Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G21190

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:2000469: negative regulation of peroxidase activity0.00E+00
2GO:0033494: ferulate metabolic process0.00E+00
3GO:2000121: regulation of removal of superoxide radicals0.00E+00
4GO:2000042: negative regulation of double-strand break repair via homologous recombination0.00E+00
5GO:0090697: post-embryonic plant organ morphogenesis0.00E+00
6GO:0007155: cell adhesion3.84E-06
7GO:0016559: peroxisome fission1.97E-04
8GO:1902334: fructose export from vacuole to cytoplasm2.25E-04
9GO:0010362: negative regulation of anion channel activity by blue light2.25E-04
10GO:0015969: guanosine tetraphosphate metabolic process2.25E-04
11GO:0010426: DNA methylation on cytosine within a CHH sequence2.25E-04
12GO:0031426: polycistronic mRNA processing2.25E-04
13GO:0046167: glycerol-3-phosphate biosynthetic process2.25E-04
14GO:0043007: maintenance of rDNA2.25E-04
15GO:1902458: positive regulation of stomatal opening2.25E-04
16GO:0009641: shade avoidance4.12E-04
17GO:0009750: response to fructose4.76E-04
18GO:0010155: regulation of proton transport5.00E-04
19GO:1903426: regulation of reactive oxygen species biosynthetic process5.00E-04
20GO:0006650: glycerophospholipid metabolic process5.00E-04
21GO:0010541: acropetal auxin transport5.00E-04
22GO:0010143: cutin biosynthetic process6.96E-04
23GO:0046168: glycerol-3-phosphate catabolic process8.13E-04
24GO:0010160: formation of animal organ boundary8.13E-04
25GO:0044375: regulation of peroxisome size8.13E-04
26GO:0046621: negative regulation of organ growth8.13E-04
27GO:0006166: purine ribonucleoside salvage1.16E-03
28GO:0010239: chloroplast mRNA processing1.16E-03
29GO:0043481: anthocyanin accumulation in tissues in response to UV light1.16E-03
30GO:0006072: glycerol-3-phosphate metabolic process1.16E-03
31GO:0009963: positive regulation of flavonoid biosynthetic process1.16E-03
32GO:1990019: protein storage vacuole organization1.16E-03
33GO:0009647: skotomorphogenesis1.16E-03
34GO:0006168: adenine salvage1.16E-03
35GO:0048443: stamen development1.48E-03
36GO:0019722: calcium-mediated signaling1.48E-03
37GO:0048442: sepal development1.54E-03
38GO:0009649: entrainment of circadian clock1.54E-03
39GO:0008295: spermidine biosynthetic process1.54E-03
40GO:0032366: intracellular sterol transport1.54E-03
41GO:0006021: inositol biosynthetic process1.54E-03
42GO:0045489: pectin biosynthetic process1.87E-03
43GO:1902183: regulation of shoot apical meristem development1.97E-03
44GO:0044209: AMP salvage1.97E-03
45GO:0010158: abaxial cell fate specification1.97E-03
46GO:0006465: signal peptide processing1.97E-03
47GO:0034052: positive regulation of plant-type hypersensitive response1.97E-03
48GO:0046283: anthocyanin-containing compound metabolic process1.97E-03
49GO:0009904: chloroplast accumulation movement1.97E-03
50GO:0045038: protein import into chloroplast thylakoid membrane1.97E-03
51GO:0007018: microtubule-based movement2.00E-03
52GO:0009749: response to glucose2.15E-03
53GO:0046855: inositol phosphate dephosphorylation2.43E-03
54GO:0060918: auxin transport2.43E-03
55GO:0009648: photoperiodism2.91E-03
56GO:0010076: maintenance of floral meristem identity2.91E-03
57GO:0048280: vesicle fusion with Golgi apparatus2.91E-03
58GO:0009903: chloroplast avoidance movement2.91E-03
59GO:0009088: threonine biosynthetic process2.91E-03
60GO:0007267: cell-cell signaling2.95E-03
61GO:0048437: floral organ development3.43E-03
62GO:0000122: negative regulation of transcription from RNA polymerase II promoter3.43E-03
63GO:0030307: positive regulation of cell growth3.43E-03
64GO:0042255: ribosome assembly3.98E-03
65GO:0006353: DNA-templated transcription, termination3.98E-03
66GO:0043068: positive regulation of programmed cell death3.98E-03
67GO:2000070: regulation of response to water deprivation3.98E-03
68GO:0009932: cell tip growth4.56E-03
69GO:0015996: chlorophyll catabolic process4.56E-03
70GO:0007186: G-protein coupled receptor signaling pathway4.56E-03
71GO:0006811: ion transport4.75E-03
72GO:0048527: lateral root development4.98E-03
73GO:0010119: regulation of stomatal movement4.98E-03
74GO:0048507: meristem development5.16E-03
75GO:0009821: alkaloid biosynthetic process5.16E-03
76GO:0051865: protein autoubiquitination5.16E-03
77GO:0090305: nucleic acid phosphodiester bond hydrolysis5.16E-03
78GO:2000024: regulation of leaf development5.16E-03
79GO:0009637: response to blue light5.46E-03
80GO:0009638: phototropism5.79E-03
81GO:0048354: mucilage biosynthetic process involved in seed coat development5.79E-03
82GO:0010215: cellulose microfibril organization6.45E-03
83GO:0010192: mucilage biosynthetic process6.45E-03
84GO:0006896: Golgi to vacuole transport6.45E-03
85GO:0006995: cellular response to nitrogen starvation6.45E-03
86GO:0048441: petal development6.45E-03
87GO:0009640: photomorphogenesis7.04E-03
88GO:0009744: response to sucrose7.04E-03
89GO:0042546: cell wall biogenesis7.32E-03
90GO:0008361: regulation of cell size7.84E-03
91GO:0006790: sulfur compound metabolic process7.84E-03
92GO:0016024: CDP-diacylglycerol biosynthetic process7.84E-03
93GO:0045037: protein import into chloroplast stroma7.84E-03
94GO:0009767: photosynthetic electron transport chain8.57E-03
95GO:0009785: blue light signaling pathway8.57E-03
96GO:0030048: actin filament-based movement8.57E-03
97GO:0009718: anthocyanin-containing compound biosynthetic process8.57E-03
98GO:0010540: basipetal auxin transport9.33E-03
99GO:0034605: cellular response to heat9.33E-03
100GO:0048440: carpel development9.33E-03
101GO:0010020: chloroplast fission9.33E-03
102GO:0010207: photosystem II assembly9.33E-03
103GO:0010223: secondary shoot formation9.33E-03
104GO:0009887: animal organ morphogenesis9.33E-03
105GO:0007031: peroxisome organization1.01E-02
106GO:0042343: indole glucosinolate metabolic process1.01E-02
107GO:0009825: multidimensional cell growth1.01E-02
108GO:0019853: L-ascorbic acid biosynthetic process1.01E-02
109GO:0046854: phosphatidylinositol phosphorylation1.01E-02
110GO:0006857: oligopeptide transport1.02E-02
111GO:0042753: positive regulation of circadian rhythm1.09E-02
112GO:0009944: polarity specification of adaxial/abaxial axis1.17E-02
113GO:0007017: microtubule-based process1.26E-02
114GO:0048511: rhythmic process1.34E-02
115GO:0098542: defense response to other organism1.34E-02
116GO:0019915: lipid storage1.34E-02
117GO:0006306: DNA methylation1.34E-02
118GO:0051260: protein homooligomerization1.34E-02
119GO:0009814: defense response, incompatible interaction1.43E-02
120GO:0019748: secondary metabolic process1.43E-02
121GO:0009294: DNA mediated transformation1.53E-02
122GO:0071369: cellular response to ethylene stimulus1.53E-02
123GO:0006817: phosphate ion transport1.62E-02
124GO:0006281: DNA repair1.63E-02
125GO:0042147: retrograde transport, endosome to Golgi1.71E-02
126GO:0010154: fruit development1.91E-02
127GO:0009958: positive gravitropism1.91E-02
128GO:0006520: cellular amino acid metabolic process1.91E-02
129GO:0010182: sugar mediated signaling pathway1.91E-02
130GO:0009646: response to absence of light2.01E-02
131GO:0006623: protein targeting to vacuole2.11E-02
132GO:0009791: post-embryonic development2.11E-02
133GO:0008654: phospholipid biosynthetic process2.11E-02
134GO:0006891: intra-Golgi vesicle-mediated transport2.22E-02
135GO:0032502: developmental process2.32E-02
136GO:0007264: small GTPase mediated signal transduction2.32E-02
137GO:0010583: response to cyclopentenone2.32E-02
138GO:0007623: circadian rhythm2.35E-02
139GO:0010252: auxin homeostasis2.54E-02
140GO:0009639: response to red or far red light2.54E-02
141GO:0071555: cell wall organization2.58E-02
142GO:0010027: thylakoid membrane organization2.88E-02
143GO:0015995: chlorophyll biosynthetic process3.24E-02
144GO:0006888: ER to Golgi vesicle-mediated transport3.24E-02
145GO:0010411: xyloglucan metabolic process3.24E-02
146GO:0048573: photoperiodism, flowering3.24E-02
147GO:0009416: response to light stimulus3.35E-02
148GO:0016311: dephosphorylation3.36E-02
149GO:0030244: cellulose biosynthetic process3.48E-02
150GO:0018298: protein-chromophore linkage3.48E-02
151GO:0000160: phosphorelay signal transduction system3.61E-02
152GO:0009407: toxin catabolic process3.73E-02
153GO:0010218: response to far red light3.73E-02
154GO:0007568: aging3.86E-02
155GO:0016051: carbohydrate biosynthetic process4.12E-02
156GO:0006631: fatty acid metabolic process4.66E-02
157GO:0046777: protein autophosphorylation4.80E-02
158GO:0044550: secondary metabolite biosynthetic process4.87E-02
159GO:0009926: auxin polar transport4.93E-02
RankGO TermAdjusted P value
1GO:0004740: pyruvate dehydrogenase (acetyl-transferring) kinase activity0.00E+00
2GO:0009673: low-affinity phosphate transmembrane transporter activity0.00E+00
3GO:0036361: racemase activity, acting on amino acids and derivatives0.00E+00
4GO:0016855: racemase and epimerase activity, acting on amino acids and derivatives0.00E+00
5GO:0000293: ferric-chelate reductase activity8.46E-05
6GO:0047259: glucomannan 4-beta-mannosyltransferase activity2.25E-04
7GO:0004795: threonine synthase activity2.25E-04
8GO:0004328: formamidase activity2.25E-04
9GO:0010347: L-galactose-1-phosphate phosphatase activity2.25E-04
10GO:0004766: spermidine synthase activity5.00E-04
11GO:0052832: inositol monophosphate 3-phosphatase activity5.00E-04
12GO:0034432: bis(5'-adenosyl)-pentaphosphatase activity5.00E-04
13GO:0008934: inositol monophosphate 1-phosphatase activity5.00E-04
14GO:0052833: inositol monophosphate 4-phosphatase activity5.00E-04
15GO:0048531: beta-1,3-galactosyltransferase activity5.00E-04
16GO:0004081: bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity5.00E-04
17GO:0005353: fructose transmembrane transporter activity5.00E-04
18GO:0008728: GTP diphosphokinase activity5.00E-04
19GO:0080045: quercetin 3'-O-glucosyltransferase activity5.00E-04
20GO:0050734: hydroxycinnamoyltransferase activity8.13E-04
21GO:0003913: DNA photolyase activity8.13E-04
22GO:0047334: diphosphate-fructose-6-phosphate 1-phosphotransferase activity8.13E-04
23GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity8.13E-04
24GO:0008017: microtubule binding8.32E-04
25GO:0042802: identical protein binding1.11E-03
26GO:0048027: mRNA 5'-UTR binding1.16E-03
27GO:0003999: adenine phosphoribosyltransferase activity1.16E-03
28GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides1.16E-03
29GO:0009882: blue light photoreceptor activity1.16E-03
30GO:0003777: microtubule motor activity1.58E-03
31GO:0080046: quercetin 4'-O-glucosyltransferase activity2.43E-03
32GO:0035673: oligopeptide transmembrane transporter activity2.43E-03
33GO:0004366: glycerol-3-phosphate O-acyltransferase activity2.43E-03
34GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity2.43E-03
35GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity2.91E-03
36GO:0003886: DNA (cytosine-5-)-methyltransferase activity2.91E-03
37GO:0009927: histidine phosphotransfer kinase activity2.91E-03
38GO:0051753: mannan synthase activity2.91E-03
39GO:0016722: oxidoreductase activity, oxidizing metal ions2.95E-03
40GO:0003872: 6-phosphofructokinase activity3.43E-03
41GO:0047196: long-chain-alcohol O-fatty-acyltransferase activity4.56E-03
42GO:0103095: wax ester synthase activity4.56E-03
43GO:0016844: strictosidine synthase activity5.79E-03
44GO:0008515: sucrose transmembrane transporter activity7.13E-03
45GO:0000976: transcription regulatory region sequence-specific DNA binding7.84E-03
46GO:0015198: oligopeptide transporter activity7.84E-03
47GO:0004565: beta-galactosidase activity8.57E-03
48GO:0010329: auxin efflux transmembrane transporter activity8.57E-03
49GO:0008081: phosphoric diester hydrolase activity8.57E-03
50GO:0005315: inorganic phosphate transmembrane transporter activity8.57E-03
51GO:0000155: phosphorelay sensor kinase activity8.57E-03
52GO:0003774: motor activity9.33E-03
53GO:0031624: ubiquitin conjugating enzyme binding9.33E-03
54GO:0008146: sulfotransferase activity1.01E-02
55GO:0051119: sugar transmembrane transporter activity1.01E-02
56GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups1.16E-02
57GO:0004871: signal transducer activity1.33E-02
58GO:0016746: transferase activity, transferring acyl groups1.40E-02
59GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity1.43E-02
60GO:0030570: pectate lyase activity1.53E-02
61GO:0003727: single-stranded RNA binding1.62E-02
62GO:0010181: FMN binding2.01E-02
63GO:0005355: glucose transmembrane transporter activity2.01E-02
64GO:0016762: xyloglucan:xyloglucosyl transferase activity2.22E-02
65GO:0004518: nuclease activity2.32E-02
66GO:0016757: transferase activity, transferring glycosyl groups2.42E-02
67GO:0016791: phosphatase activity2.54E-02
68GO:0016798: hydrolase activity, acting on glycosyl bonds3.24E-02
69GO:0016491: oxidoreductase activity3.85E-02
70GO:0003993: acid phosphatase activity4.25E-02
71GO:0000149: SNARE binding4.39E-02
72GO:0004364: glutathione transferase activity4.79E-02
73GO:0004185: serine-type carboxypeptidase activity4.93E-02
74GO:0005484: SNAP receptor activity4.93E-02
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Gene type



Gene DE type