03
22	GO:0010997: anaphase-promoting complex binding	2.52E-03
23	GO:0016832: aldehyde-lyase activity	2.52E-03
24	GO:0017056: structural constituent of nuclear pore	3.43E-03
25	GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	3.93E-03
26	GO:0003697: single-stranded DNA binding	4.40E-03
27	GO:0000989: transcription factor activity, transcription factor binding	4.44E-03
28	GO:0005487: nucleocytoplasmic transporter activity	4.99E-03
29	GO:0004713: protein tyrosine kinase activity	5.55E-03
30	GO:0015293: symporter activity	6.36E-03
31	GO:0052716: hydroquinone:oxygen oxidoreductase activity	6.73E-03
32	GO:0003725: double-stranded RNA binding	7.36E-03
33	GO:0015114: phosphate ion transmembrane transporter activity	7.36E-03
34	GO:0003700: transcription factor activity, sequence-specific DNA binding	7.53E-03
35	GO:0003690: double-stranded DNA binding	7.90E-03
36	GO:0015171: amino acid transmembrane transporter activity	8.45E-03
37	GO:0005217: intracellular ligand-gated ion channel activity	8.67E-03
38	GO:0004970: ionotropic glutamate receptor activity	8.67E-03
39	GO:0004190: aspartic-type endopeptidase activity	8.67E-03
40	GO:0003714: transcription corepressor activity	1.01E-02
41	GO:0016874: ligase activity	1.02E-02
42	GO:0003779: actin binding	1.06E-02
43	GO:0030570: pectate lyase activity	1.31E-02
44	GO:0003723: RNA binding	1.34E-02
45	GO:0003727: single-stranded RNA binding	1.39E-02
46	GO:0005102: receptor binding	1.47E-02
47	GO:0030170: pyridoxal phosphate binding	1.52E-02
48	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	1.55E-02
49	GO:0010181: FMN binding	1.72E-02
50	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.76E-02
51	GO:0019901: protein kinase binding	1.81E-02
52	GO:0048038: quinone binding	1.90E-02
53	GO:0005200: structural constituent of cytoskeleton	2.27E-02
54	GO:0016722: oxidoreductase activity, oxidizing metal ions	2.27E-02
55	GO:0003677: DNA binding	2.43E-02
56	GO:0004004: ATP-dependent RNA helicase activity	2.77E-02
57	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	2.88E-02
58	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	3.20E-02
59	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	3.31E-02
60	GO:0043565: sequence-specific DNA binding	3.43E-02
61	GO:0003993: acid phosphatase activity	3.64E-02
62	GO:0043621: protein self-association	4.47E-02
63	GO:0004871: signal transducer activity	4.53E-02