GO Enrichment Analysis of Co-expressed Genes with
AT3G18800
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1905421: regulation of plant organ morphogenesis | 0.00E+00 |
| 2 | GO:0030155: regulation of cell adhesion | 0.00E+00 |
| 3 | GO:0090071: negative regulation of ribosome biogenesis | 0.00E+00 |
| 4 | GO:0051958: methotrexate transport | 0.00E+00 |
| 5 | GO:0097164: ammonium ion metabolic process | 0.00E+00 |
| 6 | GO:0009606: tropism | 0.00E+00 |
| 7 | GO:0002103: endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) | 0.00E+00 |
| 8 | GO:0009734: auxin-activated signaling pathway | 1.99E-07 |
| 9 | GO:0046620: regulation of organ growth | 5.93E-06 |
| 10 | GO:0009658: chloroplast organization | 7.43E-06 |
| 11 | GO:0009657: plastid organization | 8.58E-06 |
| 12 | GO:0009926: auxin polar transport | 1.32E-05 |
| 13 | GO:0010239: chloroplast mRNA processing | 2.67E-05 |
| 14 | GO:0016556: mRNA modification | 2.67E-05 |
| 15 | GO:0042793: transcription from plastid promoter | 1.12E-04 |
| 16 | GO:1901259: chloroplast rRNA processing | 1.53E-04 |
| 17 | GO:0009451: RNA modification | 2.03E-04 |
| 18 | GO:0042255: ribosome assembly | 2.55E-04 |
| 19 | GO:0006353: DNA-templated transcription, termination | 2.55E-04 |
| 20 | GO:0046901: tetrahydrofolylpolyglutamate biosynthetic process | 2.68E-04 |
| 21 | GO:0010480: microsporocyte differentiation | 2.68E-04 |
| 22 | GO:0006436: tryptophanyl-tRNA aminoacylation | 2.68E-04 |
| 23 | GO:0007389: pattern specification process | 3.14E-04 |
| 24 | GO:0032502: developmental process | 3.41E-04 |
| 25 | GO:0000373: Group II intron splicing | 3.80E-04 |
| 26 | GO:0009733: response to auxin | 4.18E-04 |
| 27 | GO:0009875: pollen-pistil interaction | 5.89E-04 |
| 28 | GO:2000123: positive regulation of stomatal complex development | 5.89E-04 |
| 29 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 5.89E-04 |
| 30 | GO:0070981: L-asparagine biosynthetic process | 5.89E-04 |
| 31 | GO:0018026: peptidyl-lysine monomethylation | 5.89E-04 |
| 32 | GO:0009220: pyrimidine ribonucleotide biosynthetic process | 5.89E-04 |
| 33 | GO:1904143: positive regulation of carotenoid biosynthetic process | 5.89E-04 |
| 34 | GO:0006529: asparagine biosynthetic process | 5.89E-04 |
| 35 | GO:0045910: negative regulation of DNA recombination | 9.55E-04 |
| 36 | GO:0048281: inflorescence morphogenesis | 9.55E-04 |
| 37 | GO:0006954: inflammatory response | 9.55E-04 |
| 38 | GO:1902476: chloride transmembrane transport | 1.36E-03 |
| 39 | GO:0051513: regulation of monopolar cell growth | 1.36E-03 |
| 40 | GO:0044211: CTP salvage | 1.36E-03 |
| 41 | GO:0010148: transpiration | 1.36E-03 |
| 42 | GO:0046739: transport of virus in multicellular host | 1.36E-03 |
| 43 | GO:2000904: regulation of starch metabolic process | 1.36E-03 |
| 44 | GO:0016998: cell wall macromolecule catabolic process | 1.46E-03 |
| 45 | GO:0010082: regulation of root meristem growth | 1.74E-03 |
| 46 | GO:0044206: UMP salvage | 1.83E-03 |
| 47 | GO:2000038: regulation of stomatal complex development | 1.83E-03 |
| 48 | GO:0044205: 'de novo' UMP biosynthetic process | 1.83E-03 |
| 49 | GO:0008033: tRNA processing | 2.21E-03 |
| 50 | GO:0010158: abaxial cell fate specification | 2.33E-03 |
| 51 | GO:0010375: stomatal complex patterning | 2.33E-03 |
| 52 | GO:0048497: maintenance of floral organ identity | 2.33E-03 |
| 53 | GO:0009741: response to brassinosteroid | 2.39E-03 |
| 54 | GO:0009646: response to absence of light | 2.56E-03 |
| 55 | GO:0010315: auxin efflux | 2.88E-03 |
| 56 | GO:0006206: pyrimidine nucleobase metabolic process | 2.88E-03 |
| 57 | GO:0018258: protein O-linked glycosylation via hydroxyproline | 2.88E-03 |
| 58 | GO:0009913: epidermal cell differentiation | 2.88E-03 |
| 59 | GO:0006655: phosphatidylglycerol biosynthetic process | 2.88E-03 |
| 60 | GO:0050665: hydrogen peroxide biosynthetic process | 2.88E-03 |
| 61 | GO:0010405: arabinogalactan protein metabolic process | 2.88E-03 |
| 62 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 3.20E-03 |
| 63 | GO:0017148: negative regulation of translation | 3.46E-03 |
| 64 | GO:0009942: longitudinal axis specification | 3.46E-03 |
| 65 | GO:0009854: oxidative photosynthetic carbon pathway | 3.46E-03 |
| 66 | GO:0009416: response to light stimulus | 3.54E-03 |
| 67 | GO:0010252: auxin homeostasis | 3.56E-03 |
| 68 | GO:0009828: plant-type cell wall loosening | 3.56E-03 |
| 69 | GO:0006955: immune response | 4.08E-03 |
| 70 | GO:0010050: vegetative phase change | 4.08E-03 |
| 71 | GO:0048437: floral organ development | 4.08E-03 |
| 72 | GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process | 4.08E-03 |
| 73 | GO:0006821: chloride transport | 4.08E-03 |
| 74 | GO:0070370: cellular heat acclimation | 4.08E-03 |
| 75 | GO:0010444: guard mother cell differentiation | 4.08E-03 |
| 76 | GO:0030307: positive regulation of cell growth | 4.08E-03 |
| 77 | GO:0010103: stomatal complex morphogenesis | 4.08E-03 |
| 78 | GO:0048766: root hair initiation | 4.73E-03 |
| 79 | GO:0070413: trehalose metabolism in response to stress | 4.73E-03 |
| 80 | GO:0001522: pseudouridine synthesis | 4.73E-03 |
| 81 | GO:0009850: auxin metabolic process | 4.73E-03 |
| 82 | GO:0009704: de-etiolation | 4.73E-03 |
| 83 | GO:0009827: plant-type cell wall modification | 5.42E-03 |
| 84 | GO:0010497: plasmodesmata-mediated intercellular transport | 5.42E-03 |
| 85 | GO:0001558: regulation of cell growth | 5.42E-03 |
| 86 | GO:0010204: defense response signaling pathway, resistance gene-independent | 5.42E-03 |
| 87 | GO:0040008: regulation of growth | 5.64E-03 |
| 88 | GO:0006098: pentose-phosphate shunt | 6.14E-03 |
| 89 | GO:0000902: cell morphogenesis | 6.14E-03 |
| 90 | GO:0009793: embryo development ending in seed dormancy | 6.85E-03 |
| 91 | GO:0009638: phototropism | 6.90E-03 |
| 92 | GO:1900865: chloroplast RNA modification | 6.90E-03 |
| 93 | GO:0031425: chloroplast RNA processing | 6.90E-03 |
| 94 | GO:0042761: very long-chain fatty acid biosynthetic process | 6.90E-03 |
| 95 | GO:0008380: RNA splicing | 7.49E-03 |
| 96 | GO:0006298: mismatch repair | 7.68E-03 |
| 97 | GO:0006259: DNA metabolic process | 7.68E-03 |
| 98 | GO:0006535: cysteine biosynthetic process from serine | 7.68E-03 |
| 99 | GO:0006265: DNA topological change | 8.50E-03 |
| 100 | GO:0048229: gametophyte development | 8.50E-03 |
| 101 | GO:0016024: CDP-diacylglycerol biosynthetic process | 9.35E-03 |
| 102 | GO:0045037: protein import into chloroplast stroma | 9.35E-03 |
| 103 | GO:0010582: floral meristem determinacy | 9.35E-03 |
| 104 | GO:0050826: response to freezing | 1.02E-02 |
| 105 | GO:0010075: regulation of meristem growth | 1.02E-02 |
| 106 | GO:0006094: gluconeogenesis | 1.02E-02 |
| 107 | GO:0009767: photosynthetic electron transport chain | 1.02E-02 |
| 108 | GO:2000012: regulation of auxin polar transport | 1.02E-02 |
| 109 | GO:0009785: blue light signaling pathway | 1.02E-02 |
| 110 | GO:0009691: cytokinin biosynthetic process | 1.02E-02 |
| 111 | GO:0009934: regulation of meristem structural organization | 1.11E-02 |
| 112 | GO:0006541: glutamine metabolic process | 1.11E-02 |
| 113 | GO:0010020: chloroplast fission | 1.11E-02 |
| 114 | GO:0010207: photosystem II assembly | 1.11E-02 |
| 115 | GO:0009664: plant-type cell wall organization | 1.14E-02 |
| 116 | GO:0010025: wax biosynthetic process | 1.30E-02 |
| 117 | GO:0080167: response to karrikin | 1.37E-02 |
| 118 | GO:0007275: multicellular organism development | 1.39E-02 |
| 119 | GO:0005992: trehalose biosynthetic process | 1.40E-02 |
| 120 | GO:0019344: cysteine biosynthetic process | 1.40E-02 |
| 121 | GO:0009116: nucleoside metabolic process | 1.40E-02 |
| 122 | GO:0009944: polarity specification of adaxial/abaxial axis | 1.40E-02 |
| 123 | GO:0006096: glycolytic process | 1.45E-02 |
| 124 | GO:0006825: copper ion transport | 1.50E-02 |
| 125 | GO:0051302: regulation of cell division | 1.50E-02 |
| 126 | GO:0006418: tRNA aminoacylation for protein translation | 1.50E-02 |
| 127 | GO:0009553: embryo sac development | 1.69E-02 |
| 128 | GO:0006730: one-carbon metabolic process | 1.71E-02 |
| 129 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 1.82E-02 |
| 130 | GO:0001944: vasculature development | 1.82E-02 |
| 131 | GO:0009742: brassinosteroid mediated signaling pathway | 1.85E-02 |
| 132 | GO:0010091: trichome branching | 1.94E-02 |
| 133 | GO:0048653: anther development | 2.17E-02 |
| 134 | GO:0009958: positive gravitropism | 2.29E-02 |
| 135 | GO:0006662: glycerol ether metabolic process | 2.29E-02 |
| 136 | GO:0048868: pollen tube development | 2.29E-02 |
| 137 | GO:0009058: biosynthetic process | 2.31E-02 |
| 138 | GO:0048364: root development | 2.37E-02 |
| 139 | GO:0007059: chromosome segregation | 2.41E-02 |
| 140 | GO:0006814: sodium ion transport | 2.41E-02 |
| 141 | GO:0009851: auxin biosynthetic process | 2.53E-02 |
| 142 | GO:0010183: pollen tube guidance | 2.53E-02 |
| 143 | GO:0048825: cotyledon development | 2.53E-02 |
| 144 | GO:0008654: phospholipid biosynthetic process | 2.53E-02 |
| 145 | GO:0009790: embryo development | 2.56E-02 |
| 146 | GO:0048510: regulation of timing of transition from vegetative to reproductive phase | 2.65E-02 |
| 147 | GO:0009630: gravitropism | 2.78E-02 |
| 148 | GO:0010583: response to cyclopentenone | 2.78E-02 |
| 149 | GO:0007623: circadian rhythm | 3.02E-02 |
| 150 | GO:0016567: protein ubiquitination | 3.16E-02 |
| 151 | GO:0007267: cell-cell signaling | 3.18E-02 |
| 152 | GO:0006508: proteolysis | 3.21E-02 |
| 153 | GO:0001666: response to hypoxia | 3.45E-02 |
| 154 | GO:0010027: thylakoid membrane organization | 3.45E-02 |
| 155 | GO:0071555: cell wall organization | 3.73E-02 |
| 156 | GO:0010411: xyloglucan metabolic process | 3.88E-02 |
| 157 | GO:0048481: plant ovule development | 4.17E-02 |
| 158 | GO:0048767: root hair elongation | 4.32E-02 |
| 159 | GO:0000160: phosphorelay signal transduction system | 4.32E-02 |
| 160 | GO:0009407: toxin catabolic process | 4.47E-02 |
| 161 | GO:0009826: unidimensional cell growth | 4.49E-02 |
| 162 | GO:0042254: ribosome biogenesis | 4.74E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0015231: 5-formyltetrahydrofolate transporter activity | 0.00E+00 |
| 2 | GO:0004588: orotate phosphoribosyltransferase activity | 0.00E+00 |
| 3 | GO:0004590: orotidine-5'-phosphate decarboxylase activity | 0.00E+00 |
| 4 | GO:0015350: methotrexate transporter activity | 0.00E+00 |
| 5 | GO:0004519: endonuclease activity | 7.59E-06 |
| 6 | GO:0019843: rRNA binding | 9.05E-06 |
| 7 | GO:0042834: peptidoglycan binding | 2.68E-04 |
| 8 | GO:0004008: copper-exporting ATPase activity | 2.68E-04 |
| 9 | GO:0004071: aspartate-ammonia ligase activity | 2.68E-04 |
| 10 | GO:0033946: xyloglucan-specific endo-beta-1,4-glucanase activity | 2.68E-04 |
| 11 | GO:0052381: tRNA dimethylallyltransferase activity | 2.68E-04 |
| 12 | GO:0004830: tryptophan-tRNA ligase activity | 2.68E-04 |
| 13 | GO:0009672: auxin:proton symporter activity | 4.50E-04 |
| 14 | GO:0003723: RNA binding | 5.26E-04 |
| 15 | GO:0004326: tetrahydrofolylpolyglutamate synthase activity | 5.89E-04 |
| 16 | GO:0004066: asparagine synthase (glutamine-hydrolyzing) activity | 5.89E-04 |
| 17 | GO:0008517: folic acid transporter activity | 5.89E-04 |
| 18 | GO:0010329: auxin efflux transmembrane transporter activity | 7.86E-04 |
| 19 | GO:0047334: diphosphate-fructose-6-phosphate 1-phosphotransferase activity | 9.55E-04 |
| 20 | GO:0008508: bile acid:sodium symporter activity | 1.36E-03 |
| 21 | GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity | 1.36E-03 |
| 22 | GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity | 1.36E-03 |
| 23 | GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity | 1.36E-03 |
| 24 | GO:0043023: ribosomal large subunit binding | 1.36E-03 |
| 25 | GO:0004845: uracil phosphoribosyltransferase activity | 1.83E-03 |
| 26 | GO:0019199: transmembrane receptor protein kinase activity | 1.83E-03 |
| 27 | GO:0005253: anion channel activity | 1.83E-03 |
| 28 | GO:0042277: peptide binding | 1.83E-03 |
| 29 | GO:0008891: glycolate oxidase activity | 1.83E-03 |
| 30 | GO:0016279: protein-lysine N-methyltransferase activity | 1.83E-03 |
| 31 | GO:0003727: single-stranded RNA binding | 1.89E-03 |
| 32 | GO:0070696: transmembrane receptor protein serine/threonine kinase binding | 2.33E-03 |
| 33 | GO:0005247: voltage-gated chloride channel activity | 2.88E-03 |
| 34 | GO:0030983: mismatched DNA binding | 2.88E-03 |
| 35 | GO:0004605: phosphatidate cytidylyltransferase activity | 2.88E-03 |
| 36 | GO:1990714: hydroxyproline O-galactosyltransferase activity | 2.88E-03 |
| 37 | GO:0004332: fructose-bisphosphate aldolase activity | 2.88E-03 |
| 38 | GO:0004462: lactoylglutathione lyase activity | 2.88E-03 |
| 39 | GO:0004124: cysteine synthase activity | 3.46E-03 |
| 40 | GO:0008195: phosphatidate phosphatase activity | 3.46E-03 |
| 41 | GO:0004849: uridine kinase activity | 3.46E-03 |
| 42 | GO:0043022: ribosome binding | 4.73E-03 |
| 43 | GO:0005375: copper ion transmembrane transporter activity | 5.42E-03 |
| 44 | GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity | 5.42E-03 |
| 45 | GO:0004805: trehalose-phosphatase activity | 7.68E-03 |
| 46 | GO:0008559: xenobiotic-transporting ATPase activity | 8.50E-03 |
| 47 | GO:0000976: transcription regulatory region sequence-specific DNA binding | 9.35E-03 |
| 48 | GO:0043621: protein self-association | 9.81E-03 |
| 49 | GO:0009982: pseudouridine synthase activity | 1.02E-02 |
| 50 | GO:0004565: beta-galactosidase activity | 1.02E-02 |
| 51 | GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | 1.02E-02 |
| 52 | GO:0005524: ATP binding | 1.15E-02 |
| 53 | GO:0004190: aspartic-type endopeptidase activity | 1.21E-02 |
| 54 | GO:0003690: double-stranded DNA binding | 1.27E-02 |
| 55 | GO:0003777: microtubule motor activity | 1.36E-02 |
| 56 | GO:0004650: polygalacturonase activity | 1.59E-02 |
| 57 | GO:0033612: receptor serine/threonine kinase binding | 1.61E-02 |
| 58 | GO:0004812: aminoacyl-tRNA ligase activity | 2.05E-02 |
| 59 | GO:0047134: protein-disulfide reductase activity | 2.05E-02 |
| 60 | GO:0008536: Ran GTPase binding | 2.29E-02 |
| 61 | GO:0016829: lyase activity | 2.37E-02 |
| 62 | GO:0004791: thioredoxin-disulfide reductase activity | 2.41E-02 |
| 63 | GO:0010181: FMN binding | 2.41E-02 |
| 64 | GO:0019901: protein kinase binding | 2.53E-02 |
| 65 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 2.65E-02 |
| 66 | GO:0000156: phosphorelay response regulator activity | 2.91E-02 |
| 67 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 2.91E-02 |
| 68 | GO:0003684: damaged DNA binding | 3.04E-02 |
| 69 | GO:0016791: phosphatase activity | 3.04E-02 |
| 70 | GO:0016597: amino acid binding | 3.31E-02 |
| 71 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 3.83E-02 |
| 72 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 3.88E-02 |
| 73 | GO:0008236: serine-type peptidase activity | 4.02E-02 |
| 74 | GO:0005215: transporter activity | 4.31E-02 |
| 75 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 4.93E-02 |
| 76 | GO:0003746: translation elongation factor activity | 4.93E-02 |