Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G20250

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0034756: regulation of iron ion transport0.00E+00
2GO:0002084: protein depalmitoylation0.00E+00
3GO:2001253: regulation of histone H3-K36 trimethylation0.00E+00
4GO:0036258: multivesicular body assembly0.00E+00
5GO:0010793: regulation of mRNA export from nucleus0.00E+00
6GO:0046865: terpenoid transport0.00E+00
7GO:0010120: camalexin biosynthetic process2.57E-05
8GO:0009617: response to bacterium2.61E-05
9GO:0006952: defense response3.00E-05
10GO:0010104: regulation of ethylene-activated signaling pathway5.86E-05
11GO:0042742: defense response to bacterium1.50E-04
12GO:0009225: nucleotide-sugar metabolic process1.62E-04
13GO:0006874: cellular calcium ion homeostasis2.53E-04
14GO:0071369: cellular response to ethylene stimulus3.67E-04
15GO:1900056: negative regulation of leaf senescence3.95E-04
16GO:0019673: GDP-mannose metabolic process4.18E-04
17GO:1900384: regulation of flavonol biosynthetic process4.18E-04
18GO:0042868: antisense RNA metabolic process4.18E-04
19GO:0046244: salicylic acid catabolic process4.18E-04
20GO:0031123: RNA 3'-end processing4.18E-04
21GO:0015760: glucose-6-phosphate transport4.18E-04
22GO:0099132: ATP hydrolysis coupled cation transmembrane transport4.18E-04
23GO:0010421: hydrogen peroxide-mediated programmed cell death4.18E-04
24GO:0002143: tRNA wobble position uridine thiolation4.18E-04
25GO:0009700: indole phytoalexin biosynthetic process4.18E-04
26GO:0098789: pre-mRNA cleavage required for polyadenylation4.18E-04
27GO:0010230: alternative respiration4.18E-04
28GO:0006680: glucosylceramide catabolic process4.18E-04
29GO:0007165: signal transduction4.78E-04
30GO:0006623: protein targeting to vacuole6.66E-04
31GO:0008202: steroid metabolic process8.52E-04
32GO:0051252: regulation of RNA metabolic process9.05E-04
33GO:0009156: ribonucleoside monophosphate biosynthetic process9.05E-04
34GO:0035335: peptidyl-tyrosine dephosphorylation9.05E-04
35GO:0080183: response to photooxidative stress9.05E-04
36GO:0015709: thiosulfate transport9.05E-04
37GO:0031204: posttranslational protein targeting to membrane, translocation9.05E-04
38GO:0071422: succinate transmembrane transport9.05E-04
39GO:0046939: nucleotide phosphorylation9.05E-04
40GO:0009805: coumarin biosynthetic process9.05E-04
41GO:1902066: regulation of cell wall pectin metabolic process9.05E-04
42GO:0048569: post-embryonic animal organ development9.05E-04
43GO:0050684: regulation of mRNA processing9.05E-04
44GO:0042853: L-alanine catabolic process9.05E-04
45GO:0008535: respiratory chain complex IV assembly9.05E-04
46GO:0015712: hexose phosphate transport9.05E-04
47GO:0009870: defense response signaling pathway, resistance gene-dependent9.91E-04
48GO:0009682: induced systemic resistance1.14E-03
49GO:0009627: systemic acquired resistance1.32E-03
50GO:0042351: 'de novo' GDP-L-fucose biosynthetic process1.47E-03
51GO:1901672: positive regulation of systemic acquired resistance1.47E-03
52GO:0055074: calcium ion homeostasis1.47E-03
53GO:0035436: triose phosphate transmembrane transport1.47E-03
54GO:0045836: positive regulation of meiotic nuclear division1.47E-03
55GO:0006517: protein deglycosylation1.47E-03
56GO:0071494: cellular response to UV-C1.47E-03
57GO:2001009: regulation of plant-type cell wall cellulose biosynthetic process1.47E-03
58GO:0015692: lead ion transport1.47E-03
59GO:0060968: regulation of gene silencing1.47E-03
60GO:0015714: phosphoenolpyruvate transport1.47E-03
61GO:0080168: abscisic acid transport1.47E-03
62GO:0048586: regulation of long-day photoperiodism, flowering1.47E-03
63GO:0032922: circadian regulation of gene expression1.47E-03
64GO:0071367: cellular response to brassinosteroid stimulus1.47E-03
65GO:0032784: regulation of DNA-templated transcription, elongation1.47E-03
66GO:0017006: protein-tetrapyrrole linkage1.47E-03
67GO:0009407: toxin catabolic process1.83E-03
68GO:0070676: intralumenal vesicle formation2.13E-03
69GO:0055089: fatty acid homeostasis2.13E-03
70GO:0000187: activation of MAPK activity2.13E-03
71GO:0015729: oxaloacetate transport2.13E-03
72GO:0002239: response to oomycetes2.13E-03
73GO:0009584: detection of visible light2.13E-03
74GO:0010731: protein glutathionylation2.13E-03
75GO:0009165: nucleotide biosynthetic process2.86E-03
76GO:0010109: regulation of photosynthesis2.86E-03
77GO:0045227: capsule polysaccharide biosynthetic process2.86E-03
78GO:0033320: UDP-D-xylose biosynthetic process2.86E-03
79GO:0006536: glutamate metabolic process2.86E-03
80GO:0033358: UDP-L-arabinose biosynthetic process2.86E-03
81GO:0010363: regulation of plant-type hypersensitive response2.86E-03
82GO:0000919: cell plate assembly2.86E-03
83GO:0015713: phosphoglycerate transport2.86E-03
84GO:0051707: response to other organism3.02E-03
85GO:0071456: cellular response to hypoxia3.07E-03
86GO:0019748: secondary metabolic process3.07E-03
87GO:0009814: defense response, incompatible interaction3.07E-03
88GO:0010150: leaf senescence3.10E-03
89GO:0006012: galactose metabolic process3.35E-03
90GO:0050832: defense response to fungus3.47E-03
91GO:0009636: response to toxic substance3.51E-03
92GO:0045927: positive regulation of growth3.66E-03
93GO:0071423: malate transmembrane transport3.66E-03
94GO:0006544: glycine metabolic process3.66E-03
95GO:0046283: anthocyanin-containing compound metabolic process3.66E-03
96GO:0042147: retrograde transport, endosome to Golgi3.95E-03
97GO:0035435: phosphate ion transmembrane transport4.52E-03
98GO:0009643: photosynthetic acclimation4.52E-03
99GO:0006561: proline biosynthetic process4.52E-03
100GO:0006563: L-serine metabolic process4.52E-03
101GO:0006777: Mo-molybdopterin cofactor biosynthetic process4.52E-03
102GO:0042732: D-xylose metabolic process4.52E-03
103GO:0060918: auxin transport4.52E-03
104GO:0042176: regulation of protein catabolic process4.52E-03
105GO:0048579: negative regulation of long-day photoperiodism, flowering4.52E-03
106GO:0048544: recognition of pollen4.95E-03
107GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response5.46E-03
108GO:0048280: vesicle fusion with Golgi apparatus5.46E-03
109GO:0002229: defense response to oomycetes5.69E-03
110GO:0006891: intra-Golgi vesicle-mediated transport5.69E-03
111GO:0009626: plant-type hypersensitive response5.94E-03
112GO:0031047: gene silencing by RNA6.08E-03
113GO:0050829: defense response to Gram-negative bacterium6.45E-03
114GO:0010044: response to aluminum ion6.45E-03
115GO:0048528: post-embryonic root development6.45E-03
116GO:0080186: developmental vegetative growth6.45E-03
117GO:0015937: coenzyme A biosynthetic process6.45E-03
118GO:2000014: regulation of endosperm development6.45E-03
119GO:0008272: sulfate transport6.45E-03
120GO:0006904: vesicle docking involved in exocytosis7.34E-03
121GO:2000070: regulation of response to water deprivation7.50E-03
122GO:0006102: isocitrate metabolic process7.50E-03
123GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline7.50E-03
124GO:0006491: N-glycan processing7.50E-03
125GO:0016579: protein deubiquitination7.78E-03
126GO:0010204: defense response signaling pathway, resistance gene-independent8.61E-03
127GO:0009699: phenylpropanoid biosynthetic process8.61E-03
128GO:0006002: fructose 6-phosphate metabolic process8.61E-03
129GO:0001558: regulation of cell growth8.61E-03
130GO:0007186: G-protein coupled receptor signaling pathway8.61E-03
131GO:0006888: ER to Golgi vesicle-mediated transport9.73E-03
132GO:0010112: regulation of systemic acquired resistance9.78E-03
133GO:0048589: developmental growth9.78E-03
134GO:0009058: biosynthetic process9.90E-03
135GO:0035999: tetrahydrofolate interconversion1.10E-02
136GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway1.10E-02
137GO:0043069: negative regulation of programmed cell death1.23E-02
138GO:0006896: Golgi to vacuole transport1.23E-02
139GO:0046686: response to cadmium ion1.23E-02
140GO:0009631: cold acclimation1.25E-02
141GO:0009089: lysine biosynthetic process via diaminopimelate1.36E-02
142GO:0072593: reactive oxygen species metabolic process1.36E-02
143GO:0009751: response to salicylic acid1.48E-02
144GO:0016925: protein sumoylation1.50E-02
145GO:0006890: retrograde vesicle-mediated transport, Golgi to ER1.50E-02
146GO:0006790: sulfur compound metabolic process1.50E-02
147GO:0006887: exocytosis1.63E-02
148GO:2000028: regulation of photoperiodism, flowering1.64E-02
149GO:0009718: anthocyanin-containing compound biosynthetic process1.64E-02
150GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process1.64E-02
151GO:0030048: actin filament-based movement1.64E-02
152GO:0006626: protein targeting to mitochondrion1.64E-02
153GO:0006541: glutamine metabolic process1.79E-02
154GO:0070588: calcium ion transmembrane transport1.94E-02
155GO:0046854: phosphatidylinositol phosphorylation1.94E-02
156GO:0010053: root epidermal cell differentiation1.94E-02
157GO:0042343: indole glucosinolate metabolic process1.94E-02
158GO:0010039: response to iron ion1.94E-02
159GO:0071732: cellular response to nitric oxide1.94E-02
160GO:0006636: unsaturated fatty acid biosynthetic process2.09E-02
161GO:0042538: hyperosmotic salinity response2.23E-02
162GO:0005992: trehalose biosynthetic process2.25E-02
163GO:0006487: protein N-linked glycosylation2.25E-02
164GO:0009116: nucleoside metabolic process2.25E-02
165GO:0051302: regulation of cell division2.42E-02
166GO:0098542: defense response to other organism2.59E-02
167GO:0031408: oxylipin biosynthetic process2.59E-02
168GO:0051321: meiotic cell cycle2.59E-02
169GO:0080092: regulation of pollen tube growth2.76E-02
170GO:0010017: red or far-red light signaling pathway2.76E-02
171GO:2000022: regulation of jasmonic acid mediated signaling pathway2.76E-02
172GO:0030433: ubiquitin-dependent ERAD pathway2.76E-02
173GO:0006096: glycolytic process2.83E-02
174GO:0009625: response to insect2.94E-02
175GO:0010227: floral organ abscission2.94E-02
176GO:0071215: cellular response to abscisic acid stimulus2.94E-02
177GO:0009620: response to fungus3.11E-02
178GO:0016310: phosphorylation3.16E-02
179GO:0008284: positive regulation of cell proliferation3.30E-02
180GO:0010051: xylem and phloem pattern formation3.49E-02
181GO:0009416: response to light stimulus3.53E-02
182GO:0010197: polar nucleus fusion3.68E-02
183GO:0009958: positive gravitropism3.68E-02
184GO:0009960: endosperm development3.68E-02
185GO:0071472: cellular response to salt stress3.68E-02
186GO:0055072: iron ion homeostasis4.07E-02
187GO:0010183: pollen tube guidance4.07E-02
188GO:0009749: response to glucose4.07E-02
189GO:0006468: protein phosphorylation4.19E-02
190GO:0010193: response to ozone4.27E-02
191GO:0000302: response to reactive oxygen species4.27E-02
192GO:0006869: lipid transport4.44E-02
193GO:0009630: gravitropism4.48E-02
194GO:0030163: protein catabolic process4.68E-02
195GO:0071281: cellular response to iron ion4.68E-02
RankGO TermAdjusted P value
1GO:0061605: molybdopterin-synthase adenylyltransferase activity0.00E+00
2GO:0061604: molybdopterin-synthase sulfurtransferase activity0.00E+00
3GO:0051670: inulinase activity0.00E+00
4GO:0008092: cytoskeletal protein binding0.00E+00
5GO:0047720: indoleacetaldoxime dehydratase activity0.00E+00
6GO:0050513: glycoprotein 2-beta-D-xylosyltransferase activity0.00E+00
7GO:0010298: dihydrocamalexic acid decarboxylase activity0.00E+00
8GO:0016301: kinase activity8.14E-07
9GO:0005217: intracellular ligand-gated ion channel activity1.62E-04
10GO:0004970: ionotropic glutamate receptor activity1.62E-04
11GO:0030247: polysaccharide binding1.88E-04
12GO:0005524: ATP binding4.06E-04
13GO:2001147: camalexin binding4.18E-04
14GO:0010285: L,L-diaminopimelate aminotransferase activity4.18E-04
15GO:2001227: quercitrin binding4.18E-04
16GO:0033925: mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity4.18E-04
17GO:0051669: fructan beta-fructosidase activity4.18E-04
18GO:0008446: GDP-mannose 4,6-dehydratase activity4.18E-04
19GO:0000386: second spliceosomal transesterification activity4.18E-04
20GO:0004348: glucosylceramidase activity4.18E-04
21GO:0004633: phosphopantothenoylcysteine decarboxylase activity4.18E-04
22GO:0031219: levanase activity4.18E-04
23GO:0030246: carbohydrate binding5.98E-04
24GO:0008142: oxysterol binding6.03E-04
25GO:0015117: thiosulfate transmembrane transporter activity9.05E-04
26GO:0047443: 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity9.05E-04
27GO:0004566: beta-glucuronidase activity9.05E-04
28GO:0009883: red or far-red light photoreceptor activity9.05E-04
29GO:0052640: salicylic acid glucosyltransferase (glucoside-forming) activity9.05E-04
30GO:0015152: glucose-6-phosphate transmembrane transporter activity9.05E-04
31GO:0008428: ribonuclease inhibitor activity9.05E-04
32GO:0004338: glucan exo-1,3-beta-glucosidase activity9.05E-04
33GO:1901677: phosphate transmembrane transporter activity9.05E-04
34GO:0008020: G-protein coupled photoreceptor activity1.47E-03
35GO:0071917: triose-phosphate transmembrane transporter activity1.47E-03
36GO:0008265: Mo-molybdopterin cofactor sulfurase activity1.47E-03
37GO:0043169: cation binding1.47E-03
38GO:0005310: dicarboxylic acid transmembrane transporter activity1.47E-03
39GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity1.47E-03
40GO:0015141: succinate transmembrane transporter activity1.47E-03
41GO:0043531: ADP binding1.68E-03
42GO:0004867: serine-type endopeptidase inhibitor activity1.87E-03
43GO:0004351: glutamate decarboxylase activity2.13E-03
44GO:0017077: oxidative phosphorylation uncoupler activity2.13E-03
45GO:0004749: ribose phosphate diphosphokinase activity2.13E-03
46GO:0019201: nucleotide kinase activity2.13E-03
47GO:0015131: oxaloacetate transmembrane transporter activity2.13E-03
48GO:0004792: thiosulfate sulfurtransferase activity2.13E-03
49GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity2.13E-03
50GO:0004449: isocitrate dehydrogenase (NAD+) activity2.13E-03
51GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors2.19E-03
52GO:0030170: pyridoxal phosphate binding2.22E-03
53GO:0004930: G-protein coupled receptor activity2.86E-03
54GO:0009916: alternative oxidase activity2.86E-03
55GO:0015120: phosphoglycerate transmembrane transporter activity2.86E-03
56GO:0050373: UDP-arabinose 4-epimerase activity2.86E-03
57GO:0046527: glucosyltransferase activity2.86E-03
58GO:0004576: oligosaccharyl transferase activity2.86E-03
59GO:0004364: glutathione transferase activity2.87E-03
60GO:0008810: cellulase activity3.35E-03
61GO:0004722: protein serine/threonine phosphatase activity3.39E-03
62GO:0004040: amidase activity3.66E-03
63GO:0031386: protein tag3.66E-03
64GO:0004372: glycine hydroxymethyltransferase activity3.66E-03
65GO:0008641: small protein activating enzyme activity3.66E-03
66GO:0045300: acyl-[acyl-carrier-protein] desaturase activity3.66E-03
67GO:0008948: oxaloacetate decarboxylase activity3.66E-03
68GO:0042285: xylosyltransferase activity3.66E-03
69GO:0048040: UDP-glucuronate decarboxylase activity4.52E-03
70GO:0008474: palmitoyl-(protein) hydrolase activity4.52E-03
71GO:0004872: receptor activity5.31E-03
72GO:0004656: procollagen-proline 4-dioxygenase activity5.46E-03
73GO:0003978: UDP-glucose 4-epimerase activity5.46E-03
74GO:0070403: NAD+ binding5.46E-03
75GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity5.46E-03
76GO:0004017: adenylate kinase activity5.46E-03
77GO:0004843: thiol-dependent ubiquitin-specific protease activity5.69E-03
78GO:0043295: glutathione binding6.45E-03
79GO:0004620: phospholipase activity6.45E-03
80GO:0102425: myricetin 3-O-glucosyltransferase activity6.45E-03
81GO:0102360: daphnetin 3-O-glucosyltransferase activity6.45E-03
82GO:0016621: cinnamoyl-CoA reductase activity6.45E-03
83GO:0009881: photoreceptor activity6.45E-03
84GO:0003872: 6-phosphofructokinase activity6.45E-03
85GO:0015140: malate transmembrane transporter activity6.45E-03
86GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity7.34E-03
87GO:0004708: MAP kinase kinase activity7.50E-03
88GO:0004034: aldose 1-epimerase activity7.50E-03
89GO:0047893: flavonol 3-O-glucosyltransferase activity7.50E-03
90GO:0004525: ribonuclease III activity7.50E-03
91GO:0051213: dioxygenase activity8.25E-03
92GO:0030955: potassium ion binding1.10E-02
93GO:0004743: pyruvate kinase activity1.10E-02
94GO:0005509: calcium ion binding1.17E-02
95GO:0046872: metal ion binding1.18E-02
96GO:0030234: enzyme regulator activity1.23E-02
97GO:0004568: chitinase activity1.23E-02
98GO:0016308: 1-phosphatidylinositol-4-phosphate 5-kinase activity1.23E-02
99GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen1.24E-02
100GO:0004674: protein serine/threonine kinase activity1.34E-02
101GO:0008559: xenobiotic-transporting ATPase activity1.36E-02
102GO:0047372: acylglycerol lipase activity1.36E-02
103GO:0005089: Rho guanyl-nucleotide exchange factor activity1.36E-02
104GO:0015116: sulfate transmembrane transporter activity1.50E-02
105GO:0016740: transferase activity1.60E-02
106GO:0005315: inorganic phosphate transmembrane transporter activity1.64E-02
107GO:0000155: phosphorelay sensor kinase activity1.64E-02
108GO:0005388: calcium-transporting ATPase activity1.64E-02
109GO:0004565: beta-galactosidase activity1.64E-02
110GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism1.64E-02
111GO:0003774: motor activity1.79E-02
112GO:0031624: ubiquitin conjugating enzyme binding1.79E-02
113GO:0042973: glucan endo-1,3-beta-D-glucosidase activity1.79E-02
114GO:0042626: ATPase activity, coupled to transmembrane movement of substances1.89E-02
115GO:0035091: phosphatidylinositol binding1.92E-02
116GO:0003712: transcription cofactor activity1.94E-02
117GO:0004725: protein tyrosine phosphatase activity2.09E-02
118GO:0031418: L-ascorbic acid binding2.25E-02
119GO:0043130: ubiquitin binding2.25E-02
120GO:0005516: calmodulin binding2.28E-02
121GO:0000287: magnesium ion binding2.37E-02
122GO:0035251: UDP-glucosyltransferase activity2.59E-02
123GO:0036459: thiol-dependent ubiquitinyl hydrolase activity2.59E-02
124GO:0031625: ubiquitin protein ligase binding2.65E-02
125GO:0045735: nutrient reservoir activity2.83E-02
126GO:0003727: single-stranded RNA binding3.11E-02
127GO:0080043: quercetin 3-O-glucosyltransferase activity3.11E-02
128GO:0080044: quercetin 7-O-glucosyltransferase activity3.11E-02
129GO:0004499: N,N-dimethylaniline monooxygenase activity3.11E-02
130GO:0022857: transmembrane transporter activity3.21E-02
131GO:0047134: protein-disulfide reductase activity3.30E-02
132GO:0015035: protein disulfide oxidoreductase activity3.50E-02
133GO:0005506: iron ion binding3.65E-02
134GO:0030276: clathrin binding3.68E-02
135GO:0004791: thioredoxin-disulfide reductase activity3.87E-02
136GO:0016853: isomerase activity3.87E-02
137GO:0010181: FMN binding3.87E-02
138GO:0016758: transferase activity, transferring hexosyl groups4.14E-02
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Gene type



Gene DE type