GO Enrichment Analysis of Co-expressed Genes with
AT3G22210
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046471: phosphatidylglycerol metabolic process | 0.00E+00 |
| 2 | GO:0006982: response to lipid hydroperoxide | 0.00E+00 |
| 3 | GO:0002184: cytoplasmic translational termination | 0.00E+00 |
| 4 | GO:0010335: response to non-ionic osmotic stress | 0.00E+00 |
| 5 | GO:1901918: negative regulation of exoribonuclease activity | 0.00E+00 |
| 6 | GO:0015995: chlorophyll biosynthetic process | 1.97E-09 |
| 7 | GO:0015979: photosynthesis | 8.27E-09 |
| 8 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 9.53E-08 |
| 9 | GO:0009658: chloroplast organization | 4.47E-07 |
| 10 | GO:0071482: cellular response to light stimulus | 7.67E-06 |
| 11 | GO:0009773: photosynthetic electron transport in photosystem I | 2.44E-05 |
| 12 | GO:2001141: regulation of RNA biosynthetic process | 2.46E-05 |
| 13 | GO:0015994: chlorophyll metabolic process | 4.46E-05 |
| 14 | GO:0010207: photosystem II assembly | 4.63E-05 |
| 15 | GO:0006810: transport | 1.92E-04 |
| 16 | GO:0048564: photosystem I assembly | 2.38E-04 |
| 17 | GO:1902478: negative regulation of defense response to bacterium, incompatible interaction | 2.55E-04 |
| 18 | GO:1904966: positive regulation of vitamin E biosynthetic process | 2.55E-04 |
| 19 | GO:1904964: positive regulation of phytol biosynthetic process | 2.55E-04 |
| 20 | GO:0065002: intracellular protein transmembrane transport | 2.55E-04 |
| 21 | GO:0043087: regulation of GTPase activity | 2.55E-04 |
| 22 | GO:0071461: cellular response to redox state | 2.55E-04 |
| 23 | GO:0034337: RNA folding | 2.55E-04 |
| 24 | GO:0048363: mucilage pectin metabolic process | 2.55E-04 |
| 25 | GO:0043953: protein transport by the Tat complex | 2.55E-04 |
| 26 | GO:0010426: DNA methylation on cytosine within a CHH sequence | 2.55E-04 |
| 27 | GO:0019252: starch biosynthetic process | 2.61E-04 |
| 28 | GO:0032544: plastid translation | 2.94E-04 |
| 29 | GO:0055114: oxidation-reduction process | 4.65E-04 |
| 30 | GO:0010027: thylakoid membrane organization | 4.65E-04 |
| 31 | GO:0080005: photosystem stoichiometry adjustment | 5.64E-04 |
| 32 | GO:0071668: plant-type cell wall assembly | 5.64E-04 |
| 33 | GO:0080183: response to photooxidative stress | 5.64E-04 |
| 34 | GO:0006729: tetrahydrobiopterin biosynthetic process | 5.64E-04 |
| 35 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 5.64E-04 |
| 36 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 5.64E-04 |
| 37 | GO:0042819: vitamin B6 biosynthetic process | 5.64E-04 |
| 38 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 5.64E-04 |
| 39 | GO:0006352: DNA-templated transcription, initiation | 5.68E-04 |
| 40 | GO:0006094: gluconeogenesis | 7.37E-04 |
| 41 | GO:0034051: negative regulation of plant-type hypersensitive response | 9.15E-04 |
| 42 | GO:0044375: regulation of peroxisome size | 9.15E-04 |
| 43 | GO:0005977: glycogen metabolic process | 9.15E-04 |
| 44 | GO:0006000: fructose metabolic process | 9.15E-04 |
| 45 | GO:0006636: unsaturated fatty acid biosynthetic process | 1.03E-03 |
| 46 | GO:0042823: pyridoxal phosphate biosynthetic process | 1.31E-03 |
| 47 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 1.31E-03 |
| 48 | GO:0033014: tetrapyrrole biosynthetic process | 1.31E-03 |
| 49 | GO:0008615: pyridoxine biosynthetic process | 1.31E-03 |
| 50 | GO:0010731: protein glutathionylation | 1.31E-03 |
| 51 | GO:1901332: negative regulation of lateral root development | 1.31E-03 |
| 52 | GO:0009152: purine ribonucleotide biosynthetic process | 1.31E-03 |
| 53 | GO:0046653: tetrahydrofolate metabolic process | 1.31E-03 |
| 54 | GO:0042989: sequestering of actin monomers | 1.31E-03 |
| 55 | GO:0019748: secondary metabolic process | 1.50E-03 |
| 56 | GO:0010021: amylopectin biosynthetic process | 1.75E-03 |
| 57 | GO:0006536: glutamate metabolic process | 1.75E-03 |
| 58 | GO:0010600: regulation of auxin biosynthetic process | 1.75E-03 |
| 59 | GO:0042254: ribosome biogenesis | 2.03E-03 |
| 60 | GO:0030041: actin filament polymerization | 2.23E-03 |
| 61 | GO:0009107: lipoate biosynthetic process | 2.23E-03 |
| 62 | GO:0009735: response to cytokinin | 2.69E-03 |
| 63 | GO:0042549: photosystem II stabilization | 2.75E-03 |
| 64 | GO:0009920: cell plate formation involved in plant-type cell wall biogenesis | 2.75E-03 |
| 65 | GO:1901259: chloroplast rRNA processing | 3.30E-03 |
| 66 | GO:0010189: vitamin E biosynthetic process | 3.30E-03 |
| 67 | GO:0009854: oxidative photosynthetic carbon pathway | 3.30E-03 |
| 68 | GO:0010244: response to low fluence blue light stimulus by blue low-fluence system | 3.30E-03 |
| 69 | GO:1900057: positive regulation of leaf senescence | 3.89E-03 |
| 70 | GO:0009645: response to low light intensity stimulus | 3.89E-03 |
| 71 | GO:0051510: regulation of unidimensional cell growth | 3.89E-03 |
| 72 | GO:0010161: red light signaling pathway | 3.89E-03 |
| 73 | GO:0009704: de-etiolation | 4.52E-03 |
| 74 | GO:0016559: peroxisome fission | 4.52E-03 |
| 75 | GO:0010928: regulation of auxin mediated signaling pathway | 4.52E-03 |
| 76 | GO:0042255: ribosome assembly | 4.52E-03 |
| 77 | GO:0006353: DNA-templated transcription, termination | 4.52E-03 |
| 78 | GO:0018298: protein-chromophore linkage | 5.18E-03 |
| 79 | GO:0006002: fructose 6-phosphate metabolic process | 5.18E-03 |
| 80 | GO:0009817: defense response to fungus, incompatible interaction | 5.18E-03 |
| 81 | GO:0009657: plastid organization | 5.18E-03 |
| 82 | GO:0006783: heme biosynthetic process | 5.86E-03 |
| 83 | GO:0016051: carbohydrate biosynthetic process | 6.56E-03 |
| 84 | GO:0009853: photorespiration | 6.56E-03 |
| 85 | GO:0006779: porphyrin-containing compound biosynthetic process | 6.58E-03 |
| 86 | GO:0048354: mucilage biosynthetic process involved in seed coat development | 6.58E-03 |
| 87 | GO:0006535: cysteine biosynthetic process from serine | 7.33E-03 |
| 88 | GO:0043069: negative regulation of programmed cell death | 7.33E-03 |
| 89 | GO:0009636: response to toxic substance | 9.53E-03 |
| 90 | GO:0006807: nitrogen compound metabolic process | 9.75E-03 |
| 91 | GO:0018107: peptidyl-threonine phosphorylation | 9.75E-03 |
| 92 | GO:0009767: photosynthetic electron transport chain | 9.75E-03 |
| 93 | GO:0005986: sucrose biosynthetic process | 9.75E-03 |
| 94 | GO:0019253: reductive pentose-phosphate cycle | 1.06E-02 |
| 95 | GO:0009266: response to temperature stimulus | 1.06E-02 |
| 96 | GO:0042538: hyperosmotic salinity response | 1.06E-02 |
| 97 | GO:0034605: cellular response to heat | 1.06E-02 |
| 98 | GO:0090351: seedling development | 1.15E-02 |
| 99 | GO:0007031: peroxisome organization | 1.15E-02 |
| 100 | GO:0019344: cysteine biosynthetic process | 1.34E-02 |
| 101 | GO:0007010: cytoskeleton organization | 1.34E-02 |
| 102 | GO:0009768: photosynthesis, light harvesting in photosystem I | 1.43E-02 |
| 103 | GO:0061077: chaperone-mediated protein folding | 1.53E-02 |
| 104 | GO:0006306: DNA methylation | 1.53E-02 |
| 105 | GO:0016226: iron-sulfur cluster assembly | 1.64E-02 |
| 106 | GO:0030433: ubiquitin-dependent ERAD pathway | 1.64E-02 |
| 107 | GO:0010017: red or far-red light signaling pathway | 1.64E-02 |
| 108 | GO:0009306: protein secretion | 1.85E-02 |
| 109 | GO:0009561: megagametogenesis | 1.85E-02 |
| 110 | GO:0032259: methylation | 1.95E-02 |
| 111 | GO:0000271: polysaccharide biosynthetic process | 2.07E-02 |
| 112 | GO:0006606: protein import into nucleus | 2.07E-02 |
| 113 | GO:0042631: cellular response to water deprivation | 2.07E-02 |
| 114 | GO:0006520: cellular amino acid metabolic process | 2.18E-02 |
| 115 | GO:0045489: pectin biosynthetic process | 2.18E-02 |
| 116 | GO:0005975: carbohydrate metabolic process | 2.20E-02 |
| 117 | GO:0009845: seed germination | 2.22E-02 |
| 118 | GO:0009646: response to absence of light | 2.29E-02 |
| 119 | GO:0009791: post-embryonic development | 2.41E-02 |
| 120 | GO:0000302: response to reactive oxygen species | 2.53E-02 |
| 121 | GO:0006633: fatty acid biosynthetic process | 2.57E-02 |
| 122 | GO:0032502: developmental process | 2.65E-02 |
| 123 | GO:0007264: small GTPase mediated signal transduction | 2.65E-02 |
| 124 | GO:0009567: double fertilization forming a zygote and endosperm | 2.90E-02 |
| 125 | GO:0010286: heat acclimation | 3.03E-02 |
| 126 | GO:0006412: translation | 3.25E-02 |
| 127 | GO:0042128: nitrate assimilation | 3.56E-02 |
| 128 | GO:0010311: lateral root formation | 4.12E-02 |
| 129 | GO:0009407: toxin catabolic process | 4.26E-02 |
| 130 | GO:0048527: lateral root development | 4.41E-02 |
| 131 | GO:0007568: aging | 4.41E-02 |
| 132 | GO:0034599: cellular response to oxidative stress | 4.85E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0045550: geranylgeranyl reductase activity | 0.00E+00 |
| 2 | GO:0050278: sedoheptulose-bisphosphatase activity | 0.00E+00 |
| 3 | GO:0008465: glycerate dehydrogenase activity | 0.00E+00 |
| 4 | GO:0046408: chlorophyll synthetase activity | 0.00E+00 |
| 5 | GO:0008942: nitrite reductase [NAD(P)H] activity | 0.00E+00 |
| 6 | GO:0052637: delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase activity | 0.00E+00 |
| 7 | GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity | 0.00E+00 |
| 8 | GO:0046406: magnesium protoporphyrin IX methyltransferase activity | 0.00E+00 |
| 9 | GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity | 0.00E+00 |
| 10 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 2.78E-07 |
| 11 | GO:0016851: magnesium chelatase activity | 2.46E-05 |
| 12 | GO:0001053: plastid sigma factor activity | 4.46E-05 |
| 13 | GO:0016987: sigma factor activity | 4.46E-05 |
| 14 | GO:0019843: rRNA binding | 8.66E-05 |
| 15 | GO:0008124: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity | 2.55E-04 |
| 16 | GO:0016776: phosphotransferase activity, phosphate group as acceptor | 2.55E-04 |
| 17 | GO:0080132: fatty acid alpha-hydroxylase activity | 2.55E-04 |
| 18 | GO:0004325: ferrochelatase activity | 2.55E-04 |
| 19 | GO:0048038: quinone binding | 2.86E-04 |
| 20 | GO:0016491: oxidoreductase activity | 5.25E-04 |
| 21 | GO:0018708: thiol S-methyltransferase activity | 5.64E-04 |
| 22 | GO:0016630: protochlorophyllide reductase activity | 5.64E-04 |
| 23 | GO:0019156: isoamylase activity | 5.64E-04 |
| 24 | GO:0050017: L-3-cyanoalanine synthase activity | 5.64E-04 |
| 25 | GO:0047746: chlorophyllase activity | 5.64E-04 |
| 26 | GO:0042389: omega-3 fatty acid desaturase activity | 5.64E-04 |
| 27 | GO:0009977: proton motive force dependent protein transmembrane transporter activity | 5.64E-04 |
| 28 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 5.64E-04 |
| 29 | GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity | 5.64E-04 |
| 30 | GO:0036381: pyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity | 5.64E-04 |
| 31 | GO:0031072: heat shock protein binding | 7.37E-04 |
| 32 | GO:0004751: ribose-5-phosphate isomerase activity | 9.15E-04 |
| 33 | GO:0030267: glyoxylate reductase (NADP) activity | 9.15E-04 |
| 34 | GO:0016742: hydroxymethyl-, formyl- and related transferase activity | 9.15E-04 |
| 35 | GO:0008864: formyltetrahydrofolate deformylase activity | 9.15E-04 |
| 36 | GO:0016992: lipoate synthase activity | 9.15E-04 |
| 37 | GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | 1.31E-03 |
| 38 | GO:0043023: ribosomal large subunit binding | 1.31E-03 |
| 39 | GO:0004351: glutamate decarboxylase activity | 1.31E-03 |
| 40 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.46E-03 |
| 41 | GO:0009011: starch synthase activity | 1.75E-03 |
| 42 | GO:0043495: protein anchor | 1.75E-03 |
| 43 | GO:0003727: single-stranded RNA binding | 1.77E-03 |
| 44 | GO:0003785: actin monomer binding | 2.23E-03 |
| 45 | GO:0003959: NADPH dehydrogenase activity | 2.23E-03 |
| 46 | GO:0042578: phosphoric ester hydrolase activity | 2.75E-03 |
| 47 | GO:0004556: alpha-amylase activity | 2.75E-03 |
| 48 | GO:0004332: fructose-bisphosphate aldolase activity | 2.75E-03 |
| 49 | GO:0004130: cytochrome-c peroxidase activity | 2.75E-03 |
| 50 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 3.30E-03 |
| 51 | GO:0004124: cysteine synthase activity | 3.30E-03 |
| 52 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 3.30E-03 |
| 53 | GO:0003886: DNA (cytosine-5-)-methyltransferase activity | 3.30E-03 |
| 54 | GO:0019899: enzyme binding | 3.89E-03 |
| 55 | GO:0016168: chlorophyll binding | 4.20E-03 |
| 56 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 5.18E-03 |
| 57 | GO:0008135: translation factor activity, RNA binding | 5.18E-03 |
| 58 | GO:0009055: electron carrier activity | 5.53E-03 |
| 59 | GO:0071949: FAD binding | 5.86E-03 |
| 60 | GO:0003746: translation elongation factor activity | 6.56E-03 |
| 61 | GO:0042802: identical protein binding | 7.45E-03 |
| 62 | GO:0004364: glutathione transferase activity | 8.13E-03 |
| 63 | GO:0004185: serine-type carboxypeptidase activity | 8.47E-03 |
| 64 | GO:0051537: 2 iron, 2 sulfur cluster binding | 9.16E-03 |
| 65 | GO:0005509: calcium ion binding | 9.36E-03 |
| 66 | GO:0004565: beta-galactosidase activity | 9.75E-03 |
| 67 | GO:0008266: poly(U) RNA binding | 1.06E-02 |
| 68 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 1.14E-02 |
| 69 | GO:0003690: double-stranded DNA binding | 1.18E-02 |
| 70 | GO:0031409: pigment binding | 1.24E-02 |
| 71 | GO:0003735: structural constituent of ribosome | 1.25E-02 |
| 72 | GO:0051536: iron-sulfur cluster binding | 1.34E-02 |
| 73 | GO:0005528: FK506 binding | 1.34E-02 |
| 74 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 1.40E-02 |
| 75 | GO:0016787: hydrolase activity | 1.44E-02 |
| 76 | GO:0051082: unfolded protein binding | 1.63E-02 |
| 77 | GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity | 1.64E-02 |
| 78 | GO:0022891: substrate-specific transmembrane transporter activity | 1.74E-02 |
| 79 | GO:0030170: pyridoxal phosphate binding | 2.27E-02 |
| 80 | GO:0008565: protein transporter activity | 2.45E-02 |
| 81 | GO:0005525: GTP binding | 2.50E-02 |
| 82 | GO:0016887: ATPase activity | 3.56E-02 |
| 83 | GO:0004721: phosphoprotein phosphatase activity | 3.70E-02 |
| 84 | GO:0005096: GTPase activator activity | 4.12E-02 |
| 85 | GO:0008168: methyltransferase activity | 4.20E-02 |
| 86 | GO:0004222: metalloendopeptidase activity | 4.26E-02 |
| 87 | GO:0046982: protein heterodimerization activity | 4.28E-02 |
| 88 | GO:0004601: peroxidase activity | 4.36E-02 |
| 89 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 4.41E-02 |
| 90 | GO:0005515: protein binding | 4.49E-02 |