co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G19990

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010401: pectic galactan metabolic process	0.00E+00
2	GO:0006497: protein lipidation	0.00E+00
3	GO:0072722: response to amitrole	0.00E+00
4	GO:0010055: atrichoblast differentiation	0.00E+00
5	GO:0017186: peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase	0.00E+00
6	GO:0006858: extracellular transport	0.00E+00
7	GO:0043620: regulation of DNA-templated transcription in response to stress	0.00E+00
8	GO:0043132: NAD transport	2.19E-06
9	GO:0090630: activation of GTPase activity	8.00E-06
10	GO:0003006: developmental process involved in reproduction	7.90E-05
11	GO:0006680: glucosylceramide catabolic process	2.16E-04
12	GO:0032491: detection of molecule of fungal origin	2.16E-04
13	GO:0031338: regulation of vesicle fusion	2.16E-04
14	GO:0060862: negative regulation of floral organ abscission	2.16E-04
15	GO:0032107: regulation of response to nutrient levels	2.16E-04
16	GO:0080120: CAAX-box protein maturation	2.16E-04
17	GO:1902600: hydrogen ion transmembrane transport	2.16E-04
18	GO:0071586: CAAX-box protein processing	2.16E-04
19	GO:0016337: single organismal cell-cell adhesion	2.16E-04
20	GO:0035352: NAD transmembrane transport	2.16E-04
21	GO:0002240: response to molecule of oomycetes origin	4.81E-04
22	GO:0031349: positive regulation of defense response	4.81E-04
23	GO:1901703: protein localization involved in auxin polar transport	4.81E-04
24	GO:0019725: cellular homeostasis	4.81E-04
25	GO:0051252: regulation of RNA metabolic process	4.81E-04
26	GO:0015012: heparan sulfate proteoglycan biosynthetic process	4.81E-04
27	GO:0042814: monopolar cell growth	4.81E-04
28	GO:0046939: nucleotide phosphorylation	4.81E-04
29	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	4.81E-04
30	GO:0006024: glycosaminoglycan biosynthetic process	4.81E-04
31	GO:0052541: plant-type cell wall cellulose metabolic process	4.81E-04
32	GO:0010102: lateral root morphogenesis	5.83E-04
33	GO:0051176: positive regulation of sulfur metabolic process	7.83E-04
34	GO:0044375: regulation of peroxisome size	7.83E-04
35	GO:0010186: positive regulation of cellular defense response	7.83E-04
36	GO:0010272: response to silver ion	7.83E-04
37	GO:0016998: cell wall macromolecule catabolic process	1.09E-03
38	GO:0015858: nucleoside transport	1.12E-03
39	GO:0048577: negative regulation of short-day photoperiodism, flowering	1.12E-03
40	GO:0032877: positive regulation of DNA endoreduplication	1.12E-03
41	GO:0072334: UDP-galactose transmembrane transport	1.12E-03
42	GO:0010227: floral organ abscission	1.29E-03
43	GO:0000919: cell plate assembly	1.48E-03
44	GO:1990937: xylan acetylation	1.48E-03
45	GO:0060548: negative regulation of cell death	1.48E-03
46	GO:0045227: capsule polysaccharide biosynthetic process	1.48E-03
47	GO:0048638: regulation of developmental growth	1.48E-03
48	GO:0033358: UDP-L-arabinose biosynthetic process	1.48E-03
49	GO:0000304: response to singlet oxygen	1.89E-03
50	GO:0098719: sodium ion import across plasma membrane	1.89E-03
51	GO:0031365: N-terminal protein amino acid modification	1.89E-03
52	GO:0006665: sphingolipid metabolic process	1.89E-03
53	GO:0018344: protein geranylgeranylation	1.89E-03
54	GO:0010183: pollen tube guidance	2.03E-03
55	GO:0060918: auxin transport	2.33E-03
56	GO:0009117: nucleotide metabolic process	2.33E-03
57	GO:0002238: response to molecule of fungal origin	2.33E-03
58	GO:0010942: positive regulation of cell death	2.33E-03
59	GO:0006121: mitochondrial electron transport, succinate to ubiquinone	2.33E-03
60	GO:0010264: myo-inositol hexakisphosphate biosynthetic process	2.33E-03
61	GO:0045736: negative regulation of cyclin-dependent protein serine/threonine kinase activity	2.33E-03
62	GO:0042176: regulation of protein catabolic process	2.33E-03
63	GO:0045454: cell redox homeostasis	2.49E-03
64	GO:0006886: intracellular protein transport	2.61E-03
65	GO:0006914: autophagy	2.62E-03
66	GO:0009567: double fertilization forming a zygote and endosperm	2.62E-03
67	GO:0071805: potassium ion transmembrane transport	2.78E-03
68	GO:0000122: negative regulation of transcription from RNA polymerase II promoter	3.30E-03
69	GO:0009610: response to symbiotic fungus	3.30E-03
70	GO:0007050: cell cycle arrest	3.30E-03
71	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	3.30E-03
72	GO:0006102: isocitrate metabolic process	3.82E-03
73	GO:0010204: defense response signaling pathway, resistance gene-independent	4.38E-03
74	GO:0015780: nucleotide-sugar transport	4.95E-03
75	GO:0007338: single fertilization	4.95E-03
76	GO:0048354: mucilage biosynthetic process involved in seed coat development	5.56E-03
77	GO:0008202: steroid metabolic process	5.56E-03
78	GO:0051453: regulation of intracellular pH	5.56E-03
79	GO:0090332: stomatal closure	5.56E-03
80	GO:0048268: clathrin coat assembly	5.56E-03
81	GO:0006839: mitochondrial transport	5.86E-03
82	GO:0006897: endocytosis	6.11E-03
83	GO:0006032: chitin catabolic process	6.18E-03
84	GO:0000272: polysaccharide catabolic process	6.84E-03
85	GO:0048229: gametophyte development	6.84E-03
86	GO:0030148: sphingolipid biosynthetic process	6.84E-03
87	GO:0071365: cellular response to auxin stimulus	7.51E-03
88	GO:0009555: pollen development	8.18E-03
89	GO:0055046: microgametogenesis	8.22E-03
90	GO:0002237: response to molecule of bacterial origin	8.94E-03
91	GO:0006813: potassium ion transport	8.94E-03
92	GO:0010039: response to iron ion	9.69E-03
93	GO:0009225: nucleotide-sugar metabolic process	9.69E-03
94	GO:0007031: peroxisome organization	9.69E-03
95	GO:0034976: response to endoplasmic reticulum stress	1.05E-02
96	GO:0015031: protein transport	1.07E-02
97	GO:0006511: ubiquitin-dependent protein catabolic process	1.30E-02
98	GO:0016226: iron-sulfur cluster assembly	1.37E-02
99	GO:0080092: regulation of pollen tube growth	1.37E-02
100	GO:0006012: galactose metabolic process	1.46E-02
101	GO:0070417: cellular response to cold	1.64E-02
102	GO:0010087: phloem or xylem histogenesis	1.74E-02
103	GO:0006885: regulation of pH	1.83E-02
104	GO:0048868: pollen tube development	1.83E-02
105	GO:0006814: sodium ion transport	1.93E-02
106	GO:0055072: iron ion homeostasis	2.02E-02
107	GO:0006891: intra-Golgi vesicle-mediated transport	2.12E-02
108	GO:0010150: leaf senescence	2.21E-02
109	GO:0032502: developmental process	2.23E-02
110	GO:0030163: protein catabolic process	2.33E-02
111	GO:0007165: signal transduction	2.48E-02
112	GO:0006904: vesicle docking involved in exocytosis	2.54E-02
113	GO:0009737: response to abscisic acid	2.57E-02
114	GO:0009615: response to virus	2.76E-02
115	GO:0009738: abscisic acid-activated signaling pathway	2.99E-02
116	GO:0009627: systemic acquired resistance	2.99E-02
117	GO:0006950: response to stress	3.10E-02
118	GO:0008219: cell death	3.34E-02
119	GO:0006499: N-terminal protein myristoylation	3.58E-02
120	GO:0006811: ion transport	3.58E-02
121	GO:0009834: plant-type secondary cell wall biogenesis	3.58E-02
122	GO:0048527: lateral root development	3.70E-02
123	GO:0007568: aging	3.70E-02
124	GO:0009910: negative regulation of flower development	3.70E-02
125	GO:0006099: tricarboxylic acid cycle	4.07E-02
126	GO:0055085: transmembrane transport	4.17E-02
127	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	4.38E-02
128	GO:0016192: vesicle-mediated transport	4.45E-02
129	GO:0006887: exocytosis	4.46E-02
130	GO:0046686: response to cadmium ion	4.50E-02
131	GO:0051707: response to other organism	4.73E-02
132	GO:0042546: cell wall biogenesis	4.86E-02
133	GO:0000209: protein polyubiquitination	4.86E-02
134	GO:0008643: carbohydrate transport	5.00E-02

Rank	GO Term	Adjusted P value
1	GO:0051765: inositol tetrakisphosphate kinase activity	0.00E+00
2	GO:0052873: FMN reductase (NADPH) activity	0.00E+00
3	GO:0044610: FMN transmembrane transporter activity	0.00E+00
4	GO:0008752: FMN reductase activity	0.00E+00
5	GO:0016603: glutaminyl-peptide cyclotransferase activity	0.00E+00
6	GO:0018580: nitronate monooxygenase activity	0.00E+00
7	GO:0051766: inositol trisphosphate kinase activity	0.00E+00
8	GO:0051670: inulinase activity	0.00E+00
9	GO:0019779: Atg8 activating enzyme activity	2.19E-06
10	GO:1990585: hydroxyproline O-arabinosyltransferase activity	2.19E-06
11	GO:0051724: NAD transporter activity	2.19E-06
12	GO:0003955: NAD(P)H dehydrogenase (quinone) activity	8.00E-06
13	GO:0051920: peroxiredoxin activity	1.10E-04
14	GO:0004714: transmembrane receptor protein tyrosine kinase activity	1.85E-04
15	GO:0016209: antioxidant activity	1.85E-04
16	GO:0047326: inositol tetrakisphosphate 5-kinase activity	2.16E-04
17	GO:0052631: sphingolipid delta-8 desaturase activity	2.16E-04
18	GO:0000823: inositol-1,4,5-trisphosphate 6-kinase activity	2.16E-04
19	GO:0019786: Atg8-specific protease activity	2.16E-04
20	GO:0004348: glucosylceramidase activity	2.16E-04
21	GO:0015230: FAD transmembrane transporter activity	2.16E-04
22	GO:0031219: levanase activity	2.16E-04
23	GO:0008440: inositol-1,4,5-trisphosphate 3-kinase activity	2.16E-04
24	GO:0000824: inositol tetrakisphosphate 3-kinase activity	2.16E-04
25	GO:0004662: CAAX-protein geranylgeranyltransferase activity	2.16E-04
26	GO:0051669: fructan beta-fructosidase activity	2.16E-04
27	GO:0015386: potassium:proton antiporter activity	4.49E-04
28	GO:0008428: ribonuclease inhibitor activity	4.81E-04
29	GO:0051980: iron-nicotianamine transmembrane transporter activity	4.81E-04
30	GO:0004385: guanylate kinase activity	4.81E-04
31	GO:0047443: 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity	4.81E-04
32	GO:0015228: coenzyme A transmembrane transporter activity	4.81E-04
33	GO:0032934: sterol binding	4.81E-04
34	GO:0008805: carbon-monoxide oxygenase activity	4.81E-04
35	GO:0004175: endopeptidase activity	6.57E-04
36	GO:0042409: caffeoyl-CoA O-methyltransferase activity	7.83E-04
37	GO:0035251: UDP-glucosyltransferase activity	1.09E-03
38	GO:0035529: NADH pyrophosphatase activity	1.12E-03
39	GO:0004449: isocitrate dehydrogenase (NAD+) activity	1.12E-03
40	GO:0022890: inorganic cation transmembrane transporter activity	1.12E-03
41	GO:0052725: inositol-1,3,4-trisphosphate 6-kinase activity	1.12E-03
42	GO:0019201: nucleotide kinase activity	1.12E-03
43	GO:0019776: Atg8 ligase activity	1.48E-03
44	GO:0016004: phospholipase activator activity	1.48E-03
45	GO:0004301: epoxide hydrolase activity	1.48E-03
46	GO:0050373: UDP-arabinose 4-epimerase activity	1.48E-03
47	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	1.48E-03
48	GO:0008948: oxaloacetate decarboxylase activity	1.89E-03
49	GO:0010181: FMN binding	1.89E-03
50	GO:0080122: AMP transmembrane transporter activity	1.89E-03
51	GO:0017137: Rab GTPase binding	1.89E-03
52	GO:0000104: succinate dehydrogenase activity	1.89E-03
53	GO:0047631: ADP-ribose diphosphatase activity	1.89E-03
54	GO:0005459: UDP-galactose transmembrane transporter activity	1.89E-03
55	GO:0015299: solute:proton antiporter activity	1.89E-03
56	GO:0000210: NAD+ diphosphatase activity	2.33E-03
57	GO:1990538: xylan O-acetyltransferase activity	2.33E-03
58	GO:0004861: cyclin-dependent protein serine/threonine kinase inhibitor activity	2.33E-03
59	GO:0015385: sodium:proton antiporter activity	2.46E-03
60	GO:0004017: adenylate kinase activity	2.80E-03
61	GO:0003978: UDP-glucose 4-epimerase activity	2.80E-03
62	GO:0004602: glutathione peroxidase activity	2.80E-03
63	GO:0005347: ATP transmembrane transporter activity	2.80E-03
64	GO:0015217: ADP transmembrane transporter activity	2.80E-03
65	GO:0008320: protein transmembrane transporter activity	3.30E-03
66	GO:0005338: nucleotide-sugar transmembrane transporter activity	3.30E-03
67	GO:0008235: metalloexopeptidase activity	3.30E-03
68	GO:0015297: antiporter activity	3.79E-03
69	GO:0005544: calcium-dependent phospholipid binding	3.82E-03
70	GO:0005096: GTPase activator activity	4.27E-03
71	GO:0008142: oxysterol binding	4.38E-03
72	GO:0071949: FAD binding	4.95E-03
73	GO:0031490: chromatin DNA binding	5.56E-03
74	GO:0004713: protein tyrosine kinase activity	6.18E-03
75	GO:0030234: enzyme regulator activity	6.18E-03
76	GO:0004568: chitinase activity	6.18E-03
77	GO:0008171: O-methyltransferase activity	6.18E-03
78	GO:0005545: 1-phosphatidylinositol binding	6.18E-03
79	GO:0008047: enzyme activator activity	6.18E-03
80	GO:0004177: aminopeptidase activity	6.84E-03
81	GO:0004601: peroxidase activity	7.01E-03
82	GO:0015198: oligopeptide transporter activity	7.51E-03
83	GO:0051287: NAD binding	8.03E-03
84	GO:0008061: chitin binding	9.69E-03
85	GO:0004190: aspartic-type endopeptidase activity	9.69E-03
86	GO:0004867: serine-type endopeptidase inhibitor activity	9.69E-03
87	GO:0001046: core promoter sequence-specific DNA binding	1.12E-02
88	GO:0022857: transmembrane transporter activity	1.20E-02
89	GO:0015079: potassium ion transmembrane transporter activity	1.21E-02
90	GO:0004298: threonine-type endopeptidase activity	1.29E-02
91	GO:0003756: protein disulfide isomerase activity	1.55E-02
92	GO:0047134: protein-disulfide reductase activity	1.64E-02
93	GO:0005451: monovalent cation:proton antiporter activity	1.74E-02
94	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	1.82E-02
95	GO:0005199: structural constituent of cell wall	1.83E-02
96	GO:0030276: clathrin binding	1.83E-02
97	GO:0001085: RNA polymerase II transcription factor binding	1.83E-02
98	GO:0004791: thioredoxin-disulfide reductase activity	1.93E-02
99	GO:0016853: isomerase activity	1.93E-02
100	GO:0016787: hydrolase activity	2.60E-02
101	GO:0016887: ATPase activity	2.63E-02
102	GO:0051213: dioxygenase activity	2.76E-02
103	GO:0016798: hydrolase activity, acting on glycosyl bonds	3.10E-02
104	GO:0004806: triglyceride lipase activity	3.10E-02
105	GO:0016491: oxidoreductase activity	3.53E-02
106	GO:0004222: metalloendopeptidase activity	3.58E-02
107	GO:0030145: manganese ion binding	3.70E-02
108	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	3.70E-02
109	GO:0004497: monooxygenase activity	4.23E-02
110	GO:0035091: phosphatidylinositol binding	5.00E-02