co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G19615

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006487: protein N-linked glycosylation	4.42E-05
2	GO:0006874: cellular calcium ion homeostasis	5.18E-05
3	GO:0006511: ubiquitin-dependent protein catabolic process	1.57E-04
4	GO:0010729: positive regulation of hydrogen peroxide biosynthetic process	1.98E-04
5	GO:0000303: response to superoxide	1.98E-04
6	GO:0010421: hydrogen peroxide-mediated programmed cell death	1.98E-04
7	GO:0007186: G-protein coupled receptor signaling pathway	2.01E-04
8	GO:0080183: response to photooxidative stress	4.43E-04
9	GO:2000072: regulation of defense response to fungus, incompatible interaction	4.43E-04
10	GO:0009805: coumarin biosynthetic process	4.43E-04
11	GO:0006672: ceramide metabolic process	4.43E-04
12	GO:0051788: response to misfolded protein	4.43E-04
13	GO:0015865: purine nucleotide transport	4.43E-04
14	GO:0018345: protein palmitoylation	4.43E-04
15	GO:0009407: toxin catabolic process	4.64E-04
16	GO:0010053: root epidermal cell differentiation	6.52E-04
17	GO:0018342: protein prenylation	7.22E-04
18	GO:0055074: calcium ion homeostasis	7.22E-04
19	GO:0046902: regulation of mitochondrial membrane permeability	1.03E-03
20	GO:0006809: nitric oxide biosynthetic process	1.03E-03
21	GO:0009647: skotomorphogenesis	1.03E-03
22	GO:0001676: long-chain fatty acid metabolic process	1.03E-03
23	GO:0070534: protein K63-linked ubiquitination	1.37E-03
24	GO:0045227: capsule polysaccharide biosynthetic process	1.37E-03
25	GO:0010483: pollen tube reception	1.37E-03
26	GO:0006536: glutamate metabolic process	1.37E-03
27	GO:0033358: UDP-L-arabinose biosynthetic process	1.37E-03
28	GO:0009823: cytokinin catabolic process	1.74E-03
29	GO:0018279: protein N-linked glycosylation via asparagine	1.74E-03
30	GO:0046283: anthocyanin-containing compound metabolic process	1.74E-03
31	GO:0097428: protein maturation by iron-sulfur cluster transfer	1.74E-03
32	GO:0010193: response to ozone	1.92E-03
33	GO:0006301: postreplication repair	2.14E-03
34	GO:0006555: methionine metabolic process	2.14E-03
35	GO:0043248: proteasome assembly	2.14E-03
36	GO:0048579: negative regulation of long-day photoperiodism, flowering	2.14E-03
37	GO:0030163: protein catabolic process	2.18E-03
38	GO:0055114: oxidation-reduction process	2.25E-03
39	GO:0019509: L-methionine salvage from methylthioadenosine	2.57E-03
40	GO:0009612: response to mechanical stimulus	2.57E-03
41	GO:0048528: post-embryonic root development	3.03E-03
42	GO:0015937: coenzyme A biosynthetic process	3.03E-03
43	GO:0031540: regulation of anthocyanin biosynthetic process	3.51E-03
44	GO:0048766: root hair initiation	3.51E-03
45	GO:0046686: response to cadmium ion	3.73E-03
46	GO:0009699: phenylpropanoid biosynthetic process	4.02E-03
47	GO:0009932: cell tip growth	4.02E-03
48	GO:0001510: RNA methylation	4.02E-03
49	GO:0009657: plastid organization	4.02E-03
50	GO:0010120: camalexin biosynthetic process	4.02E-03
51	GO:0010204: defense response signaling pathway, resistance gene-independent	4.02E-03
52	GO:0007166: cell surface receptor signaling pathway	4.07E-03
53	GO:0009617: response to bacterium	4.30E-03
54	GO:0050832: defense response to fungus	4.52E-03
55	GO:0009867: jasmonic acid mediated signaling pathway	4.54E-03
56	GO:0043067: regulation of programmed cell death	5.10E-03
57	GO:0048268: clathrin coat assembly	5.10E-03
58	GO:0043069: negative regulation of programmed cell death	5.67E-03
59	GO:0048765: root hair cell differentiation	6.27E-03
60	GO:0046856: phosphatidylinositol dephosphorylation	6.27E-03
61	GO:0009682: induced systemic resistance	6.27E-03
62	GO:0006790: sulfur compound metabolic process	6.89E-03
63	GO:0012501: programmed cell death	6.89E-03
64	GO:0010102: lateral root morphogenesis	7.52E-03
65	GO:0051603: proteolysis involved in cellular protein catabolic process	8.16E-03
66	GO:0010540: basipetal auxin transport	8.19E-03
67	GO:0009266: response to temperature stimulus	8.19E-03
68	GO:0046854: phosphatidylinositol phosphorylation	8.87E-03
69	GO:0009225: nucleotide-sugar metabolic process	8.87E-03
70	GO:0010039: response to iron ion	8.87E-03
71	GO:0000162: tryptophan biosynthetic process	9.57E-03
72	GO:0010187: negative regulation of seed germination	1.03E-02
73	GO:2000377: regulation of reactive oxygen species metabolic process	1.03E-02
74	GO:0006396: RNA processing	1.16E-02
75	GO:0019748: secondary metabolic process	1.26E-02
76	GO:0009625: response to insect	1.34E-02
77	GO:0010227: floral organ abscission	1.34E-02
78	GO:0006012: galactose metabolic process	1.34E-02
79	GO:0006284: base-excision repair	1.42E-02
80	GO:0009561: megagametogenesis	1.42E-02
81	GO:0016117: carotenoid biosynthetic process	1.50E-02
82	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	1.50E-02
83	GO:0042631: cellular response to water deprivation	1.59E-02
84	GO:0000413: protein peptidyl-prolyl isomerization	1.59E-02
85	GO:0048868: pollen tube development	1.67E-02
86	GO:0006885: regulation of pH	1.67E-02
87	GO:0048544: recognition of pollen	1.76E-02
88	GO:0006623: protein targeting to vacuole	1.85E-02
89	GO:0048825: cotyledon development	1.85E-02
90	GO:0042742: defense response to bacterium	1.96E-02
91	GO:0016032: viral process	2.04E-02
92	GO:0019761: glucosinolate biosynthetic process	2.04E-02
93	GO:0016579: protein deubiquitination	2.42E-02
94	GO:0009816: defense response to bacterium, incompatible interaction	2.63E-02
95	GO:0009416: response to light stimulus	2.66E-02
96	GO:0010411: xyloglucan metabolic process	2.84E-02
97	GO:0008219: cell death	3.05E-02
98	GO:0006499: N-terminal protein myristoylation	3.27E-02
99	GO:0010043: response to zinc ion	3.38E-02
100	GO:0048527: lateral root development	3.38E-02
101	GO:0045087: innate immune response	3.61E-02
102	GO:0006099: tricarboxylic acid cycle	3.73E-02
103	GO:0006897: endocytosis	4.08E-02
104	GO:0006631: fatty acid metabolic process	4.08E-02
105	GO:0006952: defense response	4.22E-02
106	GO:0009926: auxin polar transport	4.32E-02
107	GO:0042546: cell wall biogenesis	4.45E-02
108	GO:0045454: cell redox homeostasis	4.46E-02
109	GO:0009644: response to high light intensity	4.57E-02
110	GO:0009636: response to toxic substance	4.70E-02

Rank	GO Term	Adjusted P value
1	GO:0008418: protein-N-terminal asparagine amidohydrolase activity	0.00E+00
2	GO:0047720: indoleacetaldoxime dehydratase activity	0.00E+00
3	GO:0052684: L-serine hydro-lyase (adding indole, L-tryptophan-forming) activity	0.00E+00
4	GO:0001729: ceramide kinase activity	0.00E+00
5	GO:0005217: intracellular ligand-gated ion channel activity	3.13E-05
6	GO:0004970: ionotropic glutamate receptor activity	3.13E-05
7	GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity	4.65E-05
8	GO:0043295: glutathione binding	1.26E-04
9	GO:2001227: quercitrin binding	1.98E-04
10	GO:0015157: oligosaccharide transmembrane transporter activity	1.98E-04
11	GO:0048037: cofactor binding	1.98E-04
12	GO:0004633: phosphopantothenoylcysteine decarboxylase activity	1.98E-04
13	GO:2001147: camalexin binding	1.98E-04
14	GO:0010297: heteropolysaccharide binding	4.43E-04
15	GO:0052640: salicylic acid glucosyltransferase (glucoside-forming) activity	4.43E-04
16	GO:0004775: succinate-CoA ligase (ADP-forming) activity	4.43E-04
17	GO:0018708: thiol S-methyltransferase activity	4.43E-04
18	GO:0004776: succinate-CoA ligase (GDP-forming) activity	4.43E-04
19	GO:0052692: raffinose alpha-galactosidase activity	7.22E-04
20	GO:0004324: ferredoxin-NADP+ reductase activity	7.22E-04
21	GO:0010309: acireductone dioxygenase [iron(II)-requiring] activity	7.22E-04
22	GO:0004557: alpha-galactosidase activity	7.22E-04
23	GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity	7.22E-04
24	GO:0004364: glutathione transferase activity	7.26E-04
25	GO:0004298: threonine-type endopeptidase activity	9.64E-04
26	GO:0004351: glutamate decarboxylase activity	1.03E-03
27	GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity	1.03E-03
28	GO:0050373: UDP-arabinose 4-epimerase activity	1.37E-03
29	GO:0004834: tryptophan synthase activity	1.37E-03
30	GO:0004930: G-protein coupled receptor activity	1.37E-03
31	GO:0046527: glucosyltransferase activity	1.37E-03
32	GO:0004576: oligosaccharyl transferase activity	1.37E-03
33	GO:0009916: alternative oxidase activity	1.37E-03
34	GO:0008233: peptidase activity	1.52E-03
35	GO:0005471: ATP:ADP antiporter activity	1.74E-03
36	GO:0019139: cytokinin dehydrogenase activity	1.74E-03
37	GO:0051920: peroxiredoxin activity	2.57E-03
38	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	2.57E-03
39	GO:0102391: decanoate--CoA ligase activity	2.57E-03
40	GO:0003950: NAD+ ADP-ribosyltransferase activity	2.57E-03
41	GO:0003978: UDP-glucose 4-epimerase activity	2.57E-03
42	GO:0030246: carbohydrate binding	2.75E-03
43	GO:0004467: long-chain fatty acid-CoA ligase activity	3.03E-03
44	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	3.14E-03
45	GO:0016209: antioxidant activity	3.51E-03
46	GO:0001104: RNA polymerase II transcription cofactor activity	4.02E-03
47	GO:0003951: NAD+ kinase activity	4.02E-03
48	GO:0008173: RNA methyltransferase activity	4.02E-03
49	GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors	4.54E-03
50	GO:0005545: 1-phosphatidylinositol binding	5.67E-03
51	GO:0004601: peroxidase activity	5.98E-03
52	GO:0008327: methyl-CpG binding	6.27E-03
53	GO:0045551: cinnamyl-alcohol dehydrogenase activity	6.89E-03
54	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	7.52E-03
55	GO:0004022: alcohol dehydrogenase (NAD) activity	7.52E-03
56	GO:0004497: monooxygenase activity	7.86E-03
57	GO:0008131: primary amine oxidase activity	8.19E-03
58	GO:0004867: serine-type endopeptidase inhibitor activity	8.87E-03
59	GO:0008134: transcription factor binding	1.03E-02
60	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	1.03E-02
61	GO:0019825: oxygen binding	1.15E-02
62	GO:0036459: thiol-dependent ubiquitinyl hydrolase activity	1.18E-02
63	GO:0008810: cellulase activity	1.34E-02
64	GO:0004499: N,N-dimethylaniline monooxygenase activity	1.42E-02
65	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	1.45E-02
66	GO:0030170: pyridoxal phosphate binding	1.57E-02
67	GO:0005451: monovalent cation:proton antiporter activity	1.59E-02
68	GO:0030276: clathrin binding	1.67E-02
69	GO:0015299: solute:proton antiporter activity	1.76E-02
70	GO:0010181: FMN binding	1.76E-02
71	GO:0004843: thiol-dependent ubiquitin-specific protease activity	1.94E-02
72	GO:0016762: xyloglucan:xyloglucosyl transferase activity	1.94E-02
73	GO:0015385: sodium:proton antiporter activity	2.13E-02
74	GO:0051213: dioxygenase activity	2.53E-02
75	GO:0016798: hydrolase activity, acting on glycosyl bonds	2.84E-02
76	GO:0030247: polysaccharide binding	2.84E-02
77	GO:0005096: GTPase activator activity	3.16E-02
78	GO:0043531: ADP binding	3.31E-02
79	GO:0030145: manganese ion binding	3.38E-02
80	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	3.38E-02
81	GO:0050660: flavin adenine dinucleotide binding	3.49E-02
82	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	3.61E-02
83	GO:0050661: NADP binding	3.96E-02
84	GO:0051539: 4 iron, 4 sulfur cluster binding	3.96E-02
85	GO:0005507: copper ion binding	4.12E-02
86	GO:0051537: 2 iron, 2 sulfur cluster binding	4.57E-02
87	GO:0005198: structural molecule activity	4.70E-02
88	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	4.81E-02
89	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	4.82E-02
90	GO:0005525: GTP binding	4.91E-02