GO Enrichment Analysis of Co-expressed Genes with
AT3G22420
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042966: biotin carboxyl carrier protein biosynthetic process | 0.00E+00 |
| 2 | GO:0061157: mRNA destabilization | 0.00E+00 |
| 3 | GO:0090706: specification of plant organ position | 0.00E+00 |
| 4 | GO:2000121: regulation of removal of superoxide radicals | 0.00E+00 |
| 5 | GO:1902183: regulation of shoot apical meristem development | 2.41E-05 |
| 6 | GO:0010158: abaxial cell fate specification | 2.41E-05 |
| 7 | GO:0051247: positive regulation of protein metabolic process | 1.33E-04 |
| 8 | GO:2000905: negative regulation of starch metabolic process | 1.33E-04 |
| 9 | GO:0090610: bundle sheath cell fate specification | 1.33E-04 |
| 10 | GO:0010450: inflorescence meristem growth | 1.33E-04 |
| 11 | GO:0051171: regulation of nitrogen compound metabolic process | 1.33E-04 |
| 12 | GO:2000024: regulation of leaf development | 1.37E-04 |
| 13 | GO:0010115: regulation of abscisic acid biosynthetic process | 3.07E-04 |
| 14 | GO:1900871: chloroplast mRNA modification | 3.07E-04 |
| 15 | GO:0042753: positive regulation of circadian rhythm | 4.27E-04 |
| 16 | GO:0009944: polarity specification of adaxial/abaxial axis | 4.74E-04 |
| 17 | GO:0045165: cell fate commitment | 5.06E-04 |
| 18 | GO:0048586: regulation of long-day photoperiodism, flowering | 5.06E-04 |
| 19 | GO:0009585: red, far-red light phototransduction | 5.60E-04 |
| 20 | GO:0009067: aspartate family amino acid biosynthetic process | 7.24E-04 |
| 21 | GO:0006166: purine ribonucleoside salvage | 7.24E-04 |
| 22 | GO:0009963: positive regulation of flavonoid biosynthetic process | 7.24E-04 |
| 23 | GO:0009647: skotomorphogenesis | 7.24E-04 |
| 24 | GO:0010255: glucose mediated signaling pathway | 7.24E-04 |
| 25 | GO:0006168: adenine salvage | 7.24E-04 |
| 26 | GO:0010154: fruit development | 9.22E-04 |
| 27 | GO:2000306: positive regulation of photomorphogenesis | 9.59E-04 |
| 28 | GO:0009649: entrainment of circadian clock | 9.59E-04 |
| 29 | GO:0044209: AMP salvage | 1.21E-03 |
| 30 | GO:0034052: positive regulation of plant-type hypersensitive response | 1.21E-03 |
| 31 | GO:0006544: glycine metabolic process | 1.21E-03 |
| 32 | GO:0046283: anthocyanin-containing compound metabolic process | 1.21E-03 |
| 33 | GO:0045038: protein import into chloroplast thylakoid membrane | 1.21E-03 |
| 34 | GO:0006464: cellular protein modification process | 1.36E-03 |
| 35 | GO:0006561: proline biosynthetic process | 1.49E-03 |
| 36 | GO:0006563: L-serine metabolic process | 1.49E-03 |
| 37 | GO:0006751: glutathione catabolic process | 1.49E-03 |
| 38 | GO:0000741: karyogamy | 1.49E-03 |
| 39 | GO:1902456: regulation of stomatal opening | 1.49E-03 |
| 40 | GO:0009088: threonine biosynthetic process | 1.78E-03 |
| 41 | GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity | 1.78E-03 |
| 42 | GO:0009648: photoperiodism | 1.78E-03 |
| 43 | GO:0048280: vesicle fusion with Golgi apparatus | 1.78E-03 |
| 44 | GO:0010189: vitamin E biosynthetic process | 1.78E-03 |
| 45 | GO:0010196: nonphotochemical quenching | 2.09E-03 |
| 46 | GO:0048527: lateral root development | 2.41E-03 |
| 47 | GO:0043068: positive regulation of programmed cell death | 2.42E-03 |
| 48 | GO:0010078: maintenance of root meristem identity | 2.42E-03 |
| 49 | GO:0043562: cellular response to nitrogen levels | 2.77E-03 |
| 50 | GO:0010093: specification of floral organ identity | 2.77E-03 |
| 51 | GO:0006997: nucleus organization | 2.77E-03 |
| 52 | GO:0009416: response to light stimulus | 2.93E-03 |
| 53 | GO:0071577: zinc II ion transmembrane transport | 3.50E-03 |
| 54 | GO:0009638: phototropism | 3.50E-03 |
| 55 | GO:0010018: far-red light signaling pathway | 3.50E-03 |
| 56 | GO:1900865: chloroplast RNA modification | 3.50E-03 |
| 57 | GO:0010380: regulation of chlorophyll biosynthetic process | 3.50E-03 |
| 58 | GO:0009641: shade avoidance | 3.89E-03 |
| 59 | GO:0006896: Golgi to vacuole transport | 3.89E-03 |
| 60 | GO:0009688: abscisic acid biosynthetic process | 3.89E-03 |
| 61 | GO:0009684: indoleacetic acid biosynthetic process | 4.30E-03 |
| 62 | GO:0009089: lysine biosynthetic process via diaminopimelate | 4.30E-03 |
| 63 | GO:0009750: response to fructose | 4.30E-03 |
| 64 | GO:0009909: regulation of flower development | 5.05E-03 |
| 65 | GO:0010588: cotyledon vascular tissue pattern formation | 5.15E-03 |
| 66 | GO:0048367: shoot system development | 5.56E-03 |
| 67 | GO:0048467: gynoecium development | 5.60E-03 |
| 68 | GO:0006541: glutamine metabolic process | 5.60E-03 |
| 69 | GO:0009933: meristem structural organization | 5.60E-03 |
| 70 | GO:0009740: gibberellic acid mediated signaling pathway | 6.11E-03 |
| 71 | GO:0000162: tryptophan biosynthetic process | 6.53E-03 |
| 72 | GO:0000027: ribosomal large subunit assembly | 7.01E-03 |
| 73 | GO:0007010: cytoskeleton organization | 7.01E-03 |
| 74 | GO:0010187: negative regulation of seed germination | 7.01E-03 |
| 75 | GO:0048511: rhythmic process | 8.02E-03 |
| 76 | GO:0035428: hexose transmembrane transport | 8.55E-03 |
| 77 | GO:0009814: defense response, incompatible interaction | 8.55E-03 |
| 78 | GO:0071215: cellular response to abscisic acid stimulus | 9.08E-03 |
| 79 | GO:0042147: retrograde transport, endosome to Golgi | 1.02E-02 |
| 80 | GO:0010087: phloem or xylem histogenesis | 1.08E-02 |
| 81 | GO:0000271: polysaccharide biosynthetic process | 1.08E-02 |
| 82 | GO:0080022: primary root development | 1.08E-02 |
| 83 | GO:0007623: circadian rhythm | 1.12E-02 |
| 84 | GO:0010197: polar nucleus fusion | 1.13E-02 |
| 85 | GO:0010182: sugar mediated signaling pathway | 1.13E-02 |
| 86 | GO:0046323: glucose import | 1.13E-02 |
| 87 | GO:0009741: response to brassinosteroid | 1.13E-02 |
| 88 | GO:0045489: pectin biosynthetic process | 1.13E-02 |
| 89 | GO:0009958: positive gravitropism | 1.13E-02 |
| 90 | GO:0007018: microtubule-based movement | 1.19E-02 |
| 91 | GO:0008654: phospholipid biosynthetic process | 1.25E-02 |
| 92 | GO:0009851: auxin biosynthetic process | 1.25E-02 |
| 93 | GO:0006623: protein targeting to vacuole | 1.25E-02 |
| 94 | GO:0048825: cotyledon development | 1.25E-02 |
| 95 | GO:0048510: regulation of timing of transition from vegetative to reproductive phase | 1.32E-02 |
| 96 | GO:0006891: intra-Golgi vesicle-mediated transport | 1.32E-02 |
| 97 | GO:0010468: regulation of gene expression | 1.34E-02 |
| 98 | GO:0009639: response to red or far red light | 1.51E-02 |
| 99 | GO:0010029: regulation of seed germination | 1.78E-02 |
| 100 | GO:0006888: ER to Golgi vesicle-mediated transport | 1.92E-02 |
| 101 | GO:0048573: photoperiodism, flowering | 1.92E-02 |
| 102 | GO:0009723: response to ethylene | 2.02E-02 |
| 103 | GO:0048366: leaf development | 2.05E-02 |
| 104 | GO:0009910: negative regulation of flower development | 2.29E-02 |
| 105 | GO:0010119: regulation of stomatal movement | 2.29E-02 |
| 106 | GO:0009853: photorespiration | 2.44E-02 |
| 107 | GO:0016051: carbohydrate biosynthetic process | 2.44E-02 |
| 108 | GO:0006631: fatty acid metabolic process | 2.76E-02 |
| 109 | GO:0051707: response to other organism | 2.92E-02 |
| 110 | GO:0009640: photomorphogenesis | 2.92E-02 |
| 111 | GO:0009644: response to high light intensity | 3.09E-02 |
| 112 | GO:0016310: phosphorylation | 3.26E-02 |
| 113 | GO:0042538: hyperosmotic salinity response | 3.44E-02 |
| 114 | GO:0006812: cation transport | 3.44E-02 |
| 115 | GO:0010224: response to UV-B | 3.71E-02 |
| 116 | GO:0009626: plant-type hypersensitive response | 4.26E-02 |
| 117 | GO:0016567: protein ubiquitination | 4.44E-02 |
| 118 | GO:0051726: regulation of cell cycle | 4.84E-02 |
| 119 | GO:0009742: brassinosteroid mediated signaling pathway | 4.84E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1990534: thermospermine oxidase activity | 0.00E+00 |
| 2 | GO:0004078: biotin-[methylcrotonoyl-CoA-carboxylase] ligase activity | 0.00E+00 |
| 3 | GO:0010301: xanthoxin dehydrogenase activity | 0.00E+00 |
| 4 | GO:0004077: biotin-[acetyl-CoA-carboxylase] ligase activity | 0.00E+00 |
| 5 | GO:0010276: phytol kinase activity | 0.00E+00 |
| 6 | GO:0019210: kinase inhibitor activity | 1.33E-04 |
| 7 | GO:0017118: lipoyltransferase activity | 3.07E-04 |
| 8 | GO:0003839: gamma-glutamylcyclotransferase activity | 3.07E-04 |
| 9 | GO:0050362: L-tryptophan:2-oxoglutarate aminotransferase activity | 3.07E-04 |
| 10 | GO:0080097: L-tryptophan:pyruvate aminotransferase activity | 3.07E-04 |
| 11 | GO:0004049: anthranilate synthase activity | 5.06E-04 |
| 12 | GO:0004072: aspartate kinase activity | 7.24E-04 |
| 13 | GO:0003999: adenine phosphoribosyltransferase activity | 7.24E-04 |
| 14 | GO:0001085: RNA polymerase II transcription factor binding | 9.22E-04 |
| 15 | GO:0080032: methyl jasmonate esterase activity | 9.59E-04 |
| 16 | GO:0070696: transmembrane receptor protein serine/threonine kinase binding | 1.21E-03 |
| 17 | GO:0016846: carbon-sulfur lyase activity | 1.21E-03 |
| 18 | GO:0004372: glycine hydroxymethyltransferase activity | 1.21E-03 |
| 19 | GO:0004605: phosphatidate cytidylyltransferase activity | 1.49E-03 |
| 20 | GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 2.41E-03 |
| 21 | GO:0003700: transcription factor activity, sequence-specific DNA binding | 4.91E-03 |
| 22 | GO:0004022: alcohol dehydrogenase (NAD) activity | 5.15E-03 |
| 23 | GO:0008131: primary amine oxidase activity | 5.60E-03 |
| 24 | GO:0005385: zinc ion transmembrane transporter activity | 7.01E-03 |
| 25 | GO:0008324: cation transmembrane transporter activity | 7.51E-03 |
| 26 | GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity | 8.55E-03 |
| 27 | GO:0030570: pectate lyase activity | 9.08E-03 |
| 28 | GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding | 9.25E-03 |
| 29 | GO:0003727: single-stranded RNA binding | 9.63E-03 |
| 30 | GO:0008017: microtubule binding | 1.17E-02 |
| 31 | GO:0005355: glucose transmembrane transporter activity | 1.19E-02 |
| 32 | GO:0019901: protein kinase binding | 1.25E-02 |
| 33 | GO:0016491: oxidoreductase activity | 1.29E-02 |
| 34 | GO:0042802: identical protein binding | 1.43E-02 |
| 35 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 1.57E-02 |
| 36 | GO:0016597: amino acid binding | 1.64E-02 |
| 37 | GO:0016788: hydrolase activity, acting on ester bonds | 1.77E-02 |
| 38 | GO:0003682: chromatin binding | 1.84E-02 |
| 39 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 2.21E-02 |
| 40 | GO:0050897: cobalt ion binding | 2.29E-02 |
| 41 | GO:0000149: SNARE binding | 2.60E-02 |
| 42 | GO:0008270: zinc ion binding | 2.63E-02 |
| 43 | GO:0005484: SNAP receptor activity | 2.92E-02 |
| 44 | GO:0035091: phosphatidylinositol binding | 3.09E-02 |
| 45 | GO:0003824: catalytic activity | 3.62E-02 |
| 46 | GO:0003777: microtubule motor activity | 3.89E-02 |
| 47 | GO:0031625: ubiquitin protein ligase binding | 3.89E-02 |
| 48 | GO:0016874: ligase activity | 4.45E-02 |
| 49 | GO:0030599: pectinesterase activity | 4.45E-02 |
| 50 | GO:0004842: ubiquitin-protein transferase activity | 4.79E-02 |