Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G18880

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0061157: mRNA destabilization0.00E+00
2GO:0007037: vacuolar phosphate transport0.00E+00
3GO:0006650: glycerophospholipid metabolic process1.93E-04
4GO:1905011: transmembrane phosphate ion transport from cytosol to vacuole1.93E-04
5GO:0010115: regulation of abscisic acid biosynthetic process1.93E-04
6GO:1900033: negative regulation of trichome patterning1.93E-04
7GO:0042753: positive regulation of circadian rhythm2.16E-04
8GO:0009585: red, far-red light phototransduction2.32E-04
9GO:0009150: purine ribonucleotide metabolic process3.24E-04
10GO:0006164: purine nucleotide biosynthetic process4.66E-04
11GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly4.66E-04
12GO:0048629: trichome patterning6.21E-04
13GO:0045038: protein import into chloroplast thylakoid membrane7.86E-04
14GO:0000741: karyogamy9.59E-04
15GO:0006561: proline biosynthetic process9.59E-04
16GO:0009648: photoperiodism1.14E-03
17GO:0042372: phylloquinone biosynthetic process1.14E-03
18GO:0010078: maintenance of root meristem identity1.54E-03
19GO:0043562: cellular response to nitrogen levels1.76E-03
20GO:0006189: 'de novo' IMP biosynthetic process1.98E-03
21GO:0009638: phototropism2.22E-03
22GO:0000387: spliceosomal snRNP assembly2.22E-03
23GO:0010018: far-red light signaling pathway2.22E-03
24GO:0071577: zinc II ion transmembrane transport2.22E-03
25GO:0009688: abscisic acid biosynthetic process2.46E-03
26GO:0009684: indoleacetic acid biosynthetic process2.71E-03
27GO:0009773: photosynthetic electron transport in photosystem I2.71E-03
28GO:0009750: response to fructose2.71E-03
29GO:0006790: sulfur compound metabolic process2.97E-03
30GO:0010588: cotyledon vascular tissue pattern formation3.24E-03
31GO:0010628: positive regulation of gene expression3.24E-03
32GO:0048467: gynoecium development3.52E-03
33GO:0009733: response to auxin3.60E-03
34GO:0030150: protein import into mitochondrial matrix4.40E-03
35GO:0007010: cytoskeleton organization4.40E-03
36GO:0048511: rhythmic process5.02E-03
37GO:0000271: polysaccharide biosynthetic process6.70E-03
38GO:0080022: primary root development6.70E-03
39GO:0010087: phloem or xylem histogenesis6.70E-03
40GO:0045489: pectin biosynthetic process7.06E-03
41GO:0009958: positive gravitropism7.06E-03
42GO:0010197: polar nucleus fusion7.06E-03
43GO:0010182: sugar mediated signaling pathway7.06E-03
44GO:0048825: cotyledon development7.79E-03
45GO:0008654: phospholipid biosynthetic process7.79E-03
46GO:0009851: auxin biosynthetic process7.79E-03
47GO:0009639: response to red or far red light9.34E-03
48GO:0009627: systemic acquired resistance1.14E-02
49GO:0048527: lateral root development1.41E-02
50GO:0016051: carbohydrate biosynthetic process1.51E-02
51GO:0006839: mitochondrial transport1.65E-02
52GO:0009644: response to high light intensity1.91E-02
53GO:0006855: drug transmembrane transport2.01E-02
54GO:0006812: cation transport2.12E-02
55GO:0048367: shoot system development2.57E-02
56GO:0009908: flower development2.60E-02
57GO:0055085: transmembrane transport3.64E-02
58GO:0006413: translational initiation4.02E-02
59GO:0040008: regulation of growth4.09E-02
60GO:0016310: phosphorylation4.20E-02
61GO:0045490: pectin catabolic process4.23E-02
62GO:0007166: cell surface receptor signaling pathway4.65E-02
RankGO TermAdjusted P value
1GO:0010301: xanthoxin dehydrogenase activity0.00E+00
2GO:0004639: phosphoribosylaminoimidazolesuccinocarboxamide synthase activity0.00E+00
3GO:0008756: o-succinylbenzoate-CoA ligase activity0.00E+00
4GO:0050362: L-tryptophan:2-oxoglutarate aminotransferase activity1.93E-04
5GO:0080097: L-tryptophan:pyruvate aminotransferase activity1.93E-04
6GO:0017172: cysteine dioxygenase activity4.66E-04
7GO:0047627: adenylylsulfatase activity4.66E-04
8GO:0080032: methyl jasmonate esterase activity6.21E-04
9GO:0008374: O-acyltransferase activity7.86E-04
10GO:0016846: carbon-sulfur lyase activity7.86E-04
11GO:0042578: phosphoric ester hydrolase activity9.59E-04
12GO:0016208: AMP binding9.59E-04
13GO:0019899: enzyme binding1.34E-03
14GO:0008327: methyl-CpG binding2.71E-03
15GO:0015266: protein channel activity3.24E-03
16GO:0004022: alcohol dehydrogenase (NAD) activity3.24E-03
17GO:0005385: zinc ion transmembrane transporter activity4.40E-03
18GO:0051087: chaperone binding4.70E-03
19GO:0008324: cation transmembrane transporter activity4.70E-03
20GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity5.34E-03
21GO:0030570: pectate lyase activity5.67E-03
22GO:0008017: microtubule binding5.95E-03
23GO:0003727: single-stranded RNA binding6.01E-03
24GO:0042802: identical protein binding7.22E-03
25GO:0016788: hydrolase activity, acting on ester bonds8.96E-03
26GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity1.27E-02
27GO:0015238: drug transmembrane transporter activity1.32E-02
28GO:0043621: protein self-association1.91E-02
29GO:0003777: microtubule motor activity2.40E-02
30GO:0016746: transferase activity, transferring acyl groups2.93E-02
31GO:0016758: transferase activity, transferring hexosyl groups3.30E-02
32GO:0016829: lyase activity3.56E-02
33GO:0004675: transmembrane receptor protein serine/threonine kinase activity4.02E-02
34GO:0015297: antiporter activity4.09E-02
35GO:0003743: translation initiation factor activity4.72E-02
<
Gene type



Gene DE type