co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G15354

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1901918: negative regulation of exoribonuclease activity	0.00E+00
2	GO:0033231: carbohydrate export	0.00E+00
3	GO:2000042: negative regulation of double-strand break repair via homologous recombination	0.00E+00
4	GO:0006573: valine metabolic process	0.00E+00
5	GO:0046471: phosphatidylglycerol metabolic process	0.00E+00
6	GO:0009661: chromoplast organization	0.00E+00
7	GO:1905157: positive regulation of photosynthesis	0.00E+00
8	GO:0009704: de-etiolation	2.28E-04
9	GO:0019510: S-adenosylhomocysteine catabolic process	2.48E-04
10	GO:1902334: fructose export from vacuole to cytoplasm	2.48E-04
11	GO:0015755: fructose transport	2.48E-04
12	GO:0051180: vitamin transport	2.48E-04
13	GO:0030974: thiamine pyrophosphate transport	2.48E-04
14	GO:0046467: membrane lipid biosynthetic process	2.48E-04
15	GO:0046900: tetrahydrofolylpolyglutamate metabolic process	2.48E-04
16	GO:1902025: nitrate import	2.48E-04
17	GO:0071277: cellular response to calcium ion	2.48E-04
18	GO:0006551: leucine metabolic process	2.48E-04
19	GO:0042371: vitamin K biosynthetic process	2.48E-04
20	GO:0046167: glycerol-3-phosphate biosynthetic process	2.48E-04
21	GO:0043007: maintenance of rDNA	2.48E-04
22	GO:0090548: response to nitrate starvation	2.48E-04
23	GO:0009821: alkaloid biosynthetic process	3.41E-04
24	GO:0033353: S-adenosylmethionine cycle	5.49E-04
25	GO:0006898: receptor-mediated endocytosis	5.49E-04
26	GO:0015893: drug transport	5.49E-04
27	GO:0006650: glycerophospholipid metabolic process	5.49E-04
28	GO:1904143: positive regulation of carotenoid biosynthetic process	5.49E-04
29	GO:0010207: photosystem II assembly	7.98E-04
30	GO:0055114: oxidation-reduction process	8.38E-04
31	GO:0015714: phosphoenolpyruvate transport	8.92E-04
32	GO:0046168: glycerol-3-phosphate catabolic process	8.92E-04
33	GO:0006696: ergosterol biosynthetic process	8.92E-04
34	GO:0006081: cellular aldehyde metabolic process	8.92E-04
35	GO:0006636: unsaturated fatty acid biosynthetic process	9.89E-04
36	GO:0006072: glycerol-3-phosphate metabolic process	1.27E-03
37	GO:0042823: pyridoxal phosphate biosynthetic process	1.27E-03
38	GO:0071484: cellular response to light intensity	1.27E-03
39	GO:0015689: molybdate ion transport	1.70E-03
40	GO:0006183: GTP biosynthetic process	1.70E-03
41	GO:0010600: regulation of auxin biosynthetic process	1.70E-03
42	GO:0019722: calcium-mediated signaling	1.70E-03
43	GO:0015713: phosphoglycerate transport	1.70E-03
44	GO:0071483: cellular response to blue light	1.70E-03
45	GO:0009902: chloroplast relocation	1.70E-03
46	GO:0010021: amylopectin biosynthetic process	1.70E-03
47	GO:0015976: carbon utilization	1.70E-03
48	GO:0006857: oligopeptide transport	1.81E-03
49	GO:0006465: signal peptide processing	2.17E-03
50	GO:0016120: carotene biosynthetic process	2.17E-03
51	GO:0009904: chloroplast accumulation movement	2.17E-03
52	GO:0035434: copper ion transmembrane transport	2.17E-03
53	GO:0016123: xanthophyll biosynthetic process	2.17E-03
54	GO:0006086: acetyl-CoA biosynthetic process from pyruvate	2.67E-03
55	GO:0009643: photosynthetic acclimation	2.67E-03
56	GO:0019761: glucosinolate biosynthetic process	2.82E-03
57	GO:0010244: response to low fluence blue light stimulus by blue low-fluence system	3.21E-03
58	GO:0045926: negative regulation of growth	3.21E-03
59	GO:0009082: branched-chain amino acid biosynthetic process	3.21E-03
60	GO:0017148: negative regulation of translation	3.21E-03
61	GO:0009099: valine biosynthetic process	3.21E-03
62	GO:0009903: chloroplast avoidance movement	3.21E-03
63	GO:0009554: megasporogenesis	3.21E-03
64	GO:0009854: oxidative photosynthetic carbon pathway	3.21E-03
65	GO:0010019: chloroplast-nucleus signaling pathway	3.21E-03
66	GO:0007267: cell-cell signaling	3.40E-03
67	GO:1900056: negative regulation of leaf senescence	3.79E-03
68	GO:1900057: positive regulation of leaf senescence	3.79E-03
69	GO:0010161: red light signaling pathway	3.79E-03
70	GO:0032259: methylation	4.37E-03
71	GO:0019827: stem cell population maintenance	4.39E-03
72	GO:0010928: regulation of auxin mediated signaling pathway	4.39E-03
73	GO:0009690: cytokinin metabolic process	4.39E-03
74	GO:0050821: protein stabilization	4.39E-03
75	GO:0009231: riboflavin biosynthetic process	4.39E-03
76	GO:0015995: chlorophyll biosynthetic process	4.49E-03
77	GO:0010411: xyloglucan metabolic process	4.49E-03
78	GO:0018298: protein-chromophore linkage	4.97E-03
79	GO:0071482: cellular response to light stimulus	5.03E-03
80	GO:0009657: plastid organization	5.03E-03
81	GO:0009097: isoleucine biosynthetic process	5.03E-03
82	GO:0010100: negative regulation of photomorphogenesis	5.03E-03
83	GO:0009932: cell tip growth	5.03E-03
84	GO:0006098: pentose-phosphate shunt	5.70E-03
85	GO:0010206: photosystem II repair	5.70E-03
86	GO:0034765: regulation of ion transmembrane transport	5.70E-03
87	GO:0090333: regulation of stomatal closure	5.70E-03
88	GO:0006754: ATP biosynthetic process	5.70E-03
89	GO:0010205: photoinhibition	6.40E-03
90	GO:0009098: leucine biosynthetic process	6.40E-03
91	GO:0010380: regulation of chlorophyll biosynthetic process	6.40E-03
92	GO:0006995: cellular response to nitrogen starvation	7.12E-03
93	GO:0009688: abscisic acid biosynthetic process	7.12E-03
94	GO:0043085: positive regulation of catalytic activity	7.88E-03
95	GO:0009750: response to fructose	7.88E-03
96	GO:0010114: response to red light	8.13E-03
97	GO:0042546: cell wall biogenesis	8.46E-03
98	GO:0009658: chloroplast organization	9.09E-03
99	GO:0009725: response to hormone	9.47E-03
100	GO:0006094: gluconeogenesis	9.47E-03
101	GO:0009767: photosynthetic electron transport chain	9.47E-03
102	GO:0006541: glutamine metabolic process	1.03E-02
103	GO:0007015: actin filament organization	1.03E-02
104	GO:0010025: wax biosynthetic process	1.21E-02
105	GO:0006863: purine nucleobase transport	1.21E-02
106	GO:0009833: plant-type primary cell wall biogenesis	1.21E-02
107	GO:0019762: glucosinolate catabolic process	1.21E-02
108	GO:0006096: glycolytic process	1.30E-02
109	GO:0043086: negative regulation of catalytic activity	1.30E-02
110	GO:0051017: actin filament bundle assembly	1.30E-02
111	GO:0019953: sexual reproduction	1.39E-02
112	GO:0009768: photosynthesis, light harvesting in photosystem I	1.39E-02
113	GO:0006825: copper ion transport	1.39E-02
114	GO:0031408: oxylipin biosynthetic process	1.49E-02
115	GO:0051260: protein homooligomerization	1.49E-02
116	GO:0030245: cellulose catabolic process	1.59E-02
117	GO:0010017: red or far-red light signaling pathway	1.59E-02
118	GO:0006730: one-carbon metabolic process	1.59E-02
119	GO:0030433: ubiquitin-dependent ERAD pathway	1.59E-02
120	GO:0006396: RNA processing	1.61E-02
121	GO:0006869: lipid transport	1.69E-02
122	GO:0006817: phosphate ion transport	1.79E-02
123	GO:0009306: protein secretion	1.79E-02
124	GO:0016042: lipid catabolic process	1.89E-02
125	GO:0016117: carotenoid biosynthetic process	1.90E-02
126	GO:0070417: cellular response to cold	1.90E-02
127	GO:0006810: transport	1.94E-02
128	GO:0042391: regulation of membrane potential	2.01E-02
129	GO:0009058: biosynthetic process	2.07E-02
130	GO:0010197: polar nucleus fusion	2.12E-02
131	GO:0010182: sugar mediated signaling pathway	2.12E-02
132	GO:0048868: pollen tube development	2.12E-02
133	GO:0009741: response to brassinosteroid	2.12E-02
134	GO:0008152: metabolic process	2.22E-02
135	GO:0007059: chromosome segregation	2.23E-02
136	GO:0009646: response to absence of light	2.23E-02
137	GO:0019252: starch biosynthetic process	2.34E-02
138	GO:0008654: phospholipid biosynthetic process	2.34E-02
139	GO:0007264: small GTPase mediated signal transduction	2.58E-02
140	GO:0010583: response to cyclopentenone	2.58E-02
141	GO:0032502: developmental process	2.58E-02
142	GO:0007623: circadian rhythm	2.71E-02
143	GO:0071805: potassium ion transmembrane transport	2.94E-02
144	GO:0071555: cell wall organization	3.19E-02
145	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	3.32E-02
146	GO:0042128: nitrate assimilation	3.46E-02
147	GO:0030244: cellulose biosynthetic process	3.86E-02
148	GO:0009813: flavonoid biosynthetic process	4.00E-02
149	GO:0000160: phosphorelay signal transduction system	4.00E-02
150	GO:0006499: N-terminal protein myristoylation	4.14E-02
151	GO:0010218: response to far red light	4.14E-02
152	GO:0009910: negative regulation of flower development	4.28E-02
153	GO:0009853: photorespiration	4.56E-02
154	GO:0016051: carbohydrate biosynthetic process	4.56E-02
155	GO:0009637: response to blue light	4.56E-02
156	GO:0034599: cellular response to oxidative stress	4.71E-02

Rank	GO Term	Adjusted P value
1	GO:0030794: (S)-coclaurine-N-methyltransferase activity	0.00E+00
2	GO:0009673: low-affinity phosphate transmembrane transporter activity	0.00E+00
3	GO:0080067: 4-methylthiobutyl-desulfoglucosinolate sulfotransferase activity	0.00E+00
4	GO:0080066: 3-methylthiopropyl-desulfoglucosinolate sulfotransferase activity	0.00E+00
5	GO:0009979: 16:0 monogalactosyldiacylglycerol desaturase activity	0.00E+00
6	GO:0080070: 8-methylthiooctyl-desulfoglucosinolate sulfotransferase activity	0.00E+00
7	GO:0080068: 5-methylthiopentyl-desulfoglucosinolate sulfotransferase activity	0.00E+00
8	GO:0008807: carboxyvinyl-carboxyphosphonate phosphorylmutase activity	0.00E+00
9	GO:0046905: phytoene synthase activity	0.00E+00
10	GO:0080071: indol-3-yl-methyl-desulfoglucosinolate sulfotransferase activity	0.00E+00
11	GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity	0.00E+00
12	GO:0019146: arabinose-5-phosphate isomerase activity	0.00E+00
13	GO:0015284: fructose uniporter activity	0.00E+00
14	GO:0035798: 2-alkenal reductase (NADP+) activity	0.00E+00
15	GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity	0.00E+00
16	GO:0009540: zeaxanthin epoxidase [overall] activity	0.00E+00
17	GO:0052637: delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase activity	0.00E+00
18	GO:0080069: 7-methylthioheptyl-desulfoglucosinolate sulfotransferase activity	0.00E+00
19	GO:0018708: thiol S-methyltransferase activity	2.86E-06
20	GO:0004451: isocitrate lyase activity	2.48E-04
21	GO:0090422: thiamine pyrophosphate transporter activity	2.48E-04
22	GO:0004013: adenosylhomocysteinase activity	2.48E-04
23	GO:0015121: phosphoenolpyruvate:phosphate antiporter activity	2.48E-04
24	GO:0016618: hydroxypyruvate reductase activity	2.48E-04
25	GO:0051996: squalene synthase activity	2.48E-04
26	GO:0010313: phytochrome binding	2.48E-04
27	GO:0003984: acetolactate synthase activity	2.48E-04
28	GO:0008242: omega peptidase activity	2.48E-04
29	GO:0035671: enone reductase activity	2.48E-04
30	GO:0046906: tetrapyrrole binding	2.48E-04
31	GO:0016844: strictosidine synthase activity	4.05E-04
32	GO:0016491: oxidoreductase activity	4.73E-04
33	GO:0033201: alpha-1,4-glucan synthase activity	5.49E-04
34	GO:0004802: transketolase activity	5.49E-04
35	GO:0005353: fructose transmembrane transporter activity	5.49E-04
36	GO:0034722: gamma-glutamyl-peptidase activity	5.49E-04
37	GO:0004310: farnesyl-diphosphate farnesyltransferase activity	5.49E-04
38	GO:0047364: desulfoglucosinolate sulfotransferase activity	5.49E-04
39	GO:0008686: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity	5.49E-04
40	GO:0003938: IMP dehydrogenase activity	5.49E-04
41	GO:0004565: beta-galactosidase activity	7.09E-04
42	GO:0008430: selenium binding	8.92E-04
43	GO:0010277: chlorophyllide a oxygenase [overall] activity	8.92E-04
44	GO:0004373: glycogen (starch) synthase activity	8.92E-04
45	GO:0003913: DNA photolyase activity	8.92E-04
46	GO:0003861: 3-isopropylmalate dehydratase activity	8.92E-04
47	GO:0003935: GTP cyclohydrolase II activity	8.92E-04
48	GO:0030267: glyoxylate reductase (NADP) activity	8.92E-04
49	GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity	8.92E-04
50	GO:0004030: aldehyde dehydrogenase [NAD(P)+] activity	8.92E-04
51	GO:0048027: mRNA 5'-UTR binding	1.27E-03
52	GO:0022890: inorganic cation transmembrane transporter activity	1.27E-03
53	GO:0051287: NAD binding	1.45E-03
54	GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity	1.70E-03
55	GO:0080032: methyl jasmonate esterase activity	1.70E-03
56	GO:0009011: starch synthase activity	1.70E-03
57	GO:0015098: molybdate ion transmembrane transporter activity	1.70E-03
58	GO:0042277: peptide binding	1.70E-03
59	GO:0015120: phosphoglycerate transmembrane transporter activity	1.70E-03
60	GO:0016836: hydro-lyase activity	1.70E-03
61	GO:0008168: methyltransferase activity	1.75E-03
62	GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	2.17E-03
63	GO:0048038: quinone binding	2.64E-03
64	GO:0016762: xyloglucan:xyloglucosyl transferase activity	2.64E-03
65	GO:0004332: fructose-bisphosphate aldolase activity	2.67E-03
66	GO:0047714: galactolipase activity	2.67E-03
67	GO:0004029: aldehyde dehydrogenase (NAD) activity	2.67E-03
68	GO:0035673: oligopeptide transmembrane transporter activity	2.67E-03
69	GO:0080030: methyl indole-3-acetate esterase activity	2.67E-03
70	GO:0005242: inward rectifier potassium channel activity	3.21E-03
71	GO:0009881: photoreceptor activity	3.79E-03
72	GO:0019899: enzyme binding	3.79E-03
73	GO:0016798: hydrolase activity, acting on glycosyl bonds	4.49E-03
74	GO:0008970: phosphatidylcholine 1-acylhydrolase activity	5.03E-03
75	GO:0005375: copper ion transmembrane transporter activity	5.03E-03
76	GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	5.03E-03
77	GO:0071949: FAD binding	5.70E-03
78	GO:0000989: transcription factor activity, transcription factor binding	5.70E-03
79	GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism	5.70E-03
80	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	6.40E-03
81	GO:0015020: glucuronosyltransferase activity	7.12E-03
82	GO:0015386: potassium:proton antiporter activity	7.88E-03
83	GO:0019904: protein domain specific binding	7.88E-03
84	GO:0015198: oligopeptide transporter activity	8.66E-03
85	GO:0015293: symporter activity	9.14E-03
86	GO:0016788: hydrolase activity, acting on ester bonds	9.31E-03
87	GO:0005315: inorganic phosphate transmembrane transporter activity	9.47E-03
88	GO:0004089: carbonate dehydratase activity	9.47E-03
89	GO:0031072: heat shock protein binding	9.47E-03
90	GO:0008146: sulfotransferase activity	1.12E-02
91	GO:0051119: sugar transmembrane transporter activity	1.12E-02
92	GO:0005215: transporter activity	1.19E-02
93	GO:0031409: pigment binding	1.21E-02
94	GO:0003954: NADH dehydrogenase activity	1.30E-02
95	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	1.34E-02
96	GO:0052689: carboxylic ester hydrolase activity	1.36E-02
97	GO:0005345: purine nucleobase transmembrane transporter activity	1.39E-02
98	GO:0015079: potassium ion transmembrane transporter activity	1.39E-02
99	GO:0008810: cellulase activity	1.69E-02
100	GO:0016760: cellulose synthase (UDP-forming) activity	1.69E-02
101	GO:0003727: single-stranded RNA binding	1.79E-02
102	GO:0004672: protein kinase activity	1.94E-02
103	GO:0030551: cyclic nucleotide binding	2.01E-02
104	GO:0005249: voltage-gated potassium channel activity	2.01E-02
105	GO:0008080: N-acetyltransferase activity	2.12E-02
106	GO:0015299: solute:proton antiporter activity	2.23E-02
107	GO:0010181: FMN binding	2.23E-02
108	GO:0004872: receptor activity	2.34E-02
109	GO:0046910: pectinesterase inhibitor activity	2.53E-02
110	GO:0004518: nuclease activity	2.58E-02
111	GO:0000156: phosphorelay response regulator activity	2.70E-02
112	GO:0016791: phosphatase activity	2.82E-02
113	GO:0016759: cellulose synthase activity	2.82E-02
114	GO:0016722: oxidoreductase activity, oxidizing metal ions	2.94E-02
115	GO:0016597: amino acid binding	3.07E-02
116	GO:0016168: chlorophyll binding	3.32E-02
117	GO:0042802: identical protein binding	3.44E-02
118	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	3.44E-02
119	GO:0008375: acetylglucosaminyltransferase activity	3.46E-02
120	GO:0004806: triglyceride lipase activity	3.59E-02
121	GO:0004721: phosphoprotein phosphatase activity	3.59E-02
122	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	3.72E-02
123	GO:0030145: manganese ion binding	4.28E-02
124	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	4.56E-02