co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G16750

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0045014: negative regulation of transcription by glucose	0.00E+00
2	GO:0090627: plant epidermal cell differentiation	0.00E+00
3	GO:0009606: tropism	0.00E+00
4	GO:0090322: regulation of superoxide metabolic process	0.00E+00
5	GO:0080127: fruit septum development	0.00E+00
6	GO:0019988: charged-tRNA amino acid modification	0.00E+00
7	GO:0042794: rRNA transcription from plastid promoter	0.00E+00
8	GO:0009733: response to auxin	2.19E-07
9	GO:0046620: regulation of organ growth	4.92E-06
10	GO:0009734: auxin-activated signaling pathway	9.11E-05
11	GO:0042255: ribosome assembly	2.28E-04
12	GO:0006353: DNA-templated transcription, termination	2.28E-04
13	GO:1903866: palisade mesophyll development	2.48E-04
14	GO:0033206: meiotic cytokinesis	2.48E-04
15	GO:0015904: tetracycline transport	2.48E-04
16	GO:0048829: root cap development	4.74E-04
17	GO:0010569: regulation of double-strand break repair via homologous recombination	5.49E-04
18	GO:2000071: regulation of defense response by callose deposition	5.49E-04
19	GO:1900033: negative regulation of trichome patterning	5.49E-04
20	GO:0080009: mRNA methylation	5.49E-04
21	GO:2000123: positive regulation of stomatal complex development	5.49E-04
22	GO:0010588: cotyledon vascular tissue pattern formation	7.09E-04
23	GO:0009416: response to light stimulus	7.44E-04
24	GO:0090391: granum assembly	8.92E-04
25	GO:0006518: peptide metabolic process	8.92E-04
26	GO:0040008: regulation of growth	8.97E-04
27	GO:0080147: root hair cell development	1.09E-03
28	GO:0009926: auxin polar transport	1.14E-03
29	GO:0003333: amino acid transmembrane transport	1.32E-03
30	GO:0006221: pyrimidine nucleotide biosynthetic process	1.70E-03
31	GO:0006284: base-excision repair	1.70E-03
32	GO:2000038: regulation of stomatal complex development	1.70E-03
33	GO:0006808: regulation of nitrogen utilization	1.70E-03
34	GO:0048629: trichome patterning	1.70E-03
35	GO:0010118: stomatal movement	1.99E-03
36	GO:0010375: stomatal complex patterning	2.17E-03
37	GO:0080110: sporopollenin biosynthetic process	2.17E-03
38	GO:0016131: brassinosteroid metabolic process	2.17E-03
39	GO:0080156: mitochondrial mRNA modification	2.64E-03
40	GO:0016554: cytidine to uridine editing	2.67E-03
41	GO:0010315: auxin efflux	2.67E-03
42	GO:0009913: epidermal cell differentiation	2.67E-03
43	GO:1902456: regulation of stomatal opening	2.67E-03
44	GO:0042793: transcription from plastid promoter	2.67E-03
45	GO:0003006: developmental process involved in reproduction	2.67E-03
46	GO:0009643: photosynthetic acclimation	2.67E-03
47	GO:2000033: regulation of seed dormancy process	3.21E-03
48	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	3.21E-03
49	GO:0010310: regulation of hydrogen peroxide metabolic process	3.21E-03
50	GO:0015937: coenzyme A biosynthetic process	3.79E-03
51	GO:0010103: stomatal complex morphogenesis	3.79E-03
52	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	3.79E-03
53	GO:0010374: stomatal complex development	3.79E-03
54	GO:0032259: methylation	4.37E-03
55	GO:0009787: regulation of abscisic acid-activated signaling pathway	4.39E-03
56	GO:0048766: root hair initiation	4.39E-03
57	GO:0009938: negative regulation of gibberellic acid mediated signaling pathway	4.39E-03
58	GO:0007186: G-protein coupled receptor signaling pathway	5.03E-03
59	GO:0010233: phloem transport	5.03E-03
60	GO:0010052: guard cell differentiation	5.03E-03
61	GO:0007389: pattern specification process	5.03E-03
62	GO:0048507: meristem development	5.70E-03
63	GO:0048589: developmental growth	5.70E-03
64	GO:0006865: amino acid transport	6.02E-03
65	GO:0009867: jasmonic acid mediated signaling pathway	6.30E-03
66	GO:1900865: chloroplast RNA modification	6.40E-03
67	GO:0009870: defense response signaling pathway, resistance gene-dependent	7.12E-03
68	GO:0006535: cysteine biosynthetic process from serine	7.12E-03
69	GO:0030001: metal ion transport	7.18E-03
70	GO:0009682: induced systemic resistance	7.88E-03
71	GO:0009750: response to fructose	7.88E-03
72	GO:0010216: maintenance of DNA methylation	7.88E-03
73	GO:0010582: floral meristem determinacy	8.66E-03
74	GO:0010152: pollen maturation	8.66E-03
75	GO:0010102: lateral root morphogenesis	9.47E-03
76	GO:0030048: actin filament-based movement	9.47E-03
77	GO:0046274: lignin catabolic process	9.47E-03
78	GO:0048467: gynoecium development	1.03E-02
79	GO:0006270: DNA replication initiation	1.03E-02
80	GO:0080188: RNA-directed DNA methylation	1.12E-02
81	GO:0006636: unsaturated fatty acid biosynthetic process	1.21E-02
82	GO:0009863: salicylic acid mediated signaling pathway	1.30E-02
83	GO:0010187: negative regulation of seed germination	1.30E-02
84	GO:2000377: regulation of reactive oxygen species metabolic process	1.30E-02
85	GO:0019344: cysteine biosynthetic process	1.30E-02
86	GO:0048367: shoot system development	1.34E-02
87	GO:0006874: cellular calcium ion homeostasis	1.39E-02
88	GO:0010073: meristem maintenance	1.39E-02
89	GO:0006825: copper ion transport	1.39E-02
90	GO:0009740: gibberellic acid mediated signaling pathway	1.47E-02
91	GO:2000022: regulation of jasmonic acid mediated signaling pathway	1.59E-02
92	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	1.69E-02
93	GO:0010082: regulation of root meristem growth	1.69E-02
94	GO:0010584: pollen exine formation	1.79E-02
95	GO:0048443: stamen development	1.79E-02
96	GO:0080022: primary root development	2.01E-02
97	GO:0008033: tRNA processing	2.01E-02
98	GO:0010087: phloem or xylem histogenesis	2.01E-02
99	GO:0010268: brassinosteroid homeostasis	2.12E-02
100	GO:0010305: leaf vascular tissue pattern formation	2.12E-02
101	GO:0009958: positive gravitropism	2.12E-02
102	GO:0009741: response to brassinosteroid	2.12E-02
103	GO:0007018: microtubule-based movement	2.23E-02
104	GO:0048825: cotyledon development	2.34E-02
105	GO:0009749: response to glucose	2.34E-02
106	GO:0071554: cell wall organization or biogenesis	2.46E-02
107	GO:0002229: defense response to oomycetes	2.46E-02
108	GO:0010583: response to cyclopentenone	2.58E-02
109	GO:0019761: glucosinolate biosynthetic process	2.58E-02
110	GO:0032502: developmental process	2.58E-02
111	GO:0009630: gravitropism	2.58E-02
112	GO:0045490: pectin catabolic process	2.71E-02
113	GO:0010252: auxin homeostasis	2.82E-02
114	GO:0009828: plant-type cell wall loosening	2.82E-02
115	GO:0007267: cell-cell signaling	2.94E-02
116	GO:0009739: response to gibberellin	3.03E-02
117	GO:0007275: multicellular organism development	3.17E-02
118	GO:0010027: thylakoid membrane organization	3.19E-02
119	GO:0008380: RNA splicing	3.24E-02
120	GO:0010029: regulation of seed germination	3.32E-02
121	GO:0048481: plant ovule development	3.86E-02
122	GO:0048767: root hair elongation	4.00E-02
123	GO:0006811: ion transport	4.14E-02
124	GO:0010218: response to far red light	4.14E-02
125	GO:0009658: chloroplast organization	4.19E-02
126	GO:0016310: phosphorylation	4.55E-02

Rank	GO Term	Adjusted P value
1	GO:0043399: tRNA A64-2'-O-ribosylphosphate transferase activity	0.00E+00
2	GO:0016763: transferase activity, transferring pentosyl groups	0.00E+00
3	GO:0071633: dihydroceramidase activity	0.00E+00
4	GO:0004632: phosphopantothenate--cysteine ligase activity	2.48E-04
5	GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity	2.48E-04
6	GO:0008395: steroid hydroxylase activity	2.48E-04
7	GO:0004016: adenylate cyclase activity	2.48E-04
8	GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity	5.49E-04
9	GO:0008805: carbon-monoxide oxygenase activity	5.49E-04
10	GO:0008493: tetracycline transporter activity	5.49E-04
11	GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity	5.49E-04
12	GO:0042389: omega-3 fatty acid desaturase activity	5.49E-04
13	GO:0004809: tRNA (guanine-N2-)-methyltransferase activity	5.49E-04
14	GO:0003725: double-stranded RNA binding	7.09E-04
15	GO:0016805: dipeptidase activity	8.92E-04
16	GO:0009041: uridylate kinase activity	1.27E-03
17	GO:0030570: pectate lyase activity	1.57E-03
18	GO:0010328: auxin influx transmembrane transporter activity	1.70E-03
19	GO:0004930: G-protein coupled receptor activity	1.70E-03
20	GO:0003727: single-stranded RNA binding	1.70E-03
21	GO:0010011: auxin binding	1.70E-03
22	GO:0019104: DNA N-glycosylase activity	1.70E-03
23	GO:0008725: DNA-3-methyladenine glycosylase activity	2.17E-03
24	GO:0003723: RNA binding	2.32E-03
25	GO:0019901: protein kinase binding	2.47E-03
26	GO:0003688: DNA replication origin binding	2.67E-03
27	GO:0004124: cysteine synthase activity	3.21E-03
28	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	4.08E-03
29	GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	5.03E-03
30	GO:0000989: transcription factor activity, transcription factor binding	5.70E-03
31	GO:0009672: auxin:proton symporter activity	6.40E-03
32	GO:0008168: methyltransferase activity	8.66E-03
33	GO:0052716: hydroquinone:oxygen oxidoreductase activity	8.66E-03
34	GO:0043621: protein self-association	8.79E-03
35	GO:0015293: symporter activity	9.14E-03
36	GO:0010329: auxin efflux transmembrane transporter activity	9.47E-03
37	GO:0004022: alcohol dehydrogenase (NAD) activity	9.47E-03
38	GO:0003774: motor activity	1.03E-02
39	GO:0005217: intracellular ligand-gated ion channel activity	1.12E-02
40	GO:0004970: ionotropic glutamate receptor activity	1.12E-02
41	GO:0003690: double-stranded DNA binding	1.14E-02
42	GO:0015171: amino acid transmembrane transporter activity	1.22E-02
43	GO:0003700: transcription factor activity, sequence-specific DNA binding	1.52E-02
44	GO:0019843: rRNA binding	1.96E-02
45	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	2.02E-02
46	GO:0001085: RNA polymerase II transcription factor binding	2.12E-02
47	GO:0004519: endonuclease activity	2.18E-02
48	GO:0010181: FMN binding	2.23E-02
49	GO:0050662: coenzyme binding	2.23E-02
50	GO:0004518: nuclease activity	2.58E-02
51	GO:0016722: oxidoreductase activity, oxidizing metal ions	2.94E-02
52	GO:0008237: metallopeptidase activity	2.94E-02
53	GO:0005200: structural constituent of cytoskeleton	2.94E-02
54	GO:0016413: O-acetyltransferase activity	3.07E-02
55	GO:0051213: dioxygenase activity	3.19E-02
56	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	3.72E-02
57	GO:0005096: GTPase activator activity	4.00E-02
58	GO:0004222: metalloendopeptidase activity	4.14E-02
59	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	4.14E-02
60	GO:0016788: hydrolase activity, acting on ester bonds	4.26E-02
61	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	4.28E-02
62	GO:0003677: DNA binding	4.51E-02
63	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	4.56E-02