GO Enrichment Analysis of Co-expressed Genes with
AT3G20540
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0031081: nuclear pore distribution | 0.00E+00 |
| 2 | GO:0000972: transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery | 1.87E-05 |
| 3 | GO:0006390: transcription from mitochondrial promoter | 1.87E-05 |
| 4 | GO:0000002: mitochondrial genome maintenance | 4.85E-05 |
| 5 | GO:0080117: secondary growth | 8.61E-05 |
| 6 | GO:0009432: SOS response | 8.61E-05 |
| 7 | GO:0055069: zinc ion homeostasis | 1.30E-04 |
| 8 | GO:0000730: DNA recombinase assembly | 1.30E-04 |
| 9 | GO:0006405: RNA export from nucleus | 2.30E-04 |
| 10 | GO:0042148: strand invasion | 4.02E-04 |
| 11 | GO:0010098: suspensor development | 4.02E-04 |
| 12 | GO:0006400: tRNA modification | 4.02E-04 |
| 13 | GO:0042255: ribosome assembly | 4.64E-04 |
| 14 | GO:0010212: response to ionizing radiation | 5.27E-04 |
| 15 | GO:0006259: DNA metabolic process | 7.30E-04 |
| 16 | GO:0006325: chromatin organization | 7.30E-04 |
| 17 | GO:0006298: mismatch repair | 7.30E-04 |
| 18 | GO:0006265: DNA topological change | 8.02E-04 |
| 19 | GO:0006312: mitotic recombination | 8.75E-04 |
| 20 | GO:0009691: cytokinin biosynthetic process | 9.49E-04 |
| 21 | GO:0030150: protein import into mitochondrial matrix | 1.26E-03 |
| 22 | GO:0009658: chloroplast organization | 1.39E-03 |
| 23 | GO:0008033: tRNA processing | 1.89E-03 |
| 24 | GO:0010501: RNA secondary structure unwinding | 1.89E-03 |
| 25 | GO:0006606: protein import into nucleus | 1.89E-03 |
| 26 | GO:0007059: chromosome segregation | 2.09E-03 |
| 27 | GO:0032502: developmental process | 2.40E-03 |
| 28 | GO:0006310: DNA recombination | 2.61E-03 |
| 29 | GO:0009627: systemic acquired resistance | 3.16E-03 |
| 30 | GO:0006811: ion transport | 3.76E-03 |
| 31 | GO:0006364: rRNA processing | 6.02E-03 |
| 32 | GO:0006096: glycolytic process | 6.76E-03 |
| 33 | GO:0042545: cell wall modification | 7.53E-03 |
| 34 | GO:0045490: pectin catabolic process | 1.13E-02 |
| 35 | GO:0009451: RNA modification | 1.15E-02 |
| 36 | GO:0008380: RNA splicing | 1.28E-02 |
| 37 | GO:0006970: response to osmotic stress | 1.62E-02 |
| 38 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 1.83E-02 |
| 39 | GO:0046777: protein autophosphorylation | 1.88E-02 |
| 40 | GO:0009793: embryo development ending in seed dormancy | 2.07E-02 |
| 41 | GO:0006281: DNA repair | 2.36E-02 |
| 42 | GO:0009408: response to heat | 2.36E-02 |
| 43 | GO:0055085: transmembrane transport | 4.21E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0034335: DNA supercoiling activity | 1.87E-05 |
| 2 | GO:0015434: cadmium-transporting ATPase activity | 4.85E-05 |
| 3 | GO:0008551: cadmium-exporting ATPase activity | 4.85E-05 |
| 4 | GO:0016463: zinc-exporting ATPase activity | 4.85E-05 |
| 5 | GO:0003916: DNA topoisomerase activity | 1.30E-04 |
| 6 | GO:0052623: ADP dimethylallyltransferase activity | 2.30E-04 |
| 7 | GO:0052622: ATP dimethylallyltransferase activity | 2.30E-04 |
| 8 | GO:0000293: ferric-chelate reductase activity | 2.85E-04 |
| 9 | GO:0009824: AMP dimethylallyltransferase activity | 2.85E-04 |
| 10 | GO:0000150: recombinase activity | 4.02E-04 |
| 11 | GO:0000400: four-way junction DNA binding | 4.64E-04 |
| 12 | GO:0017056: structural constituent of nuclear pore | 4.64E-04 |
| 13 | GO:0004520: endodeoxyribonuclease activity | 4.64E-04 |
| 14 | GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity | 5.27E-04 |
| 15 | GO:0008026: ATP-dependent helicase activity | 5.76E-04 |
| 16 | GO:0004743: pyruvate kinase activity | 6.61E-04 |
| 17 | GO:0005487: nucleocytoplasmic transporter activity | 6.61E-04 |
| 18 | GO:0030955: potassium ion binding | 6.61E-04 |
| 19 | GO:0008559: xenobiotic-transporting ATPase activity | 8.02E-04 |
| 20 | GO:0009982: pseudouridine synthase activity | 9.49E-04 |
| 21 | GO:0008094: DNA-dependent ATPase activity | 1.44E-03 |
| 22 | GO:0003727: single-stranded RNA binding | 1.70E-03 |
| 23 | GO:0005524: ATP binding | 1.85E-03 |
| 24 | GO:0003684: damaged DNA binding | 2.61E-03 |
| 25 | GO:0004004: ATP-dependent RNA helicase activity | 3.28E-03 |
| 26 | GO:0003697: single-stranded DNA binding | 4.13E-03 |
| 27 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 6.02E-03 |
| 28 | GO:0003690: double-stranded DNA binding | 6.17E-03 |
| 29 | GO:0045330: aspartyl esterase activity | 6.46E-03 |
| 30 | GO:0030599: pectinesterase activity | 7.38E-03 |
| 31 | GO:0003779: actin binding | 7.53E-03 |
| 32 | GO:0019843: rRNA binding | 8.99E-03 |
| 33 | GO:0046983: protein dimerization activity | 1.19E-02 |
| 34 | GO:0004672: protein kinase activity | 1.31E-02 |
| 35 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 1.34E-02 |
| 36 | GO:0000287: magnesium ion binding | 1.52E-02 |
| 37 | GO:0003723: RNA binding | 1.69E-02 |
| 38 | GO:0003924: GTPase activity | 2.36E-02 |
| 39 | GO:0004519: endonuclease activity | 2.51E-02 |
| 40 | GO:0003677: DNA binding | 3.08E-02 |
| 41 | GO:0046872: metal ion binding | 3.83E-02 |
| 42 | GO:0004674: protein serine/threonine kinase activity | 4.39E-02 |
| 43 | GO:0016301: kinase activity | 4.39E-02 |