GO Enrichment Analysis of Co-expressed Genes with
AT3G21200
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1901333: positive regulation of lateral root development | 0.00E+00 |
| 2 | GO:0046719: regulation by virus of viral protein levels in host cell | 0.00E+00 |
| 3 | GO:0033473: indoleacetic acid conjugate metabolic process | 0.00E+00 |
| 4 | GO:0042793: transcription from plastid promoter | 6.25E-06 |
| 5 | GO:0010027: thylakoid membrane organization | 1.52E-05 |
| 6 | GO:0010376: stomatal complex formation | 4.60E-05 |
| 7 | GO:0010480: microsporocyte differentiation | 4.60E-05 |
| 8 | GO:0050891: multicellular organismal water homeostasis | 4.60E-05 |
| 9 | GO:1903866: palisade mesophyll development | 4.60E-05 |
| 10 | GO:0009926: auxin polar transport | 5.14E-05 |
| 11 | GO:0009629: response to gravity | 1.13E-04 |
| 12 | GO:0071497: cellular response to freezing | 1.13E-04 |
| 13 | GO:0099402: plant organ development | 1.13E-04 |
| 14 | GO:0006597: spermine biosynthetic process | 1.13E-04 |
| 15 | GO:0061087: positive regulation of histone H3-K27 methylation | 1.13E-04 |
| 16 | GO:0010569: regulation of double-strand break repair via homologous recombination | 1.13E-04 |
| 17 | GO:0010235: guard mother cell cytokinesis | 1.13E-04 |
| 18 | GO:0006306: DNA methylation | 1.36E-04 |
| 19 | GO:1902806: regulation of cell cycle G1/S phase transition | 1.95E-04 |
| 20 | GO:0090391: granum assembly | 1.95E-04 |
| 21 | GO:0090436: leaf pavement cell development | 1.95E-04 |
| 22 | GO:0006557: S-adenosylmethioninamine biosynthetic process | 1.95E-04 |
| 23 | GO:0009734: auxin-activated signaling pathway | 2.29E-04 |
| 24 | GO:0009800: cinnamic acid biosynthetic process | 2.85E-04 |
| 25 | GO:1901332: negative regulation of lateral root development | 2.85E-04 |
| 26 | GO:0031047: gene silencing by RNA | 3.07E-04 |
| 27 | GO:1901002: positive regulation of response to salt stress | 3.84E-04 |
| 28 | GO:0046656: folic acid biosynthetic process | 3.84E-04 |
| 29 | GO:0006346: methylation-dependent chromatin silencing | 3.84E-04 |
| 30 | GO:1901141: regulation of lignin biosynthetic process | 3.84E-04 |
| 31 | GO:1902584: positive regulation of response to water deprivation | 3.84E-04 |
| 32 | GO:0008295: spermidine biosynthetic process | 3.84E-04 |
| 33 | GO:0006544: glycine metabolic process | 4.88E-04 |
| 34 | GO:0006563: L-serine metabolic process | 5.98E-04 |
| 35 | GO:0006559: L-phenylalanine catabolic process | 5.98E-04 |
| 36 | GO:0046654: tetrahydrofolate biosynthetic process | 7.13E-04 |
| 37 | GO:0009554: megasporogenesis | 7.13E-04 |
| 38 | GO:2000037: regulation of stomatal complex patterning | 7.13E-04 |
| 39 | GO:0010444: guard mother cell differentiation | 8.33E-04 |
| 40 | GO:0009610: response to symbiotic fungus | 8.33E-04 |
| 41 | GO:0048437: floral organ development | 8.33E-04 |
| 42 | GO:0009396: folic acid-containing compound biosynthetic process | 8.33E-04 |
| 43 | GO:0032875: regulation of DNA endoreduplication | 9.57E-04 |
| 44 | GO:0000105: histidine biosynthetic process | 9.57E-04 |
| 45 | GO:0046620: regulation of organ growth | 9.57E-04 |
| 46 | GO:0010052: guard cell differentiation | 1.09E-03 |
| 47 | GO:0009733: response to auxin | 1.16E-03 |
| 48 | GO:0042761: very long-chain fatty acid biosynthetic process | 1.36E-03 |
| 49 | GO:0035999: tetrahydrofolate interconversion | 1.36E-03 |
| 50 | GO:0048229: gametophyte development | 1.66E-03 |
| 51 | GO:0010105: negative regulation of ethylene-activated signaling pathway | 1.81E-03 |
| 52 | GO:0010075: regulation of meristem growth | 1.98E-03 |
| 53 | GO:0010540: basipetal auxin transport | 2.14E-03 |
| 54 | GO:0009934: regulation of meristem structural organization | 2.14E-03 |
| 55 | GO:0090351: seedling development | 2.31E-03 |
| 56 | GO:0006071: glycerol metabolic process | 2.49E-03 |
| 57 | GO:0009306: protein secretion | 3.63E-03 |
| 58 | GO:0080022: primary root development | 4.04E-03 |
| 59 | GO:0048653: anther development | 4.04E-03 |
| 60 | GO:0009658: chloroplast organization | 4.21E-03 |
| 61 | GO:0006342: chromatin silencing | 4.25E-03 |
| 62 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 5.39E-03 |
| 63 | GO:0010252: auxin homeostasis | 5.60E-03 |
| 64 | GO:0030154: cell differentiation | 5.93E-03 |
| 65 | GO:0001666: response to hypoxia | 6.32E-03 |
| 66 | GO:0006629: lipid metabolic process | 7.68E-03 |
| 67 | GO:0048767: root hair elongation | 7.87E-03 |
| 68 | GO:0010311: lateral root formation | 7.87E-03 |
| 69 | GO:0009631: cold acclimation | 8.41E-03 |
| 70 | GO:0030001: metal ion transport | 9.82E-03 |
| 71 | GO:0006357: regulation of transcription from RNA polymerase II promoter | 1.02E-02 |
| 72 | GO:0009416: response to light stimulus | 1.37E-02 |
| 73 | GO:0048367: shoot system development | 1.52E-02 |
| 74 | GO:0009626: plant-type hypersensitive response | 1.56E-02 |
| 75 | GO:0009553: embryo sac development | 1.66E-02 |
| 76 | GO:0006396: RNA processing | 1.73E-02 |
| 77 | GO:0009451: RNA modification | 2.54E-02 |
| 78 | GO:0009739: response to gibberellin | 2.71E-02 |
| 79 | GO:0007166: cell surface receptor signaling pathway | 2.75E-02 |
| 80 | GO:0008380: RNA splicing | 2.84E-02 |
| 81 | GO:0009617: response to bacterium | 2.84E-02 |
| 82 | GO:0010468: regulation of gene expression | 2.84E-02 |
| 83 | GO:0009723: response to ethylene | 3.79E-02 |
| 84 | GO:0046777: protein autophosphorylation | 4.18E-02 |
| 85 | GO:0045892: negative regulation of transcription, DNA-templated | 4.57E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004400: histidinol-phosphate transaminase activity | 4.60E-05 |
| 2 | GO:0004156: dihydropteroate synthase activity | 4.60E-05 |
| 3 | GO:0003848: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity | 4.60E-05 |
| 4 | GO:0004014: adenosylmethionine decarboxylase activity | 1.95E-04 |
| 5 | GO:0017150: tRNA dihydrouridine synthase activity | 1.95E-04 |
| 6 | GO:0045548: phenylalanine ammonia-lyase activity | 1.95E-04 |
| 7 | GO:0004372: glycine hydroxymethyltransferase activity | 4.88E-04 |
| 8 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 4.88E-04 |
| 9 | GO:0080030: methyl indole-3-acetate esterase activity | 5.98E-04 |
| 10 | GO:0008173: RNA methyltransferase activity | 1.09E-03 |
| 11 | GO:0008889: glycerophosphodiester phosphodiesterase activity | 1.22E-03 |
| 12 | GO:0009672: auxin:proton symporter activity | 1.36E-03 |
| 13 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 1.66E-03 |
| 14 | GO:0005515: protein binding | 1.97E-03 |
| 15 | GO:0004022: alcohol dehydrogenase (NAD) activity | 1.98E-03 |
| 16 | GO:0010329: auxin efflux transmembrane transporter activity | 1.98E-03 |
| 17 | GO:0005345: purine nucleobase transmembrane transporter activity | 2.85E-03 |
| 18 | GO:0033612: receptor serine/threonine kinase binding | 3.04E-03 |
| 19 | GO:0004707: MAP kinase activity | 3.04E-03 |
| 20 | GO:0003727: single-stranded RNA binding | 3.63E-03 |
| 21 | GO:0005199: structural constituent of cell wall | 4.25E-03 |
| 22 | GO:0001085: RNA polymerase II transcription factor binding | 4.25E-03 |
| 23 | GO:0016788: hydrolase activity, acting on ester bonds | 4.29E-03 |
| 24 | GO:0003682: chromatin binding | 4.45E-03 |
| 25 | GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting | 6.23E-03 |
| 26 | GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding | 6.93E-03 |
| 27 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 7.60E-03 |
| 28 | GO:0016301: kinase activity | 7.70E-03 |
| 29 | GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 8.41E-03 |
| 30 | GO:0042393: histone binding | 9.82E-03 |
| 31 | GO:0043621: protein self-association | 1.13E-02 |
| 32 | GO:0016298: lipase activity | 1.35E-02 |
| 33 | GO:0019843: rRNA binding | 1.99E-02 |
| 34 | GO:0005516: calmodulin binding | 2.06E-02 |
| 35 | GO:0030170: pyridoxal phosphate binding | 2.14E-02 |
| 36 | GO:0003723: RNA binding | 2.17E-02 |
| 37 | GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding | 2.18E-02 |
| 38 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 2.38E-02 |
| 39 | GO:0044212: transcription regulatory region DNA binding | 2.77E-02 |
| 40 | GO:0005215: transporter activity | 3.07E-02 |
| 41 | GO:0046982: protein heterodimerization activity | 3.37E-02 |
| 42 | GO:0050660: flavin adenine dinucleotide binding | 3.79E-02 |
| 43 | GO:0004674: protein serine/threonine kinase activity | 3.97E-02 |
| 44 | GO:0004672: protein kinase activity | 4.06E-02 |
| 45 | GO:0003729: mRNA binding | 4.12E-02 |
| 46 | GO:0052689: carboxylic ester hydrolase activity | 4.27E-02 |
| 47 | GO:0004871: signal transducer activity | 4.68E-02 |