GO Enrichment Analysis of Co-expressed Genes with
AT3G20260
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0045014: negative regulation of transcription by glucose | 0.00E+00 |
| 2 | GO:0090322: regulation of superoxide metabolic process | 0.00E+00 |
| 3 | GO:0080127: fruit septum development | 0.00E+00 |
| 4 | GO:0046486: glycerolipid metabolic process | 0.00E+00 |
| 5 | GO:0019988: charged-tRNA amino acid modification | 0.00E+00 |
| 6 | GO:0046620: regulation of organ growth | 1.37E-04 |
| 7 | GO:0048829: root cap development | 2.95E-04 |
| 8 | GO:0006949: syncytium formation | 2.95E-04 |
| 9 | GO:0009733: response to auxin | 3.81E-04 |
| 10 | GO:0010569: regulation of double-strand break repair via homologous recombination | 4.01E-04 |
| 11 | GO:0048731: system development | 4.01E-04 |
| 12 | GO:0006650: glycerophospholipid metabolic process | 4.01E-04 |
| 13 | GO:2000071: regulation of defense response by callose deposition | 4.01E-04 |
| 14 | GO:1900033: negative regulation of trichome patterning | 4.01E-04 |
| 15 | GO:0080009: mRNA methylation | 4.01E-04 |
| 16 | GO:0010588: cotyledon vascular tissue pattern formation | 4.47E-04 |
| 17 | GO:0046168: glycerol-3-phosphate catabolic process | 6.55E-04 |
| 18 | GO:0006518: peptide metabolic process | 6.55E-04 |
| 19 | GO:0003333: amino acid transmembrane transport | 8.37E-04 |
| 20 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 9.13E-04 |
| 21 | GO:0007276: gamete generation | 9.34E-04 |
| 22 | GO:0006072: glycerol-3-phosphate metabolic process | 9.34E-04 |
| 23 | GO:0045017: glycerolipid biosynthetic process | 9.34E-04 |
| 24 | GO:0009102: biotin biosynthetic process | 9.34E-04 |
| 25 | GO:0006284: base-excision repair | 1.07E-03 |
| 26 | GO:0042127: regulation of cell proliferation | 1.07E-03 |
| 27 | GO:0006221: pyrimidine nucleotide biosynthetic process | 1.24E-03 |
| 28 | GO:0048629: trichome patterning | 1.24E-03 |
| 29 | GO:0080110: sporopollenin biosynthetic process | 1.57E-03 |
| 30 | GO:0016554: cytidine to uridine editing | 1.94E-03 |
| 31 | GO:0042793: transcription from plastid promoter | 1.94E-03 |
| 32 | GO:0003006: developmental process involved in reproduction | 1.94E-03 |
| 33 | GO:0009643: photosynthetic acclimation | 1.94E-03 |
| 34 | GO:0009959: negative gravitropism | 1.94E-03 |
| 35 | GO:0009828: plant-type cell wall loosening | 2.00E-03 |
| 36 | GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity | 2.32E-03 |
| 37 | GO:0010310: regulation of hydrogen peroxide metabolic process | 2.32E-03 |
| 38 | GO:0010103: stomatal complex morphogenesis | 2.74E-03 |
| 39 | GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway | 2.74E-03 |
| 40 | GO:0010374: stomatal complex development | 2.74E-03 |
| 41 | GO:0009787: regulation of abscisic acid-activated signaling pathway | 3.17E-03 |
| 42 | GO:0042255: ribosome assembly | 3.17E-03 |
| 43 | GO:0006353: DNA-templated transcription, termination | 3.17E-03 |
| 44 | GO:0010492: maintenance of shoot apical meristem identity | 3.17E-03 |
| 45 | GO:0007186: G-protein coupled receptor signaling pathway | 3.63E-03 |
| 46 | GO:0001510: RNA methylation | 3.63E-03 |
| 47 | GO:0010052: guard cell differentiation | 3.63E-03 |
| 48 | GO:0006865: amino acid transport | 3.74E-03 |
| 49 | GO:0009734: auxin-activated signaling pathway | 3.78E-03 |
| 50 | GO:0048507: meristem development | 4.10E-03 |
| 51 | GO:0048589: developmental growth | 4.10E-03 |
| 52 | GO:0030001: metal ion transport | 4.45E-03 |
| 53 | GO:1900865: chloroplast RNA modification | 4.60E-03 |
| 54 | GO:0006535: cysteine biosynthetic process from serine | 5.11E-03 |
| 55 | GO:0009682: induced systemic resistance | 5.65E-03 |
| 56 | GO:0008285: negative regulation of cell proliferation | 5.65E-03 |
| 57 | GO:1903507: negative regulation of nucleic acid-templated transcription | 5.65E-03 |
| 58 | GO:0009750: response to fructose | 5.65E-03 |
| 59 | GO:0010216: maintenance of DNA methylation | 5.65E-03 |
| 60 | GO:0031347: regulation of defense response | 6.09E-03 |
| 61 | GO:0012501: programmed cell death | 6.20E-03 |
| 62 | GO:0010582: floral meristem determinacy | 6.20E-03 |
| 63 | GO:0010152: pollen maturation | 6.20E-03 |
| 64 | GO:0009664: plant-type cell wall organization | 6.32E-03 |
| 65 | GO:0010102: lateral root morphogenesis | 6.78E-03 |
| 66 | GO:0048467: gynoecium development | 7.37E-03 |
| 67 | GO:0009887: animal organ morphogenesis | 7.37E-03 |
| 68 | GO:0080188: RNA-directed DNA methylation | 7.98E-03 |
| 69 | GO:0048367: shoot system development | 8.28E-03 |
| 70 | GO:0006636: unsaturated fatty acid biosynthetic process | 8.61E-03 |
| 71 | GO:0009740: gibberellic acid mediated signaling pathway | 9.09E-03 |
| 72 | GO:0080147: root hair cell development | 9.26E-03 |
| 73 | GO:0019344: cysteine biosynthetic process | 9.26E-03 |
| 74 | GO:0006874: cellular calcium ion homeostasis | 9.92E-03 |
| 75 | GO:0010073: meristem maintenance | 9.92E-03 |
| 76 | GO:0006825: copper ion transport | 9.92E-03 |
| 77 | GO:0019953: sexual reproduction | 9.92E-03 |
| 78 | GO:0051726: regulation of cell cycle | 1.02E-02 |
| 79 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 1.20E-02 |
| 80 | GO:0009686: gibberellin biosynthetic process | 1.20E-02 |
| 81 | GO:0048443: stamen development | 1.27E-02 |
| 82 | GO:0010584: pollen exine formation | 1.27E-02 |
| 83 | GO:0080022: primary root development | 1.43E-02 |
| 84 | GO:0008033: tRNA processing | 1.43E-02 |
| 85 | GO:0010087: phloem or xylem histogenesis | 1.43E-02 |
| 86 | GO:0010118: stomatal movement | 1.43E-02 |
| 87 | GO:0010305: leaf vascular tissue pattern formation | 1.50E-02 |
| 88 | GO:0040008: regulation of growth | 1.60E-02 |
| 89 | GO:0009749: response to glucose | 1.66E-02 |
| 90 | GO:0008654: phospholipid biosynthetic process | 1.66E-02 |
| 91 | GO:0045490: pectin catabolic process | 1.68E-02 |
| 92 | GO:0080156: mitochondrial mRNA modification | 1.75E-02 |
| 93 | GO:0071554: cell wall organization or biogenesis | 1.75E-02 |
| 94 | GO:0002229: defense response to oomycetes | 1.75E-02 |
| 95 | GO:0030163: protein catabolic process | 1.91E-02 |
| 96 | GO:0019760: glucosinolate metabolic process | 2.00E-02 |
| 97 | GO:0009639: response to red or far red light | 2.00E-02 |
| 98 | GO:0009416: response to light stimulus | 2.20E-02 |
| 99 | GO:0006355: regulation of transcription, DNA-templated | 2.22E-02 |
| 100 | GO:0009627: systemic acquired resistance | 2.45E-02 |
| 101 | GO:0009826: unidimensional cell growth | 2.50E-02 |
| 102 | GO:0045893: positive regulation of transcription, DNA-templated | 2.62E-02 |
| 103 | GO:0016311: dephosphorylation | 2.64E-02 |
| 104 | GO:0048481: plant ovule development | 2.74E-02 |
| 105 | GO:0007049: cell cycle | 2.90E-02 |
| 106 | GO:0006811: ion transport | 2.94E-02 |
| 107 | GO:0048366: leaf development | 3.06E-02 |
| 108 | GO:0080167: response to karrikin | 3.22E-02 |
| 109 | GO:0009867: jasmonic acid mediated signaling pathway | 3.24E-02 |
| 110 | GO:0009926: auxin polar transport | 3.88E-02 |
| 111 | GO:0009744: response to sucrose | 3.88E-02 |
| 112 | GO:0051707: response to other organism | 3.88E-02 |
| 113 | GO:0006260: DNA replication | 4.45E-02 |
| 114 | GO:0006364: rRNA processing | 4.80E-02 |
| 115 | GO:0048364: root development | 4.93E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016763: transferase activity, transferring pentosyl groups | 0.00E+00 |
| 2 | GO:0004141: dethiobiotin synthase activity | 0.00E+00 |
| 3 | GO:0004015: adenosylmethionine-8-amino-7-oxononanoate transaminase activity | 0.00E+00 |
| 4 | GO:0009899: ent-kaurene synthase activity | 0.00E+00 |
| 5 | GO:0016428: tRNA (cytosine-5-)-methyltransferase activity | 0.00E+00 |
| 6 | GO:0043399: tRNA A64-2'-O-ribosylphosphate transferase activity | 0.00E+00 |
| 7 | GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity | 1.77E-04 |
| 8 | GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity | 4.01E-04 |
| 9 | GO:0042389: omega-3 fatty acid desaturase activity | 4.01E-04 |
| 10 | GO:0004809: tRNA (guanine-N2-)-methyltransferase activity | 4.01E-04 |
| 11 | GO:0016805: dipeptidase activity | 6.55E-04 |
| 12 | GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity | 6.55E-04 |
| 13 | GO:0009041: uridylate kinase activity | 9.34E-04 |
| 14 | GO:0030570: pectate lyase activity | 9.92E-04 |
| 15 | GO:0010328: auxin influx transmembrane transporter activity | 1.24E-03 |
| 16 | GO:0004930: G-protein coupled receptor activity | 1.24E-03 |
| 17 | GO:0010011: auxin binding | 1.24E-03 |
| 18 | GO:0019104: DNA N-glycosylase activity | 1.24E-03 |
| 19 | GO:0008725: DNA-3-methyladenine glycosylase activity | 1.57E-03 |
| 20 | GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding | 2.22E-03 |
| 21 | GO:0016832: aldehyde-lyase activity | 2.32E-03 |
| 22 | GO:0004124: cysteine synthase activity | 2.32E-03 |
| 23 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 3.63E-03 |
| 24 | GO:0003723: RNA binding | 3.95E-03 |
| 25 | GO:0003700: transcription factor activity, sequence-specific DNA binding | 4.84E-03 |
| 26 | GO:0015293: symporter activity | 5.66E-03 |
| 27 | GO:0003725: double-stranded RNA binding | 6.78E-03 |
| 28 | GO:0003690: double-stranded DNA binding | 7.02E-03 |
| 29 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 7.37E-03 |
| 30 | GO:0015171: amino acid transmembrane transporter activity | 7.51E-03 |
| 31 | GO:0005217: intracellular ligand-gated ion channel activity | 7.98E-03 |
| 32 | GO:0004970: ionotropic glutamate receptor activity | 7.98E-03 |
| 33 | GO:0004190: aspartic-type endopeptidase activity | 7.98E-03 |
| 34 | GO:0003714: transcription corepressor activity | 9.26E-03 |
| 35 | GO:0004519: endonuclease activity | 1.18E-02 |
| 36 | GO:0003727: single-stranded RNA binding | 1.27E-02 |
| 37 | GO:0030170: pyridoxal phosphate binding | 1.35E-02 |
| 38 | GO:0005102: receptor binding | 1.35E-02 |
| 39 | GO:0001085: RNA polymerase II transcription factor binding | 1.50E-02 |
| 40 | GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity | 1.50E-02 |
| 41 | GO:0050662: coenzyme binding | 1.58E-02 |
| 42 | GO:0019901: protein kinase binding | 1.66E-02 |
| 43 | GO:0008237: metallopeptidase activity | 2.09E-02 |
| 44 | GO:0005200: structural constituent of cytoskeleton | 2.09E-02 |
| 45 | GO:0016413: O-acetyltransferase activity | 2.18E-02 |
| 46 | GO:0008168: methyltransferase activity | 2.50E-02 |
| 47 | GO:0000287: magnesium ion binding | 2.55E-02 |
| 48 | GO:0043565: sequence-specific DNA binding | 2.75E-02 |
| 49 | GO:0005096: GTPase activator activity | 2.84E-02 |
| 50 | GO:0004222: metalloendopeptidase activity | 2.94E-02 |
| 51 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 2.94E-02 |
| 52 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 3.04E-02 |
| 53 | GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 3.04E-02 |
| 54 | GO:0003993: acid phosphatase activity | 3.35E-02 |
| 55 | GO:0051539: 4 iron, 4 sulfur cluster binding | 3.56E-02 |
| 56 | GO:0043621: protein self-association | 4.11E-02 |
| 57 | GO:0051287: NAD binding | 4.45E-02 |