GO Enrichment Analysis of Co-expressed Genes with
AT3G17668
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009069: serine family amino acid metabolic process | 0.00E+00 |
| 2 | GO:0070979: protein K11-linked ubiquitination | 0.00E+00 |
| 3 | GO:0043488: regulation of mRNA stability | 0.00E+00 |
| 4 | GO:0070178: D-serine metabolic process | 0.00E+00 |
| 5 | GO:0000489: maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) | 0.00E+00 |
| 6 | GO:0000455: enzyme-directed rRNA pseudouridine synthesis | 0.00E+00 |
| 7 | GO:1905177: tracheary element differentiation | 0.00E+00 |
| 8 | GO:0000488: maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) | 0.00E+00 |
| 9 | GO:0009658: chloroplast organization | 3.76E-05 |
| 10 | GO:0009733: response to auxin | 7.81E-05 |
| 11 | GO:0009657: plastid organization | 8.78E-05 |
| 12 | GO:0000476: maturation of 4.5S rRNA | 1.14E-04 |
| 13 | GO:0000967: rRNA 5'-end processing | 1.14E-04 |
| 14 | GO:0051418: microtubule nucleation by microtubule organizing center | 1.14E-04 |
| 15 | GO:0034080: CENP-A containing nucleosome assembly | 1.14E-04 |
| 16 | GO:1900865: chloroplast RNA modification | 1.31E-04 |
| 17 | GO:0006415: translational termination | 1.82E-04 |
| 18 | GO:0034470: ncRNA processing | 2.65E-04 |
| 19 | GO:0033566: gamma-tubulin complex localization | 2.65E-04 |
| 20 | GO:1900871: chloroplast mRNA modification | 2.65E-04 |
| 21 | GO:1900033: negative regulation of trichome patterning | 2.65E-04 |
| 22 | GO:0007052: mitotic spindle organization | 4.38E-04 |
| 23 | GO:0006954: inflammatory response | 4.38E-04 |
| 24 | GO:0031145: anaphase-promoting complex-dependent catabolic process | 4.38E-04 |
| 25 | GO:0043693: monoterpene biosynthetic process | 4.38E-04 |
| 26 | GO:0010623: programmed cell death involved in cell development | 4.38E-04 |
| 27 | GO:0045493: xylan catabolic process | 4.38E-04 |
| 28 | GO:0071398: cellular response to fatty acid | 4.38E-04 |
| 29 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 6.29E-04 |
| 30 | GO:0030071: regulation of mitotic metaphase/anaphase transition | 6.29E-04 |
| 31 | GO:0051639: actin filament network formation | 6.29E-04 |
| 32 | GO:0090307: mitotic spindle assembly | 6.29E-04 |
| 33 | GO:0051415: interphase microtubule nucleation by interphase microtubule organizing center | 6.29E-04 |
| 34 | GO:0034508: centromere complex assembly | 6.29E-04 |
| 35 | GO:0048629: trichome patterning | 8.35E-04 |
| 36 | GO:0051764: actin crosslink formation | 8.35E-04 |
| 37 | GO:0010508: positive regulation of autophagy | 8.35E-04 |
| 38 | GO:0010158: abaxial cell fate specification | 1.05E-03 |
| 39 | GO:0032876: negative regulation of DNA endoreduplication | 1.05E-03 |
| 40 | GO:0040008: regulation of growth | 1.23E-03 |
| 41 | GO:0016554: cytidine to uridine editing | 1.29E-03 |
| 42 | GO:0032973: amino acid export | 1.29E-03 |
| 43 | GO:0006563: L-serine metabolic process | 1.29E-03 |
| 44 | GO:0009734: auxin-activated signaling pathway | 1.47E-03 |
| 45 | GO:0080086: stamen filament development | 1.54E-03 |
| 46 | GO:0043090: amino acid import | 1.81E-03 |
| 47 | GO:0010050: vegetative phase change | 1.81E-03 |
| 48 | GO:0042255: ribosome assembly | 2.09E-03 |
| 49 | GO:0046620: regulation of organ growth | 2.09E-03 |
| 50 | GO:0006353: DNA-templated transcription, termination | 2.09E-03 |
| 51 | GO:0070413: trehalose metabolism in response to stress | 2.09E-03 |
| 52 | GO:0033386: geranylgeranyl diphosphate biosynthetic process | 2.09E-03 |
| 53 | GO:0009850: auxin metabolic process | 2.09E-03 |
| 54 | GO:0009704: de-etiolation | 2.09E-03 |
| 55 | GO:0032875: regulation of DNA endoreduplication | 2.09E-03 |
| 56 | GO:0032544: plastid translation | 2.39E-03 |
| 57 | GO:0045337: farnesyl diphosphate biosynthetic process | 2.70E-03 |
| 58 | GO:0080144: amino acid homeostasis | 2.70E-03 |
| 59 | GO:0033384: geranyl diphosphate biosynthetic process | 2.70E-03 |
| 60 | GO:0000373: Group II intron splicing | 2.70E-03 |
| 61 | GO:0000902: cell morphogenesis | 2.70E-03 |
| 62 | GO:0006949: syncytium formation | 3.36E-03 |
| 63 | GO:0009773: photosynthetic electron transport in photosystem I | 3.71E-03 |
| 64 | GO:0045037: protein import into chloroplast stroma | 4.06E-03 |
| 65 | GO:0010582: floral meristem determinacy | 4.06E-03 |
| 66 | GO:0010628: positive regulation of gene expression | 4.43E-03 |
| 67 | GO:0005992: trehalose biosynthetic process | 6.03E-03 |
| 68 | GO:0030150: protein import into mitochondrial matrix | 6.03E-03 |
| 69 | GO:0051017: actin filament bundle assembly | 6.03E-03 |
| 70 | GO:0071555: cell wall organization | 6.11E-03 |
| 71 | GO:0008299: isoprenoid biosynthetic process | 6.45E-03 |
| 72 | GO:0006730: one-carbon metabolic process | 7.34E-03 |
| 73 | GO:0031348: negative regulation of defense response | 7.34E-03 |
| 74 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 7.79E-03 |
| 75 | GO:0009693: ethylene biosynthetic process | 7.79E-03 |
| 76 | GO:0010089: xylem development | 8.26E-03 |
| 77 | GO:0016117: carotenoid biosynthetic process | 8.74E-03 |
| 78 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 8.74E-03 |
| 79 | GO:0000226: microtubule cytoskeleton organization | 9.23E-03 |
| 80 | GO:0000271: polysaccharide biosynthetic process | 9.23E-03 |
| 81 | GO:0008033: tRNA processing | 9.23E-03 |
| 82 | GO:0010087: phloem or xylem histogenesis | 9.23E-03 |
| 83 | GO:0045489: pectin biosynthetic process | 9.73E-03 |
| 84 | GO:0048544: recognition of pollen | 1.02E-02 |
| 85 | GO:0005975: carbohydrate metabolic process | 1.15E-02 |
| 86 | GO:0032502: developmental process | 1.18E-02 |
| 87 | GO:0006464: cellular protein modification process | 1.29E-02 |
| 88 | GO:0009828: plant-type cell wall loosening | 1.29E-02 |
| 89 | GO:0009911: positive regulation of flower development | 1.46E-02 |
| 90 | GO:0009627: systemic acquired resistance | 1.58E-02 |
| 91 | GO:0010411: xyloglucan metabolic process | 1.64E-02 |
| 92 | GO:0006811: ion transport | 1.89E-02 |
| 93 | GO:0045087: innate immune response | 2.09E-02 |
| 94 | GO:0016051: carbohydrate biosynthetic process | 2.09E-02 |
| 95 | GO:0006839: mitochondrial transport | 2.29E-02 |
| 96 | GO:0051707: response to other organism | 2.50E-02 |
| 97 | GO:0008283: cell proliferation | 2.50E-02 |
| 98 | GO:0009926: auxin polar transport | 2.50E-02 |
| 99 | GO:0006397: mRNA processing | 2.67E-02 |
| 100 | GO:0009965: leaf morphogenesis | 2.72E-02 |
| 101 | GO:0009664: plant-type cell wall organization | 2.94E-02 |
| 102 | GO:0006417: regulation of translation | 3.33E-02 |
| 103 | GO:0006357: regulation of transcription from RNA polymerase II promoter | 3.39E-02 |
| 104 | GO:0009620: response to fungus | 3.73E-02 |
| 105 | GO:0006396: RNA processing | 4.06E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0030378: serine racemase activity | 0.00E+00 |
| 2 | GO:0003941: L-serine ammonia-lyase activity | 0.00E+00 |
| 3 | GO:0008721: D-serine ammonia-lyase activity | 0.00E+00 |
| 4 | GO:0061634: alpha-D-xyloside xylohydrolase | 0.00E+00 |
| 5 | GO:0080176: xyloglucan 1,6-alpha-xylosidase activity | 0.00E+00 |
| 6 | GO:0003747: translation release factor activity | 1.08E-04 |
| 7 | GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity | 1.14E-04 |
| 8 | GO:0017118: lipoyltransferase activity | 2.65E-04 |
| 9 | GO:0031418: L-ascorbic acid binding | 3.83E-04 |
| 10 | GO:0052692: raffinose alpha-galactosidase activity | 4.38E-04 |
| 11 | GO:0004557: alpha-galactosidase activity | 4.38E-04 |
| 12 | GO:0016149: translation release factor activity, codon specific | 6.29E-04 |
| 13 | GO:0043015: gamma-tubulin binding | 8.35E-04 |
| 14 | GO:0009044: xylan 1,4-beta-xylosidase activity | 8.35E-04 |
| 15 | GO:0046556: alpha-L-arabinofuranosidase activity | 8.35E-04 |
| 16 | GO:0080030: methyl indole-3-acetate esterase activity | 1.29E-03 |
| 17 | GO:0042578: phosphoric ester hydrolase activity | 1.29E-03 |
| 18 | GO:0003730: mRNA 3'-UTR binding | 1.54E-03 |
| 19 | GO:0004656: procollagen-proline 4-dioxygenase activity | 1.54E-03 |
| 20 | GO:0019899: enzyme binding | 1.81E-03 |
| 21 | GO:0004311: farnesyltranstransferase activity | 2.09E-03 |
| 22 | GO:0003723: RNA binding | 2.32E-03 |
| 23 | GO:0004337: geranyltranstransferase activity | 2.70E-03 |
| 24 | GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity | 2.70E-03 |
| 25 | GO:0004805: trehalose-phosphatase activity | 3.36E-03 |
| 26 | GO:0004161: dimethylallyltranstransferase activity | 3.71E-03 |
| 27 | GO:0008327: methyl-CpG binding | 3.71E-03 |
| 28 | GO:0009982: pseudouridine synthase activity | 4.43E-03 |
| 29 | GO:0015266: protein channel activity | 4.43E-03 |
| 30 | GO:0003725: double-stranded RNA binding | 4.43E-03 |
| 31 | GO:0004089: carbonate dehydratase activity | 4.43E-03 |
| 32 | GO:0004176: ATP-dependent peptidase activity | 6.89E-03 |
| 33 | GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity | 7.34E-03 |
| 34 | GO:0003727: single-stranded RNA binding | 8.26E-03 |
| 35 | GO:0051015: actin filament binding | 1.24E-02 |
| 36 | GO:0016791: phosphatase activity | 1.29E-02 |
| 37 | GO:0016788: hydrolase activity, acting on ester bonds | 1.42E-02 |
| 38 | GO:0030246: carbohydrate binding | 1.47E-02 |
| 39 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 1.77E-02 |
| 40 | GO:0016787: hydrolase activity | 1.93E-02 |
| 41 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 1.96E-02 |
| 42 | GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting | 2.08E-02 |
| 43 | GO:0042393: histone binding | 2.29E-02 |
| 44 | GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding | 2.31E-02 |
| 45 | GO:0043621: protein self-association | 2.65E-02 |
| 46 | GO:0003690: double-stranded DNA binding | 3.17E-02 |
| 47 | GO:0015171: amino acid transmembrane transporter activity | 3.33E-02 |
| 48 | GO:0004650: polygalacturonase activity | 3.73E-02 |
| 49 | GO:0016757: transferase activity, transferring glycosyl groups | 3.80E-02 |
| 50 | GO:0022857: transmembrane transporter activity | 3.81E-02 |
| 51 | GO:0016758: transferase activity, transferring hexosyl groups | 4.58E-02 |
| 52 | GO:0019843: rRNA binding | 4.67E-02 |